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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G265700.1 Wheat plasma membrane 97.95 98.27
TraesCS2B01G285400.1 Wheat plasma membrane 97.95 98.06
Zm00001d018614_P003 Maize plastid 75.03 72.68
EER95720 Sorghum plastid 75.57 72.15
Os07t0103100-01 Rice plasma membrane 72.01 69.98
Zm00001d018615_P001 Maize plasma membrane 68.35 66.15
Solyc05g045650.2.1 Tomato plasma membrane 57.8 61.23
EER95721 Sorghum plastid 64.59 61.16
Solyc07g052400.2.1 Tomato cytosol 52.96 60.67
PGSC0003DMT400065539 Potato plasma membrane 59.74 58.98
KRH25388 Soybean plasma membrane 58.23 58.55
VIT_12s0059g02270.t01 Wine grape plasma membrane 58.02 58.33
TraesCS2A01G220700.1 Wheat plasma membrane 58.13 58.19
PGSC0003DMT400013497 Potato plasma membrane 59.1 57.85
TraesCS7A01G455200.1 Wheat plasma membrane 58.13 57.82
KRH56121 Soybean plasma membrane 57.8 57.8
TraesCS1A01G390300.2 Wheat plasma membrane 58.34 57.78
KRH26793 Soybean plasma membrane 57.91 56.81
CDY06165 Canola plasma membrane 52.96 56.49
KRH22559 Soybean plasma membrane 57.37 56.28
Bra015398.1-P Field mustard plasma membrane 56.4 55.1
CDY49512 Canola plasma membrane 56.51 55.09
CDY46839 Canola plasma membrane 56.08 54.78
CDY10044 Canola plasma membrane 55.22 54.63
AT1G05200.1 Thale cress plasma membrane 55.33 53.6
TraesCS2A01G455200.2 Wheat plasma membrane 52.96 53.54
Bra032480.1-P Field mustard plasma membrane 54.79 52.97
Bra005589.1-P Field mustard plasma membrane 53.71 52.8
AT2G32390.5 Thale cress plasma membrane 54.04 52.68
TraesCS6A01G048700.1 Wheat plasma membrane 49.52 49.68
TraesCS6A01G049900.1 Wheat plasma membrane 49.3 49.62
TraesCS6A01G048800.1 Wheat plasma membrane 49.41 49.57
TraesCS6A01G049000.1 Wheat plasma membrane 49.19 49.09
CDY66698 Canola plasma membrane 45.75 47.81
CDX84735 Canola plasma membrane 45.43 47.52
CDY48271 Canola plastid 37.57 47.23
CDY12211 Canola plasma membrane 42.2 44.09
TraesCS5A01G218900.1 Wheat plasma membrane 27.23 32.6
TraesCS7A01G341200.1 Wheat plasma membrane 30.79 31.96
TraesCS5A01G219800.1 Wheat plasma membrane 31.54 31.68
TraesCS5A01G218300.1 Wheat plasma membrane 32.4 31.55
TraesCS6A01G347900.1 Wheat plasma membrane 33.91 31.25
TraesCS3A01G023600.2 Wheat plasma membrane 30.14 31.04
TraesCS6A01G347400.1 Wheat plastid 34.23 30.58
TraesCS5A01G218400.1 Wheat plasma membrane 30.36 30.45
TraesCS5A01G042800.1 Wheat plasma membrane 29.06 30.07
TraesCS5A01G218600.1 Wheat plasma membrane 29.49 30.01
TraesCS5A01G218700.1 Wheat plasma membrane 29.28 29.66
TraesCS5A01G218000.1 Wheat plasma membrane 30.57 28.98
TraesCS7A01G154100.1 Wheat plasma membrane 29.06 28.85
TraesCS5A01G218200.1 Wheat plasma membrane 29.49 28.28
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 21.1 26.89
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF7InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS2A01G257200EnsemblPlants:TraesCS2A01G257200.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr2A:+:394380187..394383720
Molecular Weight (calculated)
100848.0 Da
IEP (calculated)
6.893
GRAVY (calculated)
0.079
Length
929 amino acids
Sequence
(BLAST)
001: MGWALPLLRV VCLCSLLAVA RPARPANVSI GALFTFDSVI GRSARAAIDL AVADVNRDAR VLRGTHLSLV AQDTKCSGFV GTIQALQLME KKVVAVVGPQ
101: SSGIAHVVSH VVNELHVPLL SFAATDPALA SAQYPYFVRA ARGDDSSQMA AVADIVTYYG WREVTVIYVD NDYGRGGVDA LGDALEAQRA KVSFKAPFPP
201: DADQAAIADL LVRVTMMESR VCVVHVNPDS GLAVFAAARS LGMMASGYVW IATDWLAAAL DSTRPPNPRA MSLVQGVVTL RQHTPDSGAK TSLTSRFAAA
301: QLNRTATLNA FGLAAYDAVW MAARAIDEFL EDGGNVTFSV DPRLQQEVNG SSTLRLDTLR VFDQGEQLLQ KVMLANFTGV TGGVRFSADG RSLADPAYEV
401: LNVGGTGVRR VGYWSNHSHL SVAAPTPLRI KTNSSQQQQE QRLYSVIWPG ETTSPPRGWV FPNNGRPLRI GVPYRTTQKQ FVSKDSGPDG ASGYCIDVFK
501: AAVALLPYPV PVSFILFGDG VKNPSYSDLV NKVANNVFDA AVGDVSIVTN RTRVVDFTQP YVESGLVIVS PVKEKSSNAW AFLKPFTLGM WAVTGAFFLF
601: VGAVVWILEH RFNPEFRGSP REQLVTIFWF SFSTMFFAHR ENTVSSLGRF VLIIWLFVVL IINSSYTASL TSILTVQQLS TGIQGLDGLL ASADPIGYQV
701: GSFAKSYMMQ ELNVPESRLK ELAIDDYAAS LQLGPRNGGV AAIVDELPYV DLFLSTNCQF KTVGQEFTKS GWGFAFQRDS PLAVDLSTAI LTLSENGDLQ
801: RIHDKWLNPG QCDSSQGGDV AADRLNLSSF WGLFLISGVA CFIALVIFFT RILCQYGKYN QGDDEGGTPP EDCPVRRPER LRSIRDLITF VDMKEEEAKR
901: AIKRKSSDDR RDRSIASSAG ASSFSASTV
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.