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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G246200.1 Wheat plasma membrane 91.92 95.2
TraesCS2D01G226400.1 Wheat plasma membrane 94.83 95.03
HORVU2Hr1G045730.6 Barley plasma membrane 94.5 94.71
EER97313 Sorghum plasma membrane 79.96 80.3
Zm00001d006508_P003 Maize plasma membrane 79.42 79.85
GSMUA_Achr9P11690_001 Banana plasma membrane 63.36 65.85
GSMUA_Achr9P02750_001 Banana plasma membrane 63.47 64.23
GSMUA_Achr6P00460_001 Banana plasma membrane 61.85 62.05
TraesCS2A01G257200.1 Wheat plasma membrane 58.19 58.13
Solyc05g045650.2.1 Tomato plasma membrane 54.31 57.47
VIT_12s0059g02270.t01 Wine grape plasma membrane 57.0 57.25
TraesCS7A01G455200.1 Wheat plasma membrane 57.33 56.96
TraesCS1A01G390300.2 Wheat plasma membrane 57.0 56.4
KRH26793 Soybean plasma membrane 56.68 55.54
Solyc07g052400.2.1 Tomato cytosol 48.49 55.49
KRH22559 Soybean plasma membrane 56.36 55.23
KRH25388 Soybean plasma membrane 54.96 55.19
CDY06165 Canola plasma membrane 51.62 54.99
PGSC0003DMT400065539 Potato plasma membrane 55.71 54.94
PGSC0003DMT400013497 Potato plasma membrane 56.03 54.79
KRH56121 Soybean plasma membrane 54.74 54.68
CDY10044 Canola plasma membrane 54.09 53.46
CDY49512 Canola plasma membrane 53.88 52.47
Bra015398.1-P Field mustard plasma membrane 53.66 52.37
CDY46839 Canola plasma membrane 53.34 52.05
Bra032480.1-P Field mustard plasma membrane 53.66 51.82
AT1G05200.1 Thale cress plasma membrane 53.34 51.62
AT2G32390.5 Thale cress plasma membrane 52.91 51.52
TraesCS2A01G455200.2 Wheat plasma membrane 50.86 51.36
TraesCS6A01G048800.1 Wheat plasma membrane 50.11 50.22
TraesCS6A01G049900.1 Wheat plasma membrane 49.89 50.16
Bra005589.1-P Field mustard plasma membrane 50.65 49.74
TraesCS6A01G048700.1 Wheat plasma membrane 49.46 49.57
TraesCS6A01G049000.1 Wheat plasma membrane 49.68 49.52
CDY48271 Canola plastid 36.64 46.01
CDY66698 Canola plasma membrane 44.07 46.01
CDX84735 Canola plasma membrane 43.43 45.38
CDY12211 Canola plasma membrane 40.3 42.07
TraesCS5A01G218900.1 Wheat plasma membrane 28.45 34.02
TraesCS7A01G341200.1 Wheat plasma membrane 31.68 32.85
TraesCS5A01G219800.1 Wheat plasma membrane 32.44 32.54
TraesCS5A01G218600.1 Wheat plasma membrane 31.03 31.54
TraesCS5A01G218400.1 Wheat plasma membrane 31.47 31.53
TraesCS5A01G218700.1 Wheat plasma membrane 30.5 30.86
TraesCS5A01G042800.1 Wheat plasma membrane 29.74 30.73
TraesCS5A01G218300.1 Wheat plasma membrane 31.25 30.4
TraesCS5A01G218200.1 Wheat plasma membrane 31.57 30.24
TraesCS5A01G218000.1 Wheat plasma membrane 31.79 30.1
TraesCS3A01G023600.2 Wheat plasma membrane 28.99 29.82
TraesCS6A01G347900.1 Wheat plasma membrane 31.57 29.07
TraesCS7A01G154100.1 Wheat plasma membrane 28.45 28.21
TraesCS6A01G347400.1 Wheat plastid 31.57 28.17
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 22.09 28.12
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF12InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS2A01G220700EnsemblPlants:TraesCS2A01G220700.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr2A:-:209257940..209261916
Molecular Weight (calculated)
100930.0 Da
IEP (calculated)
6.049
GRAVY (calculated)
0.132
Length
928 amino acids
Sequence
(BLAST)
001: MGCTAAHLAA LLLCVSIIAG GAIAGRQNGT NGVSRPAEVR IGALFTFDSV IGRAVKPAIE LAVADVNADP TLLPGTKLSL LMQDTNCSCF VGTIEALQLL
101: AKDVIAVLGP QSSAIAHIIS HAANKLQVPL ISFAASDPTL SSLEYPYFVR ATQSDYYQMS AVASIISQYQ WREVIAIYVD DDYGRGGITA LGDALAKNMA
201: KIAYKAKLPP HAGRTAIQDV LMQVNEMESR VYVVHVNPDS GMTVFSAAKS LGMMNSGYVW IATDWLSAVI DSPAHVDSDA TEHTQGVITL RQHVADSGIQ
301: QSLLPKLNNL TRKGTRSSFS SYTAHAYDSV WLVAHAVEQF LSAGNAVSFS ANQNLQAIKG SSLQLDSLRI LNNGDKLLEK VLQANFTGVS GQVQFTLDGN
401: LIHPAYDILN IGGTGFRTIG HWSNFSGLSV AAPEDLHSVS LDSTTNDMQL HDVIWPGQTA EKPRGWVFPY HGKLLRIGVP LRTSYNEFVM QDDGPDGVKG
501: FSVDVFKSAI SLLPYPVGCS FVLFGDGLKN PSYSDLVQKV SENYFDAAIG DISIVTNRTR LVDFTQPYTE SGLIIVAPAR EIGSNAWAFL KPFTFQMWCV
601: LGLLFLFVGT VVWILEHRTN TEFRGTPRQQ IMTVCWFSFS TMFFAHRENT SSALGRFVLL VWLFVVLIIN SSYTASLTSL LTVQELTSGI KGLDSLISSS
701: SAIGYQVGSF ARNYLVEELN IADSRLVPLN SPSDYARALE LGSGNGGVAA IIDELPYVEI FLSKYCKFKT VGQVFTKGGW GFAFPRDSPL AEDLSTAILT
801: LSENGDLQRI HDEWLSGKKG CESDDSELGS NSLNLSSFWG LFVVCGLACA IALLIFFWRI LFQYSKYNNQ VEVEAAIVNR PARLTSIKSL ISFVDKREEE
901: VKNALKKKPN GSQQARIGTT EEASTLPL
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.