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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G390300.2 Wheat plasma membrane 96.05 95.95
TraesCS1D01G398500.1 Wheat plasma membrane 95.84 95.94
HORVU1Hr1G086120.3 Barley plasma membrane 92.64 93.03
Zm00001d014451_P001 Maize plasma membrane 85.17 84.27
KXG20638 Sorghum plasma membrane 85.38 83.33
TraesCS7B01G355500.1 Wheat plasma membrane 77.16 77.33
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 61.05 63.63
Solyc05g045650.2.1 Tomato plasma membrane 56.46 60.32
VIT_12s0059g02270.t01 Wine grape plasma membrane 57.74 58.55
Solyc07g052400.2.1 Tomato cytosol 50.48 58.32
TraesCS2B01G285400.1 Wheat plasma membrane 57.74 58.3
TraesCS2B01G246200.1 Wheat plasma membrane 54.86 57.37
PGSC0003DMT400065539 Potato plasma membrane 57.2 56.96
PGSC0003DMT400013497 Potato plasma membrane 57.63 56.9
KRH56121 Soybean plasma membrane 56.35 56.84
KRH25388 Soybean plasma membrane 55.92 56.71
KRH26793 Soybean plasma membrane 56.46 55.86
KRH22559 Soybean plasma membrane 56.14 55.54
CDY06165 Canola plasma membrane 51.33 55.22
CDY49512 Canola plasma membrane 55.28 54.35
CDY46839 Canola plasma membrane 55.07 54.26
Bra015398.1-P Field mustard plasma membrane 55.07 54.26
CDY10044 Canola plasma membrane 53.68 53.57
AT2G32390.5 Thale cress plasma membrane 54.43 53.52
AT1G05200.1 Thale cress plasma membrane 54.43 53.18
Bra005589.1-P Field mustard plasma membrane 53.04 52.59
Bra032480.1-P Field mustard plasma membrane 53.47 52.13
TraesCS2B01G477300.4 Wheat plasma membrane 48.99 49.95
TraesCS6B01G065700.1 Wheat plasma membrane 48.56 49.3
TraesCS6B01G066200.1 Wheat plasma membrane 48.45 49.29
TraesCS6B01G065500.1 Wheat plasma membrane 48.67 49.24
TraesCS6B01G065400.1 Wheat plasma membrane 48.03 48.6
CDY48271 Canola plastid 37.35 47.36
CDY66698 Canola plasma membrane 44.5 46.91
CDX84735 Canola plasma membrane 43.86 46.28
CDY12211 Canola plasma membrane 42.26 44.54
TraesCS7B01G242400.1 Wheat plasma membrane 32.44 33.59
GSMUA_Achr5P00750_001 Banana mitochondrion 62.33 31.2
TraesCS5B01G218700.1 Wheat plasma membrane 30.52 30.65
TraesCS5B01G218900.1 Wheat plasma membrane 30.74 30.44
TraesCS5B01G217000.1 Wheat mitochondrion, plasma membrane 28.92 30.31
TraesCS5B01G046400.1 Wheat plasma membrane 29.03 30.29
TraesCS5B01G217800.1 Wheat plasma membrane 27.32 30.05
TraesCS6B01G438400.1 Wheat plasma membrane 28.82 29.97
TraesCS5B01G217700.1 Wheat plasma membrane 28.82 29.57
TraesCS5B01G257800.1 Wheat plasma membrane 28.5 29.57
TraesCS6B01G380800.1 Wheat plasma membrane 32.23 29.55
TraesCS7B01G057800.1 Wheat plasma membrane 27.75 29.55
TraesCS6B01G381400.1 Wheat plasma membrane 31.8 29.39
TraesCS5B01G217500.1 Wheat plasma membrane 29.24 28.78
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 29.99 28.73
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 29.88 28.25
TraesCS5B01G217100.1 Wheat plasma membrane 27.53 27.56
TraesCS6B01G380900.1 Wheat plasma membrane 27.85 27.1
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS1B01G418500EnsemblPlants:TraesCS1B01G418500.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr1B:+:642470587..642475548
Molecular Weight (calculated)
102429.0 Da
IEP (calculated)
6.580
GRAVY (calculated)
0.044
Length
937 amino acids
Sequence
(BLAST)
001: MGALRLTPLL LLLLAAAGRA RAATAAGARP SEVAVGALFT YDSVIGRAAR LAIELAVDDV NADRTVLAAT RLSLIAQDTN CSGFLGTIEA LELMEKNVVA
101: VIGPQSSGIG HVISHVVNEL HVPLLSFAAT DPTLSASEYP YFIRTTMSDY FQMNAVASIV DYYQWKEVTA IFVDDDYGRG GVSALGDALA AKRAKISHKA
201: AIPPNSNTEV INDVLFRANM MESRVMVVHA NPDTGMRIFS IANKLQMMAS GYVWIVTDWL AAVLDSSASG DLKGMSHIQG LIVLRQHTPE SDAKDKFTTK
301: WNNAARSRGI TSGLNSYGFY AYDSVWAVAR GIDKFLDNGQ QVNFSTDPRL HRSNDSTLQL STLKVFDGGE QMLQQLLLTN FTGLTGSVRF GPDRNLVRPA
401: YDILNVGGSG SRLIGYWSNY SGLSVAAPET LYQKPSNNSS VAQRLYNVVW PGDSTTTPKG WVFPNNGKPL RVGVPIKASF KELVAGGRGS DNVTGYCVDI
501: FNEAIRLLPY PVPCQFITIG DGKKNPNYND IIGMIAENSL DAAVGDFAIV RNRTKMAEFT QPYIESGLVI VAPVQRAPSS AWAFMKPFTL EMWCVTCALF
601: IFVGIVVWIL EHRTNEEFRG SPRRQIITII WFSFSTMFFS HRQNTGSALG RFVLIIWLFV VLIINSSYTA SLTSILTVQQ LSTGITGIDN LISSGLPIGY
701: QAGKFTKNYL IEELSIPESR LVALNTIHEY ADALRRGSGD GGVAAIIDEM PYVEIFLSYH CDFRIVGQEF TKEGWGFAFQ RDSPLAADLS TAILQLSESG
801: QLQRIHDEWF TRPSCSTDDT EVGATSLGLR SFWGLFLVCA LICLLALLVF FIRVCWQYSR YSSSEAAGEP GAADAAAPTA AATDTVERPR RPSRFGGFRE
901: LVEFVDKKEA EVKRAMKRRP SEKDNQGAGS SDAQPVS
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.