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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G285400.1 Wheat plasma membrane 98.92 98.71
TraesCS2A01G257200.1 Wheat plasma membrane 98.27 97.95
Zm00001d018614_P003 Maize plastid 75.05 72.47
EER95720 Sorghum plastid 75.7 72.05
Os07t0103100-01 Rice plasma membrane 72.46 70.19
Zm00001d018615_P001 Maize plasma membrane 68.36 65.94
EER95721 Sorghum plastid 64.9 61.26
Solyc05g045650.2.1 Tomato plasma membrane 57.78 61.0
Solyc07g052400.2.1 Tomato cytosol 52.92 60.42
PGSC0003DMT400065539 Potato plasma membrane 59.94 58.98
TraesCS2D01G226400.1 Wheat plasma membrane 58.75 58.75
VIT_12s0059g02270.t01 Wine grape plasma membrane 58.1 58.23
KRH25388 Soybean plasma membrane 58.1 58.23
PGSC0003DMT400013497 Potato plasma membrane 59.29 57.85
TraesCS1D01G398500.1 Wheat plasma membrane 58.42 57.8
KRH56121 Soybean plasma membrane 57.78 57.59
CDY06165 Canola plasma membrane 53.46 56.83
KRH26793 Soybean plasma membrane 57.88 56.6
KRH22559 Soybean plasma membrane 57.34 56.07
TraesCS7D01G444100.2 Wheat plasma membrane 58.42 56.0
Bra015398.1-P Field mustard plasma membrane 56.8 55.31
CDY49512 Canola plasma membrane 56.91 55.3
CDY46839 Canola plasma membrane 56.48 54.99
CDY10044 Canola plasma membrane 55.72 54.95
AT1G05200.1 Thale cress plasma membrane 55.72 53.81
Bra032480.1-P Field mustard plasma membrane 55.29 53.28
TraesCS2D01G455600.2 Wheat plasma membrane 52.59 52.99
Bra005589.1-P Field mustard plasma membrane 54.0 52.91
AT2G32390.5 Thale cress plasma membrane 54.32 52.78
CDY66698 Canola plasma membrane 45.9 47.81
CDX84735 Canola plasma membrane 45.68 47.64
CDY48271 Canola plastid 37.69 47.23
CDY12211 Canola plasma membrane 42.44 44.21
TraesCS2D01G025600.1 Wheat plasma membrane 24.51 34.82
TraesCS5D01G228000.1 Wheat plasma membrane 28.29 33.08
TraesCS5D01G226400.1 Wheat plasma membrane 32.72 31.93
TraesCS5D01G227800.1 Wheat plasma membrane 31.64 31.71
TraesCS5D01G226500.2 Wheat cytosol 29.81 31.51
TraesCS6D01G330900.1 Wheat plasma membrane 34.02 31.25
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 21.17 30.87
TraesCS5D01G225900.1 Wheat golgi 28.83 30.83
TraesCS6D01G330500.1 Wheat plasma membrane 33.8 30.78
TraesCS5D01G226000.1 Wheat plasma membrane 30.67 30.44
TraesCS5D01G266800.1 Wheat plasma membrane 29.37 30.43
TraesCS2D01G462300.1 Wheat plasma membrane 31.75 30.18
TraesCS5D01G226700.3 Wheat plasma membrane 29.16 29.44
TraesCS5D01G051300.1 Wheat golgi 28.29 29.14
TraesCS5D01G226600.1 Wheat plasma membrane 29.16 29.06
TraesCS5D01G226300.1 Wheat plasma membrane 30.13 29.03
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 30.35 28.62
TraesCS5D01G226800.1 Wheat plasma membrane 29.16 28.36
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF7InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS2D01G265700EnsemblPlants:TraesCS2D01G265700.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr2D:-:324345303..324348818
Molecular Weight (calculated)
100589.0 Da
IEP (calculated)
7.282
GRAVY (calculated)
0.071
Length
926 amino acids
Sequence
(BLAST)
001: MGSALLRVLC LCSLVALARP ARPANVSIGA LFTFDSVIGR SARAAIDLAV ADVNRDARVL RGTHLSLVAQ DTKCSGFVGT IQALQLMEKK VVAVVGPQSS
101: GIAHVVSHVV NELHVPLLSF AATDPALASA QYPYFVRAAR GDDSSQMAAV ADIVTYYGWR EVTVIYVDND YGRGGVDALG DALEAKRAKV SFKAPFPPDA
201: DQAAIADLLV RVTMMESRVC VVHVNPDSGL AVFAAARSLG MMASGYVWIA TDWLAAALDS TRPPNPRAMS LVQGVVTLRQ YTPDSGAKRS LTSRFATAQL
301: NRTATLNAFG LAAYDAVWMA ARAIDEFLED GGNVTFSADP RLQQEVNGTS TLRLDTLRVF DQGEQLLHKV MLANFTGVTG GVRFSADGRS LADPAYEVLN
401: VGGTGVRRVG YWSNHSHLSV AAPTPLRIKT NSSQQQEQRL YSVIWPGETT SPPRGWVFPN NGRPLRIGVP YRTTQKQFVS KDSGPDGASG YCIDVFKAAV
501: ALLPYPVPVS FILFGDGVKN PDYSDLVNKV ANNVFDAAVG DVSIVTNRTR VVDFTQPYVE SGLVIVSPVK EKSSNAWAFL KPFTLGMWAV TGAFFLFVGA
601: VVWILEHRFN PEFRGSPREQ LVTIFWFSFS TMFFAHRENT VSSLGRFVLI IWLFVVLIIN SSYTASLTSI LTVQQLSTGI QGLDGLLASA DPIGYQVGSF
701: AKSYMMQELN VPESRLKELA IDDYATSLQL GPRNGGVAAI VDELPYVDLF LSTNCQFKTV GQEFTKSGWG FAFQRDSPLA VDLSTAILTL SENGDLQRIH
801: DKWLNPGQCD SSQGGDVAAD RLNLSSFWGL FLISGVACFI ALVIFFTRIL CQYGKYNQGD GEGGTPPEEF PVRRPERLRS IRDLITFVDM KEEEAKRAIK
901: RKSSDDRRDR SIASSAGASS FSASTV
Best Arabidopsis Sequence Match ( AT2G32390.5 )
(BLAST)
001: MGFFVMIRDV SMGFMLLCIS ALWVLPIQGA GRESFSRNSS SSSLPSSVNV GALFTYDSFI GRAAKLAFVA AIEDINADQS ILRGTKLNIV FQDTNCSGFV
101: GTMGALQLME NKVVAAIGPQ SSGIGHIISH VANELHVPFL SFAATDPTLS SLQYPYFLRT TQNDYFQMNA ITDFVSYFRW REVVAIFVDD EYGRNGISVL
201: GDALAKKRAK ISYKAAFPPG ADNSSISDLL ASVNLMESRI FVVHVNPDSG LNIFSVAKSL GMMGSGYVWI TTDWLLTALD SMEPLDPRAL DLLQGVVAFR
301: HYTPESDNKR QFKGRWKNLR FKESLKSDDG FNSYALYAYD SVWLVARALD VFFSQGNTVT FSNDPSLRNT NDSGIKLSKL HIFNEGERFL QVILEMNYTG
401: LTGQIEFNSE KNRINPAYDI LNIKSTGPLR VGYWSNHTGF SVAPPETLYS KPSNTSAKDQ RLNEIIWPGE VIKPPRGWVF PENGKPLKIG VPNRVSYKNY
501: ASKDKNPLGV KGFCIDIFEA AIQLLPYPVP RTYILYGDGK KNPSYDNLIS EVAANIFDVA VGDVTIITNR TKFVDFTQPF IESGLVVVAP VKGAKSSPWS
601: FLKPFTIEMW AVTGALFLFV GAVIWILEHR FNEEFRGPPR RQIITVFWFS FSTMFFSHRE NTVSTLGRFV LLVWLFVVLI INSSYTASLT SILTVQQLTS
701: RIEGMDTLIA SNEPIGVQDG TFAWKFLVNE LNIAPSRIIP LKDEEEYLSA LQRGPRGGGV AAIVDELPYI KALLSNSNCK FRTVGQEFTR TGWGFAFQRD
801: SPLAVDMSTA ILQLAEEGKL EKIRKKWLTY DHECTMQISD TENYQISVQS FWGLFLICGV VWFIALTLFC WKVFWQYQRL RPEESDEVQA RSEEAGSSRG
901: KSLRAVSFKD LIKVVDKREA EIKEMLKEKS SKKLKDGQSS AENSQSKDHE TPQ
Arabidopsis Description
GLR3.5Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.