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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G398500.1 Wheat plasma membrane 96.38 96.58
TraesCS1B01G418500.1 Wheat plasma membrane 95.95 96.05
HORVU1Hr1G086120.3 Barley plasma membrane 93.28 93.78
Zm00001d014451_P001 Maize plasma membrane 85.71 84.9
KXG20638 Sorghum plasma membrane 85.71 83.75
TraesCS7A01G455200.1 Wheat plasma membrane 77.83 78.16
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 61.19 63.85
Solyc05g045650.2.1 Tomato plasma membrane 56.5 60.43
Solyc07g052400.2.1 Tomato cytosol 50.75 58.69
VIT_12s0059g02270.t01 Wine grape plasma membrane 57.78 58.66
TraesCS2A01G257200.1 Wheat plasma membrane 57.78 58.34
PGSC0003DMT400065539 Potato plasma membrane 57.36 57.17
TraesCS2A01G220700.1 Wheat plasma membrane 56.4 57.0
PGSC0003DMT400013497 Potato plasma membrane 57.57 56.9
KRH25388 Soybean plasma membrane 55.76 56.6
KRH56121 Soybean plasma membrane 55.97 56.51
KRH26793 Soybean plasma membrane 56.72 56.18
KRH22559 Soybean plasma membrane 56.4 55.86
CDY06165 Canola plasma membrane 51.71 55.68
CDY49512 Canola plasma membrane 55.44 54.56
CDY46839 Canola plasma membrane 55.22 54.47
Bra015398.1-P Field mustard plasma membrane 55.22 54.47
AT2G32390.5 Thale cress plasma membrane 55.01 54.14
AT1G05200.1 Thale cress plasma membrane 55.12 53.91
CDY10044 Canola plasma membrane 53.84 53.78
Bra005589.1-P Field mustard plasma membrane 53.84 53.44
Bra032480.1-P Field mustard plasma membrane 53.73 52.45
TraesCS2A01G455200.2 Wheat plasma membrane 49.25 50.27
TraesCS6A01G049900.1 Wheat plasma membrane 48.51 49.3
TraesCS6A01G048700.1 Wheat plasma membrane 48.61 49.24
TraesCS6A01G048800.1 Wheat plasma membrane 48.4 49.03
TraesCS6A01G049000.1 Wheat plasma membrane 48.4 48.76
CDY48271 Canola plastid 37.85 48.04
CDY66698 Canola plasma membrane 45.31 47.81
CDX84735 Canola plasma membrane 44.56 47.07
CDY12211 Canola plasma membrane 42.86 45.22
TraesCS5A01G218900.1 Wheat plasma membrane 26.97 32.6
TraesCS7A01G341200.1 Wheat plasma membrane 31.02 32.51
GSMUA_Achr5P00750_001 Banana mitochondrion 62.26 31.2
TraesCS5A01G219800.1 Wheat plasma membrane 30.7 31.14
TraesCS3A01G023600.2 Wheat plasma membrane 29.53 30.71
TraesCS5A01G218400.1 Wheat plasma membrane 30.17 30.56
TraesCS5A01G042800.1 Wheat plasma membrane 29.0 30.29
TraesCS5A01G218600.1 Wheat plasma membrane 29.0 29.79
TraesCS5A01G218700.1 Wheat plasma membrane 29.1 29.77
TraesCS6A01G347900.1 Wheat plasma membrane 31.88 29.66
TraesCS5A01G218000.1 Wheat plasma membrane 30.81 29.49
TraesCS5A01G218300.1 Wheat plasma membrane 29.64 29.14
TraesCS6A01G347400.1 Wheat plastid 31.88 28.75
TraesCS5A01G218200.1 Wheat plasma membrane 29.64 28.69
TraesCS7A01G154100.1 Wheat plasma membrane 28.04 28.1
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 20.36 26.2
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptncoils:Coil
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176
PANTHER:PTHR43891PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS1A01G390300EnsemblPlants:TraesCS1A01G390300.2TIGR:cd06366
TIGR:cd13686SEG:seg::::
Description
No Description!
Coordinates
chr1A:+:557948010..557952416
Molecular Weight (calculated)
102426.0 Da
IEP (calculated)
6.460
GRAVY (calculated)
0.074
Length
938 amino acids
Sequence
(BLAST)
001: MGAPRLTPLL LLVLLAAAGR AATVAGAGAR PSEVAVGALF TYDSVIGRAA RLAIDLAVDD VNADRTVLAA TRLSLVAQDT NCSGFLGTIE ALELMEKNVV
101: AVIGPQSSGI GHVISHVVNE LHVPLLSFAA TDPTLSASEY PYFIRTTMSD YFQMNAIASI VDYYQWKEVT AIFVDDDYGR GGVSALGDAL AAKRAKISHK
201: AAIPPNSNTQ VINDVLFRAN MMESRVMVVH ANPDTGMKIF SVANKLQMMA SGYVWIVTDW LAAVLDSSAS GDLKGMSHIQ GLIVLRQHTS ESDAKDKFIT
301: KWNNAARSRG ITSGLNSYGF YAYDSVWAVA RGIDKFLDNG QQVNFSTDPR LHRSNDSTLQ LSTLKVFDGG EQMLQQLLLT NFTGLTGLVQ FGPDRNLVRP
401: AYDILNVGGS GSRLIGYWSN YSGLSVAAPE TLYQKPPNAS SVAQRLYNVV WPGDSTTTPK GWVFPNNGQP LRVGVPIKAS FKELVAGGRG SDNVTGYCVD
501: IFNAAIRLLP YPVPCQFITI GDGKKNPNYD DIISMIADNS LDAAVGDFAI VRNRTKMAEF TQPYIESGLV IVAPVQRAPS SAWAFMKPFT LEMWCVTCAL
601: FIFVGIVVWI LEHRTNEEFR GSPRRQIITI IWFSFSTMFF SHRQNTGSAL GRFVLIIWLF VVLIINSSYT ASLTSILTVQ QLSTGITGID NLISSGLPIG
701: YQAGKFTKNY LIEELSIPES RLVALNTIHE YADALRRGSG DGGVAAIVDE MPYVEIFLSY HCDFRIVGQE FTKEGWGFAF QRDSPLAADL STAILQLSES
801: GQLQRIHDEW FTRPSCSTDD TEVGATSLGL RSFWGLFLVC ALICLLALLV FFIRVCWQYS RYSSSEAAGE PSAADAVGPT AAATNTVERA RRPSRLGSFR
901: ELIEFVDKKE AEVRRTMKRR QSEKDNQAAG SSDAQPVS
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.