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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d006508_P003
Zm00001d014451_P001
Zm00001d014456_P001
Zm00001d014458_P001
Zm00001d018614_P003
Zm00001d018615_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 Zm00001d006508_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014451_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014456_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014458_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018614_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018615_P001 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG20638 Sorghum plasma membrane 92.82 91.56
HORVU1Hr1G086120.3 Barley plasma membrane 85.32 86.6
TraesCS1A01G390300.2 Wheat plasma membrane 84.9 85.71
TraesCS1D01G398500.1 Wheat plasma membrane 84.58 85.58
TraesCS1B01G418500.1 Wheat plasma membrane 84.27 85.17
Zm00001d014458_P001 Maize plasma membrane 82.15 84.57
Zm00001d014456_P001 Maize plasma membrane 75.5 77.3
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 62.72 66.07
VIT_12s0059g02270.t01 Wine grape plasma membrane 59.87 61.36
Solyc05g045650.2.1 Tomato plasma membrane 56.39 60.89
Solyc07g052400.2.1 Tomato cytosol 51.32 59.93
KRH25388 Soybean plasma membrane 57.02 58.44
PGSC0003DMT400065539 Potato plasma membrane 57.97 58.34
KRH26793 Soybean plasma membrane 58.29 58.29
KRH56121 Soybean plasma membrane 57.02 58.13
KRH22559 Soybean plasma membrane 57.87 57.87
PGSC0003DMT400013497 Potato plasma membrane 57.55 57.43
Zm00001d006508_P003 Maize plasma membrane 55.76 57.2
CDY06165 Canola plasma membrane 52.59 57.18
CDY46839 Canola plasma membrane 56.71 56.47
Bra015398.1-P Field mustard plasma membrane 56.6 56.36
CDY49512 Canola plasma membrane 56.49 56.14
CDY10044 Canola plasma membrane 54.91 55.38
AT1G05200.1 Thale cress plasma membrane 56.07 55.37
Zm00001d018614_P003 Maize plastid 55.97 55.27
AT2G32390.5 Thale cress plasma membrane 55.54 55.19
Bra032480.1-P Field mustard plasma membrane 54.7 53.9
Bra005589.1-P Field mustard plasma membrane 53.54 53.65
Zm00001d015007_P003 Maize plasma membrane 49.1 51.61
Zm00001d018615_P001 Maize plasma membrane 52.16 51.46
Zm00001d002532_P003 Maize plasma membrane 50.26 51.13
CDY66698 Canola plasma membrane 45.41 48.37
CDX84735 Canola plasma membrane 44.98 47.97
Zm00001d054016_P004 Maize plasma membrane 48.15 47.95
CDY48271 Canola plastid 37.38 47.9
Zm00001d033769_P001 Maize golgi, plasma membrane 31.57 47.39
CDY12211 Canola plasma membrane 42.56 45.33
GSMUA_Achr5P00750_001 Banana mitochondrion 63.67 32.21
Zm00001d018332_P001 Maize plastid 31.89 30.32
Zm00001d005782_P001 Maize plasma membrane 31.15 30.1
Zm00001d005783_P002 Maize plasma membrane 30.94 30.05
Zm00001d020568_P001 Maize golgi 29.99 29.55
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 31.26 29.11
Zm00001d018329_P001 Maize plasma membrane 30.41 28.8
Zm00001d020563_P001 Maize plasma membrane 28.51 28.36
Protein Annotations
Gene3D:1.10.287.70EntrezGene:103626309MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1D6GTI6
InterPro:ANF_lig-bd_rcptProteinID:AQK66311.1ncoils:CoilGO:GO:0003674GO:GO:0004871GO:GO:0004970
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023
InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PRINTS:PR01176PANTHER:PTHR43891PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004DE8F61EnsemblPlantsGene:Zm00001d014451
EnsemblPlants:Zm00001d014451_P001EnsemblPlants:Zm00001d014451_T001SEG:seg:::
Description
Glutamate receptor 3.4
Coordinates
chr5:+:47928633..47933913
Molecular Weight (calculated)
103594.0 Da
IEP (calculated)
6.679
GRAVY (calculated)
0.099
Length
947 amino acids
Sequence
(BLAST)
001: MPMGALQVML LRLVLLAASA ATTAVTVTAA PPPSEVAVGA LFTYDSTIGR AARLAIELAV DDVNADRTVL AGTRLNLLAQ DTNCSGFLGA VEALQLMERN
101: VVAVIGPQSS GIGHVISHVV NELHVPLLSF AATDPTLSAS EYPYFIRTTI SDYFQMNAVA SIVDYYQWKE VTAIFVDDDY GRGGVSALGD ALAAKRARIS
201: YKAAIPPNSN TDVINDVLFK ANMMESRVMV VHVNPDTGTR IFSVANKLQM MATGYVWIVT DWLAAVLDSS TSRDRKEMSH IQGLIVLRQH TPESVAKNKF
301: ISKWNNAARN RSITSGLNSY GFYAYDSVWA IARGVDQFLN NGQQINFSTD PVLHDTNGSS LHLSTLKIFD GGEQMLQQLL LTNFTGLTGR VQFNSDRNLV
401: HPAYDILNIG GSGSRLIGYW SNYSGLSVAA PEILYQKPPD TSSIAQRLHN VVWPGDSTTT PKGWVFPNNG QPLRVGVPIK PSFKELVAAG KGPDNVTGYC
501: IDIFNAAIRL LPYPVPCQFI AIGDGRKNPN YDDIISMVAA NSLDAAVGDF AIVRNRTKIA EFTQPYIESG LVIVAPVKQA TSSAWAFLKP FTLEMWCVTG
601: ALFIFVGIVV WILEHRSNEE FRGSPRRQLI TIFWFSFSTM FFSHRQNTVS ALGRFVLIIW LFVVLIINSS YTASLTSILT VQQLATGITG IDSLISSGLP
701: IGYQAGKFTR NYLIEELNIP ESRLVPLNTI QEYADALKRG PKDGGVVAIV DEMPYVEIFL SYHCNFRIVG QEFTKEGWGF AFKRDFPLAA DLSTAILQLS
801: ESGQLQRIHD EWFTRPSCSS DDSEVGATRL GLGSFWGLFL VCALICLLAL LVFFIRICWQ YNKYSNSEAA GEPSAAAAAA AAVDAAAAAA DAVERQRRPS
901: RLGSFKDIIQ FVDKKEEEIK KTMKRRVSEK DNNQAAGSSE AHSVASA
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.