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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48271 Canola plastid 69.4 83.49
Bra005589.1-P Field mustard plasma membrane 82.11 77.25
CDY66698 Canola plasma membrane 76.72 76.72
CDX84735 Canola plasma membrane 76.6 76.69
AT2G32390.5 Thale cress plasma membrane 74.13 69.15
CDY06165 Canola plasma membrane 61.3 62.57
CDY46839 Canola plasma membrane 63.89 59.73
CDY49512 Canola plasma membrane 63.89 59.6
CDY10044 Canola plasma membrane 62.09 58.79
Solyc07g052400.2.1 Tomato cytosol 49.49 54.25
Solyc05g045650.2.1 Tomato plasma membrane 51.86 52.57
VIT_12s0059g02270.t01 Wine grape plasma membrane 53.88 51.84
PGSC0003DMT400065539 Potato plasma membrane 52.98 50.05
KRH26793 Soybean plasma membrane 53.32 50.05
KRH22559 Soybean plasma membrane 52.76 49.52
PGSC0003DMT400013497 Potato plasma membrane 52.64 49.32
KRH25388 Soybean plasma membrane 51.18 49.24
KRH56121 Soybean plasma membrane 50.96 48.76
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 46.12 45.61
GSMUA_Achr9P11690_001 Banana plasma membrane 45.78 45.58
CDX75491 Canola cytosol, plasma membrane, plastid 10.24 44.61
GSMUA_Achr6P00460_001 Banana plasma membrane 46.34 44.54
Os06t0680500-01 Rice cytosol, plasma membrane 44.43 44.38
GSMUA_Achr9P02750_001 Banana plasma membrane 45.67 44.27
HORVU1Hr1G086120.3 Barley plasma membrane 45.67 43.52
Zm00001d014458_P001 Maize plasma membrane 44.66 43.15
EER90229 Sorghum plasma membrane 44.66 42.87
TraesCS1A01G390300.2 Wheat plasma membrane 45.22 42.86
TraesCS1D01G398500.1 Wheat plasma membrane 45.11 42.84
Zm00001d014451_P001 Maize plasma membrane 45.33 42.56
TraesCS2B01G285400.1 Wheat plasma membrane 44.32 42.46
TraesCS2D01G265700.1 Wheat plasma membrane 44.21 42.44
TraesCS7A01G455200.1 Wheat plasma membrane 44.43 42.29
TraesCS1B01G418500.1 Wheat plasma membrane 44.54 42.26
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 44.43 42.25
TraesCS2A01G257200.1 Wheat plasma membrane 44.09 42.2
TraesCS7B01G355500.1 Wheat plasma membrane 44.32 42.14
KXG20638 Sorghum plasma membrane 45.22 41.88
KXG20640 Sorghum plasma membrane 43.53 41.61
CDY35797 Canola plasma membrane 38.25 41.36
EER97313 Sorghum plasma membrane 42.86 41.23
Zm00001d014456_P001 Maize plasma membrane 42.86 41.19
TraesCS2B01G246200.1 Wheat plasma membrane 41.51 41.18
Zm00001d006508_P003 Maize plasma membrane 42.63 41.06
CDY68928 Canola extracellular, plasma membrane 24.52 40.9
TraesCS7D01G444100.2 Wheat plasma membrane 44.43 40.89
CDY71348 Canola golgi, plasma membrane 12.15 40.75
CDY70557 Canola extracellular, plasma membrane 24.41 40.71
HORVU2Hr1G045730.6 Barley plasma membrane 42.07 40.39
TraesCS2A01G220700.1 Wheat plasma membrane 42.07 40.3
Os07t0103100-01 Rice plasma membrane 43.19 40.17
TraesCS2D01G226400.1 Wheat plasma membrane 41.73 40.06
Zm00001d018614_P003 Maize plastid 42.97 39.83
CDY65624 Canola plasma membrane 38.92 39.77
CDX78008 Canola plasma membrane 39.48 39.39
CDX73718 Canola plasma membrane 39.48 39.39
EER95720 Sorghum plastid 43.08 39.36
Zm00001d018615_P001 Maize plasma membrane 42.41 39.27
CDY24327 Canola plasma membrane 40.27 39.25
CDX80728 Canola cytosol 10.57 38.84
CDY52597 Canola plasma membrane 39.71 38.71
CDX95758 Canola cytosol 17.55 38.33
CDX69127 Canola plasma membrane 39.03 38.05
CDX76331 Canola plasma membrane 38.81 37.91
EER95721 Sorghum plastid 41.17 37.31
CDX75490 Canola extracellular, plasma membrane, vacuole 24.18 36.94
CDY15337 Canola plasma membrane 35.43 35.23
CDY48270 Canola plasma membrane 36.11 34.82
CDY12210 Canola plasma membrane 35.77 34.53
CDX84734 Canola plasma membrane 35.43 34.02
CDY66699 Canola plasma membrane 34.87 33.48
CDY58212 Canola cytosol, plasma membrane 24.3 25.9
CDY70035 Canola cytosol, plasma membrane 23.28 25.59
CDY31755 Canola cytosol 26.1 25.14
CDY31756 Canola cytosol, peroxisome, plastid 24.52 25.12
CDY54213 Canola plasma membrane 24.97 24.97
CDY36173 Canola plasma membrane 22.5 24.81
CDX72325 Canola plasma membrane 18.79 24.78
CDY00544 Canola plasma membrane 21.71 24.78
CDY51113 Canola plasma membrane 23.85 24.68
CDX85724 Canola plasma membrane 23.85 24.68
CDY56837 Canola plasma membrane 25.42 24.62
CDY39533 Canola plasma membrane 26.55 24.3
CDY45595 Canola plasma membrane 23.51 24.3
CDX73196 Canola cytosol, peroxisome, plasma membrane 24.86 24.21
CDY38574 Canola plasma membrane 26.32 24.2
CDY63640 Canola cytosol 14.51 23.76
CDY68132 Canola plasma membrane 25.87 22.79
CDY31759 Canola cytosol, peroxisome, plasma membrane 11.92 22.51
GSMUA_Achr5P00750_001 Banana mitochondrion 47.13 22.38
CDY13449 Canola cytosol 23.4 21.69
CDY50141 Canola plasma membrane 11.92 20.0
CDY72467 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078FG45UniProt:A0A078FG45InterPro:ANF_lig-bd_rcpt
EnsemblPlants:CDY12211ProteinID:CDY12211ProteinID:CDY12211.1GO:GO:0003674GO:GO:0004871GO:GO:0004930
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0007186GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0035235GO:GO:0038023InterPro:GPCR_3EnsemblPlantsGene:GSBRNA2T00061230001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR00248PANTHER:PTHR43891PANTHER:PTHR43891:SF12
InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelix
UniParc:UPI0004EDBE03SEG:seg::::
Description
BnaC04g12410DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078FG45]
Coordinates
chrLK032018:+:456266..459613
Molecular Weight (calculated)
99511.2 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.094
Length
889 amino acids
Sequence
(BLAST)
001: MELLVVIRAG LVEKVFQETL LLLLGHALST SVLSLLMILS LEEQLNRRLW RPLTTLMLIR VFSGEPSSIL SSMTQTAVDL LAPWEVMENK VVAAIGPQYS
101: GIGHIISYVA NELHVPLLSF AATDPTLSSL QFPYFLRTTQ NDYFQMNSIA DFVSYFRWRE VVAIFVDDEY GRNGISVLGD ALAKKRAKIS YKAAFTPGAD
201: NSSITDVLAS VNLMESRIFV VHVNPDSGLN IFSAAKSLGM MGSGYVWIAT DWLLTALDSV ETMDPKTMDL LQGVVAFRHY IPESNNKRRF KGRWKNLRSK
301: ESSGGADGFN SYAMYAYDTV WLVARALEVF FSDGNTVTFS SDPNLRKTND SNIKLSALNV FNEGERFLQV IHEMNYTGLT GQIEFDSEKN RKNPAYDILN
401: INNRGPQRVG YWSNHTGFSV EPPETLYSKP PNTSAEHQRL NGIIWPGEVT KPPRGWAFPD NGEPLKIGVP HRVSYKNYVS KDNNSLGVKG YCIDIFEAAI
501: QLIPYPVPRT YIVYGDGRRN PSYDNLISEV AANNFDVAVG DVTIVTNRTK FVDFTQPFME SGLVVPSFGF LNTALMKSFV DLLGVKSSPF SGLASQRCSS
601: LRVFFSLLNV IYKLSFLIFR GEHGDLTSIL TVQQLTSRIE GMDSLIASNE PIGVQDGAFA YKYLVNELNI PPSRIISLKD EEEYLSALQL GPRAGGVAAI
701: VDKFPYIKAL LSNSNCKFRT VGPEFTRTGW GFAFQRDSPL AVDMSTAILQ LSDEGKLENI RKKWLTYSHE CSMQIADTEN YQITVQSFWG LFLICGIVWF
801: IVLTLFCWKV IWQCQRLRTE EEGDEVRASE EASSSRAGRS LRAASFKDLI RVVDKRETEI KEMLKLKSSK KLKASQSSGE TPLENSLDT
Best Arabidopsis Sequence Match ( AT2G32390.1 )
(BLAST)
001: MILSLEERPN LRLWRPLKTL MLTRVSSGAP SLILSSRTLI AVDLLAPWEL MENKVVAAIG PQSSGIGHII SHVANELHVP FLSFAATDPT LSSLQYPYFL
101: RTTQNDYFQM NAITDFVSYF RWREVVAIFV DDEYGRNGIS VLGDALAKKR AKISYKAAFP PGADNSSISD LLASVNLMES RIFVVHVNPD SGLNIFSVAK
201: SLGMMGSGYV WITTDWLLTA LDSMEPLDPR ALDLLQGVVA FRHYTPESDN KRQFKGRWKN LRFKESLKSD DGFNSYALYA YDSVWLVARA LDVFFSQGNT
301: VTFSNDPSLR NTNDSGIKLS KLHIFNEGER FLQVILEMNY TGLTGQIEFN SEKNRINPAY DILNIKSTGP LRVGYWSNHT GFSVAPPETL YSKPSNTSAK
401: DQRLNEIIWP GEVIKPPRGW VFPENGKPLK IGVPNRVSYK NYASKDKNPL GVKGFCIDIF EAAIQLLPYP VPRTYILYGD GKKNPSYDNL ISEVAANIFD
501: VAVGDVTIIT NRTKFVDFTQ PFIESGLVVV APVKGAKSSP WSFLKPFTIE MWAVTGALFL FVGAVIWILE HRFNEEFRGP PRRQIITVFW FSFSTMFFSH
601: RENTVSTLGR FVLLVWLFVV LIINSSYTAS LTSILTVQQL TSRIEGMDTL IASNEPIGVQ DGTFAWKFLV NELNIAPSRI IPLKDEEEYL SALQRGPRGG
701: GVAAIVDELP YIKALLSNSN CKFRTVGQEF TRTGWGFAFQ RDSPLAVDMS TAILQLAEEG KLEKIRKKWL TYDHECTMQI SDTENYQISV QSFWGLFLIC
801: GVVWFIALTL FCWKVFWQYQ RLRPEESDEV QARSEEAGSS RGKSLRAVSF KDLIKVVDKR EAEIKEMLKE KSSKKLKDGQ SSAENSQSKD HETPQ
Arabidopsis Description
GLR3.5Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.