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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66699 Canola plasma membrane 96.0 96.0
CDY48270 Canola plasma membrane 88.01 88.39
CDY12210 Canola plasma membrane 87.8 88.27
AT2G32400.1 Thale cress plasma membrane 86.39 86.86
CDY15337 Canola plasma membrane 78.83 81.66
KRH26791 Soybean plasma membrane 54.1 55.12
KRH22563 Soybean plasma membrane 53.89 54.9
VIT_12s0059g02260.t01 Wine grape plasma membrane 53.78 54.79
Solyc07g052390.2.1 Tomato nucleus 48.06 51.33
PGSC0003DMT400065543 Potato plasma membrane 50.11 50.99
GSMUA_Achr5P00740_001 Banana plasma membrane 46.54 50.17
Bra022887.1-P Field mustard plasma membrane 95.46 47.6
CDY71348 Canola golgi, plasma membrane 12.63 44.15
CDX75491 Canola cytosol, plasma membrane, plastid 9.61 43.63
CDX73718 Canola plasma membrane 41.68 43.32
CDX78008 Canola plasma membrane 41.68 43.32
CDY06165 Canola plasma membrane 40.5 43.05
CDY10044 Canola plasma membrane 42.87 42.28
CDY46839 Canola plasma membrane 43.41 42.27
CDX69127 Canola plasma membrane 41.58 42.21
CDY49512 Canola plasma membrane 43.3 42.08
CDY35797 Canola plasma membrane 37.15 41.85
CDY24327 Canola plasma membrane 41.04 41.67
CDX76331 Canola plasma membrane 40.93 41.65
CDY52597 Canola plasma membrane 40.93 41.56
CDY65624 Canola plasma membrane 38.77 41.26
CDX95758 Canola cytosol 17.49 39.8
CDX80728 Canola cytosol 10.15 38.84
CDY48271 Canola plastid 30.56 38.3
CDY66698 Canola plasma membrane 36.72 38.25
CDY70557 Canola extracellular, plasma membrane 21.71 37.71
CDY68928 Canola extracellular, plasma membrane 21.71 37.71
CDX84735 Canola plasma membrane 36.07 37.61
CDX75490 Canola extracellular, plasma membrane, vacuole 22.57 35.91
CDY12211 Canola plasma membrane 34.02 35.43
CDY31759 Canola cytosol, peroxisome, plasma membrane 15.87 31.21
CDX72325 Canola plasma membrane 21.81 29.97
CDY70035 Canola cytosol, plasma membrane 25.92 29.67
CDY00544 Canola plasma membrane 24.84 29.52
CDY51113 Canola plasma membrane 27.32 29.45
CDY31756 Canola cytosol, peroxisome, plastid 27.32 29.15
CDY58212 Canola cytosol, plasma membrane 26.13 29.02
CDX85724 Canola plasma membrane 26.89 28.99
CDY54213 Canola plasma membrane 27.65 28.8
CDY36173 Canola plasma membrane 24.95 28.66
CDY45595 Canola plasma membrane 26.24 28.26
CDY31755 Canola cytosol 27.86 27.95
CDX73196 Canola cytosol, peroxisome, plasma membrane 27.21 27.6
CDY56837 Canola plasma membrane 27.32 27.56
CDY39533 Canola plasma membrane 28.4 27.09
CDY38574 Canola plasma membrane 28.08 26.89
CDY50141 Canola plasma membrane 15.33 26.79
CDY68132 Canola plasma membrane 28.19 25.87
CDY13449 Canola cytosol 26.67 25.76
CDY63640 Canola cytosol 12.74 21.73
CDY72467 Canola cytosol 0.11 1.35
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078D8T4InterPro:ANF_lig-bd_rcpt
EnsemblPlants:CDX84734ProteinID:CDX84734ProteinID:CDX84734.1GO:GO:0003674GO:GO:0004871GO:GO:0004970
GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00142019001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891PANTHER:PTHR43891:SF15
InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_N
TMHMM:TMhelixUniParc:UPI0004EE6BB7SEG:seg:::
Description
BnaA03g14960D
Coordinates
chrLK031838:+:990624..994824
Molecular Weight (calculated)
103531.0 Da
IEP (calculated)
8.559
GRAVY (calculated)
0.063
Length
926 amino acids
Sequence
(BLAST)
001: MGFGIDSSVA ITALIVAILV VPMGCQRPQV VNLGAVFTFD SVIGRAAKVA LEAAVSDVNA DTSVLKDTEL RLLMKDSSCN VFHGSFGAFE VLEKEVVAMV
101: GPLSSSVAHT LSDIAKGLQF PLVSFAATDP TLSALQFPFF LRTTPDDAHQ MSALVDFITF HGWKEVISVY SDDELGRNGV SALDDELYKK RSRISHKVPL
201: SVHSDEGSVT DALKKSKSLG PRVYVLHFGP DPLLRIFRIA QKLQMMTREY VWIATDWLSV TLDSSLSDNG TLKRLEGVVG LRQHIPQSVK MHQLTHKLKS
301: NGSMNAYALH AYDTVWMIAY GIEKMLNEGI NITFSYSENL IHAEGTKLHL ERVKIFNSGR VLLEKLLQVN FTGIAGHVRF GSGRNVIGCD YEIINVGKTG
401: VNTVGFWSRN GGFSVVPPDS RHTHKKTGFV SDEKLGNITW PGGGREKPRG WVIADSASPL KIVVPNRVSF VEFVTEENNS SHQIKGLCID IFKEALKFVP
501: YSVPYIFESF GDGHSSPNYK HIIQMVTDGV YDAAVGDFAI VPTRSKLVDF SQPYASTGLV VVIPTNDDNP TWIFLRPFTI RLWCVVLASF LIIAVVIWIL
601: EHRINEDFRG PPRKQLITMI LFSFSTLFKR NQEDTISNQA RLVMIVWLFL LMVLTASYTA NLTSILTVLQ LPSAITGIDS LRASEVPIGY QAGTFTLEYL
701: TYSLGMARSR LVPLDSTEEY ERALKLGPTA FGGVAAIVDE LPYIELFLAE RTGFKIVGDP FMHRGWGFAF KRDSPLAIDM SRAILKLSET RKLQDIRKKW
801: LCKKTCAEKS DGNPEPNQLH LKSFKGLYLV CIAISVSALL VFVFRMVRQF VRYRRMERTS SMPLASWSSS PTMRLKELVF GFVEFVDEKE EAIKRMFRRS
901: NDSDNPSHVV EVQAYPEFRC FFLNHL
Best Arabidopsis Sequence Match ( AT2G32400.1 )
(BLAST)
001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N
Arabidopsis Description
GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.