CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
golgi 4
plasma membrane 7
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48270	Canola	plasma membrane	96.85	96.75
CDX84734	Canola	plasma membrane	88.27	87.8
AT2G32400.1	Thale cress	plasma membrane	86.86	86.86
CDY66699	Canola	plasma membrane	86.86	86.39
CDY15337	Canola	plasma membrane	79.59	81.99
VIT_12s0059g02260.t01	Wine grape	plasma membrane	54.4	55.12
KRH26791	Soybean	plasma membrane	53.64	54.35
KRH22563	Soybean	plasma membrane	53.09	53.8
Solyc07g052390.2.1	Tomato	nucleus	48.97	52.02
PGSC0003DMT400065543	Potato	plasma membrane	50.71	51.32
GSMUA_Achr5P00740_001	Banana	plasma membrane	47.45	50.87
CDY71348	Canola	golgi, plasma membrane	12.49	43.4
CDY06165	Canola	plasma membrane	40.83	43.17
CDY35797	Canola	plasma membrane	37.89	42.46
CDY10044	Canola	plasma membrane	43.21	42.39
CDY46839	Canola	plasma membrane	43.54	42.17
CDX73718	Canola	plasma membrane	40.72	42.09
CDX78008	Canola	plasma membrane	40.61	41.98
CDY49512	Canola	plasma membrane	43.11	41.66
CDY24327	Canola	plasma membrane	40.93	41.34
CDX76331	Canola	plasma membrane	40.83	41.32
CDX69127	Canola	plasma membrane	40.72	41.12
CDY52597	Canola	plasma membrane	40.72	41.12
CDY65624	Canola	plasma membrane	38.55	40.8
CDX75491	Canola	cytosol, plasma membrane, plastid	9.01	40.69
CDX80728	Canola	cytosol	10.31	39.26
CDY66698	Canola	plasma membrane	37.02	38.36
CDY48271	Canola	plastid	30.51	38.02
CDY68928	Canola	extracellular, plasma membrane	21.93	37.9
CDY70557	Canola	extracellular, plasma membrane	21.93	37.9
CDX84735	Canola	plasma membrane	36.16	37.5
CDX95758	Canola	cytosol	16.5	37.35
CDY12211	Canola	plasma membrane	34.53	35.77
CDX75490	Canola	extracellular, plasma membrane, vacuole	22.15	35.05
CDY31759	Canola	cytosol, peroxisome, plasma membrane	15.74	30.79
CDX72325	Canola	plasma membrane	21.5	29.38
CDY51113	Canola	plasma membrane	27.14	29.1
CDY54213	Canola	plasma membrane	28.01	29.02
CDX85724	Canola	plasma membrane	26.93	28.87
CDY70035	Canola	cytosol, plasma membrane	25.3	28.8
CDY31756	Canola	cytosol, peroxisome, plastid	27.04	28.69
CDY36173	Canola	plasma membrane	25.08	28.66
CDY00544	Canola	plasma membrane	24.21	28.63
CDY45595	Canola	plasma membrane	26.71	28.6
CDY58212	Canola	cytosol, plasma membrane	25.73	28.42
CDY31755	Canola	cytosol	27.47	27.41
CDY56837	Canola	plasma membrane	27.25	27.34
CDX73196	Canola	cytosol, peroxisome, plasma membrane	26.82	27.05
CDY38574	Canola	plasma membrane	28.01	26.68
CDY39533	Canola	plasma membrane	28.12	26.67
CDY50141	Canola	plasma membrane	15.31	26.6
CDY68132	Canola	plasma membrane	27.8	25.37
CDY13449	Canola	cytosol	25.95	24.92
CDY63640	Canola	cytosol	12.27	20.81
CDY72467	Canola	cytosol	0.11	1.35

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	GO:A0A078FCW0	UniProt:A0A078FCW0
InterPro:ANF_lig-bd_rcpt	EnsemblPlants:CDY12210	ProteinID:CDY12210	ProteinID:CDY12210.1	GO:GO:0003674	GO:GO:0004871
GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235
GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00061229001	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF15	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI0004EE09F5	SEG:seg	:	:	:	:

Description

BnaC04g12400DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078FCW0]

Coordinates

chrLK032018:+:451634..455562

Molecular Weight (calculated)

102827.0 Da

IEP (calculated)

7.996

GRAVY (calculated)

0.074

Length

921 amino acids

Sequence
(BLAST)

001: MGFGIDSSVA ITALIVAILV VPMGCQRPQV VNLGAVFTFD SVIGRAAKVA LEAAVSDVNA DTSVLKDTEL RLLMKDSSCN VFHGSFGAFE VLEKEVVAMI
101: GPLSSSVAHT LSDIAKGLQF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLISF HGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDDKSIA NALNKSKSLG PRVYILHFGP DPSLRIFSIV QKLQMMTNEY VWLATDWLAV TLDSSVSDSS TLKRLEGVVG LRQHIPESVK MHQFTHKMKS
301: NKSMNAYAFH AYDTLWMIAY GIEKMLNEGL SITFSYSEKL IQAQGAKLHL ERVKIFNSGK LLLEKLLQVN FTGIAGQVQF GSGRNVIGCD YEIINVDRTG
401: VHTVGFWSKH GGFSVVAPET RHTRNKSGFA FEEKLGNITW PGGGREKPRG WVIADAANPL KIVIPKRVSF VEFVTEENNS SHRIKGLCID IFTEALKFVP
501: YSVPYVFESF GDGRSSPNYN QMIQMVADGV YDAAVGDIAI VPTRSKLVDF SQPYASTGLV VVIPANDDNA TWIFLRPFTI GLWCVVIASF FCIAIVMWIL
601: EHRINEDFRG PPRRQLITMI LFSFSTLFKR NQEDTISNLA RLVMIVWLFL LMVLTASYTA NLTSILTVQQ LPSAITGIDS LRASEVPVGY QSGTFTLEYL
701: TYSLGMARSR LVPLESTDEY ERALKLGPTN FGGVAAIVDE LPYIELFLAE RPGFKIVGEP FMHRGWGFAF KRDSPLAIDM STAILKLAET RKLQEIRKRW
801: LCNTSCAEKS NWNPEPNQLH LKSFKGLYLA CIAITVSAFL VFVLRMIRQF VRYRRMERTS SLPLASWSSS PSMRLRELVF GFVEFVDEKE EAIKRMFRSD
901: DSSNNPSHVV EVQADSEVRQ I

Best Arabidopsis Sequence Match ( AT2G32400.1 )
(BLAST)

001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N

Arabidopsis Description

GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.