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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75491 Canola cytosol, plasma membrane, plastid 21.82 97.55
CDX75490 Canola extracellular, plasma membrane, vacuole 59.21 92.78
CDY65624 Canola plasma membrane 84.87 88.97
AT4G35290.2 Thale cress plasma membrane 85.96 85.96
CDY71348 Canola golgi, plasma membrane 24.89 85.66
CDX76331 Canola plasma membrane 85.09 85.27
CDY24327 Canola plasma membrane 78.4 78.4
CDY52597 Canola plasma membrane 78.07 78.07
VIT_03s0038g03920.t01 Wine grape plasma membrane 61.95 61.61
KRH14012 Soybean plasma membrane 59.76 59.56
CDY35797 Canola plasma membrane 50.11 55.6
GSMUA_Achr9P23900_001 Banana plasma membrane 55.15 54.79
GSMUA_Achr3P27050_001 Banana plasma membrane 54.71 54.54
CDX95758 Canola cytosol 23.46 52.58
GSMUA_Achr5P19180_001 Banana plasma membrane 51.75 52.44
CDX78008 Canola plasma membrane 51.21 52.41
CDX73718 Canola plasma membrane 51.21 52.41
KRH74102 Soybean cytosol, nucleus, peroxisome 37.17 52.23
Zm00001d015007_P003 Maize plasma membrane 51.32 51.94
CDY06165 Canola plasma membrane 49.01 51.32
Os02t0117500-01 Rice plasma membrane 52.85 51.06
TraesCS6B01G066200.1 Wheat plasma membrane 51.54 51.03
TraesCS6A01G049900.1 Wheat plasma membrane 51.43 50.81
HORVU0Hr1G018770.1 Barley plasma membrane 44.74 50.81
TraesCSU01G108800.1 Wheat plasma membrane 51.32 50.7
TraesCS2B01G477300.4 Wheat plasma membrane 50.88 50.49
TraesCS2A01G455200.2 Wheat plasma membrane 50.88 50.49
TraesCS2D01G455600.2 Wheat plasma membrane 50.66 50.27
Zm00001d002532_P003 Maize plasma membrane 51.32 50.27
KXG29299 Sorghum plasma membrane 50.88 50.11
TraesCS6A01G048700.1 Wheat plasma membrane 50.88 50.11
TraesCSU01G107900.1 Wheat plasma membrane 50.77 50.0
TraesCS6A01G048800.1 Wheat plasma membrane 50.77 50.0
TraesCSU01G107700.2 Wheat plasma membrane 50.66 49.89
HORVU0Hr1G036590.3 Barley plasma membrane 50.99 49.84
HORVU2Hr1G049510.4 Barley plasma membrane 50.99 49.84
TraesCS6B01G065400.1 Wheat plasma membrane 50.55 49.78
TraesCS6B01G065700.1 Wheat plasma membrane 50.33 49.73
KXG26996 Sorghum plasma membrane 50.88 49.63
HORVU6Hr1G009520.1 Barley plasma membrane 50.33 49.57
TraesCS6B01G065500.1 Wheat plasma membrane 50.33 49.57
CDY10044 Canola plasma membrane 50.99 49.52
TraesCSU01G108000.1 Wheat plasma membrane 50.11 49.46
TraesCS6A01G049000.1 Wheat plasma membrane 50.22 49.19
CDX80728 Canola cytosol 13.05 49.17
OQU84212 Sorghum mitochondrion 48.9 49.06
HORVU2Hr1G104920.3 Barley plasma membrane 50.88 48.84
CDY49512 Canola plasma membrane 50.99 48.79
Zm00001d054016_P004 Maize plasma membrane 50.88 48.79
CDY46839 Canola plasma membrane 50.77 48.69
Zm00001d033769_P001 Maize golgi, plasma membrane 33.0 47.7
CDY70557 Canola extracellular, plasma membrane 27.85 47.65
CDY68928 Canola extracellular, plasma membrane 27.74 47.47
Os04t0585200-02 Rice extracellular 28.07 47.41
CDY66698 Canola plasma membrane 41.34 42.41
PGSC0003DMT400038012 Potato plasma membrane 56.91 42.26
CDX84735 Canola plasma membrane 41.01 42.12
CDX84734 Canola plasma membrane 42.21 41.58
CDY66699 Canola plasma membrane 42.11 41.47
CDY15337 Canola plasma membrane 40.35 41.16
CDY48270 Canola plasma membrane 41.34 40.89
CDY12210 Canola plasma membrane 41.12 40.72
CDY48271 Canola plastid 32.57 40.19
CDY12211 Canola plasma membrane 38.05 39.03
CDY31759 Canola cytosol, peroxisome, plasma membrane 16.78 32.48
CDY70035 Canola cytosol, plasma membrane 28.29 31.89
CDY31756 Canola cytosol, peroxisome, plastid 30.04 31.57
CDY58212 Canola cytosol, plasma membrane 28.29 30.94
CDY31755 Canola cytosol 30.92 30.55
CDY54213 Canola plasma membrane 29.39 30.15
CDY39533 Canola plasma membrane 31.8 29.87
CDX72325 Canola plasma membrane 22.04 29.82
CDY38574 Canola plasma membrane 31.03 29.27
CDY50141 Canola plasma membrane 17.0 29.25
CDY36173 Canola plasma membrane 25.22 28.54
CDY56837 Canola plasma membrane 28.4 28.21
CDY51113 Canola plasma membrane 26.54 28.17
CDX85724 Canola plasma membrane 26.43 28.06
CDY00544 Canola plasma membrane 23.9 27.98
CDY45595 Canola plasma membrane 26.32 27.91
CDX73196 Canola cytosol, peroxisome, plasma membrane 26.97 26.94
CDY68132 Canola plasma membrane 27.85 25.17
CDY13449 Canola cytosol 26.32 25.03
CDY63640 Canola cytosol 13.38 22.47
Os02t0117600-01 Rice plastid 0.11 0.41
CDY72467 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078BXP6InterPro:ANF_lig-bd_rcpt
EnsemblPlants:CDX69127ProteinID:CDX69127ProteinID:CDX69127.1GO:GO:0003674GO:GO:0004871GO:GO:0004970
GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00130913001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PANTHER:PTHR43891PANTHER:PTHR43891:SF18InterPro:Peripla_BP_I
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelix
UniParc:UPI0004EEC041SEG:seg::::
Description
BnaC01g03260D
Coordinates
chrLK031789:+:3078876..3083966
Molecular Weight (calculated)
101592.0 Da
IEP (calculated)
8.554
GRAVY (calculated)
0.023
Length
912 amino acids
Sequence
(BLAST)
001: MFWVLALLSS FIVLSGDGLL SEGASSRPHD INVGAIFSLS TLYGQVADIA MKAAEEDVNS DPTFLNGSKL RILMYDAKRN GFLSIMKALQ FMETDSVAII
101: GPQTSIMAHV LSYLGNELHV PMCSFTALDP SLSPLQFPFF VQTAPSDLFL MRAVAEMITY YGWSDVIALY NDDDNSRNGV TSLGDELEGR RCKISYKAVL
201: PLDVVIESPR EIVDELVKIQ GMESRVIIVN TFPKTGRMIF KEAKRLGMMG RGYVWIATTW MTSLLDSANP LSLPKVAKSL TGVLTLRIHT PESRKKRDFA
301: ARWKKLSNGT VGLNVYGLYA YDTVWIIARA VKSLLDSGAN ISFSSDSRLN HLKGGTLNLA ALSMFDQGQQ FLDYIVETKM SGVTGRVQFL PDRSMIQPAY
401: DIINVVGDGL RQIGYWSNHS GLSVIPPELL FSKPSNRSSS NQHLKNVTWP GGGSVTPRGW VFPNNGRRLR IGVPNRASFK DFVSRVNGSN QIDGYSINVF
501: EAAVKLLSYP VPHEFVLFGD GLKNPNYNDL VNNLTTGVFD AVVGDIAIVT KRTRIVDFTQ PYIESGLVVV APVTKLNDTP WAFLRPFTPP MWAVTAVFFL
601: IVGSVIWILE HRINDDFRGP PRRQIVTILW FSFSTMFFSH RENTVSTLGR IVLLIWLFVV LIITSSYTAS LTSILTVQQL NSPIKGVDTL IRSSGRVGFQ
701: VGSYAENYMI DELNIARSRL VALGSPKEYA TALQNGTVAA IVDERPYVDL FLSEFCGFAI RGQEFTRSGW GFAFPRDSPL AVDMSTAILG LSETGKLQKI
801: HDKWLSKSNC SNLNGSQSDD DPEQLKLRSF WGLFLLCGIA CFIALFIYFF MIVRDFCNHH KKPEEEEATV PSPEGSRSKT LQTFLAYFDE KEAESNRRLK
901: RKRNDDLSLK SS
Best Arabidopsis Sequence Match ( AT4G35290.4 )
(BLAST)
001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI
Arabidopsis Description
GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.