CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 3
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015007_P003	Maize	plasma membrane	82.29	83.02
Zm00001d033769_P001	Maize	golgi, plasma membrane	57.54	82.88
KXG29299	Sorghum	plasma membrane	83.83	82.29
Zm00001d054016_P004	Maize	plasma membrane	82.29	78.65
TraesCS6B01G066200.1	Wheat	plasma membrane	73.93	72.96
TraesCSU01G108800.1	Wheat	plasma membrane	74.04	72.91
TraesCS6A01G048800.1	Wheat	plasma membrane	73.71	72.35
TraesCS6A01G049900.1	Wheat	plasma membrane	73.16	72.05
TraesCSU01G107900.1	Wheat	plasma membrane	73.16	71.81
TraesCS6B01G065500.1	Wheat	plasma membrane	73.16	71.81
HORVU0Hr1G036590.3	Barley	plasma membrane	73.49	71.6
HORVU2Hr1G049510.4	Barley	plasma membrane	73.49	71.6
Os02t0117500-01	Rice	plasma membrane	74.04	71.29
TraesCS6A01G048700.1	Wheat	plasma membrane	72.5	71.17
HORVU0Hr1G018770.1	Barley	plasma membrane	62.82	71.11
TraesCSU01G108000.1	Wheat	plasma membrane	72.28	71.1
TraesCS6B01G065700.1	Wheat	plasma membrane	72.17	71.07
TraesCS6A01G049000.1	Wheat	plasma membrane	72.72	71.0
TraesCSU01G107700.2	Wheat	plasma membrane	72.17	70.84
HORVU6Hr1G009520.1	Barley	plasma membrane	72.06	70.73
TraesCS6B01G065400.1	Wheat	plasma membrane	72.06	70.73
GSMUA_Achr9P23900_001	Banana	plasma membrane	58.31	57.73
GSMUA_Achr3P27050_001	Banana	plasma membrane	57.98	57.6
KRH60898	Soybean	plasma membrane	54.13	53.19
KXG26996	Sorghum	plasma membrane	54.35	52.83
KRH51581	Soybean	plasma membrane	53.8	52.64
VIT_18s0122g00990.t01	Wine grape	plasma membrane	54.02	52.57
VIT_07s0031g02170.t01	Wine grape	plasma membrane	53.36	51.82
Solyc04g082610.2.1	Tomato	plasma membrane	52.81	51.72
CDY35797	Canola	plasma membrane	46.31	51.22
PGSC0003DMT400025675	Potato	plasma membrane	51.49	50.27
Bra034931.1-P	Field mustard	plasma membrane	51.27	50.16
VIT_03s0038g03920.t01	Wine grape	plasma membrane	50.16	49.73
AT1G42540.2	Thale cress	plasma membrane	50.94	49.62
AT4G35290.2	Thale cress	plasma membrane	49.73	49.56
KRH39417	Soybean	golgi, plasma membrane, plastid	50.61	49.46
CDY70557	Canola	extracellular, plasma membrane	28.93	49.34
KRH14012	Soybean	plasma membrane	49.51	49.18
CDY68928	Canola	extracellular, plasma membrane	28.82	49.16
Bra011603.1-P	Field mustard	plasma membrane	49.28	49.07
KRH07800	Soybean	plasma membrane	49.39	49.02
KRH39414	Soybean	plasma membrane	50.72	48.94
CDX69127	Canola	plasma membrane	49.06	48.9
CDY52597	Canola	plasma membrane	48.84	48.68
CDX76331	Canola	plasma membrane	48.73	48.68
CDY71348	Canola	golgi, plasma membrane	14.19	48.68
CDY24327	Canola	plasma membrane	48.73	48.57
Solyc02g082480.2.1	Tomato	plasma membrane	50.94	48.33
CDY65624	Canola	plasma membrane	46.09	48.16
KRH76527	Soybean	plasma membrane	49.06	47.55
EER97313	Sorghum	plasma membrane	48.29	47.51
AT2G17260.1	Thale cress	plasma membrane	48.18	47.35
KRH28939	Soybean	plasma membrane	48.84	47.33
KRH39412	Soybean	plasma membrane	49.17	47.2
CDX73718	Canola	plasma membrane	46.2	47.14
Bra036795.1-P	Field mustard	plasma membrane	45.87	46.8
CDX78008	Canola	plasma membrane	45.87	46.8
AT3G51480.1	Thale cress	plasma membrane	46.31	46.62
EER90229	Sorghum	plasma membrane	47.41	46.54
CDX95758	Canola	cytosol	20.79	46.44
KXG20638	Sorghum	plasma membrane	48.07	45.52
EER95720	Sorghum	plastid	48.4	45.22
KXG20640	Sorghum	plasma membrane	45.65	44.62
CDX75491	Canola	cytosol, plasma membrane, plastid	10.01	44.61
CDX80728	Canola	cytosol	11.66	43.8
CDX75490	Canola	extracellular, plasma membrane, vacuole	27.72	43.3
EER95721	Sorghum	plastid	45.1	41.79
KRH74102	Soybean	cytosol, nucleus, peroxisome	29.37	41.14
Bra020812.1-P	Field mustard	plasma membrane	41.58	37.28
PGSC0003DMT400038012	Potato	plasma membrane	47.74	35.34
KXG19504	Sorghum	golgi, plasma membrane, vacuole	29.04	30.31
OQU89536	Sorghum	cytosol	28.38	28.54
KXG35672	Sorghum	mitochondrion, plasma membrane	30.25	28.35
OQU84757	Sorghum	plasma membrane	28.38	28.32
OQU89534	Sorghum	plasma membrane	28.38	28.32
KXG31244	Sorghum	mitochondrion	31.35	28.16
EER98937	Sorghum	plasma membrane	29.04	27.94
OQU89527	Sorghum	plasma membrane	28.16	27.53
EER98936	Sorghum	plasma membrane	28.38	27.27
KXG35671	Sorghum	plasma membrane	29.15	27.04
KXG35670	Sorghum	plasma membrane	27.72	25.79
Os02t0117600-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	UniProt:A0A1Z5RKE9	InterPro:ANF_lig-bd_rcpt
GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	EnsemblPlants:OQU84212
ProteinID:OQU84212	ProteinID:OQU84212.1	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PANTHER:PTHR43891	PANTHER:PTHR43891:SF4	InterPro:Peripla_BP_I	SMART:SM00079	EnsemblPlantsGene:SORBI_3004G013200	SUPFAM:SSF53822
SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000B8BA0BB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:1083077..1088660

Molecular Weight (calculated)

101100.0 Da

IEP (calculated)

7.129

GRAVY (calculated)

0.005

Length

909 amino acids

Sequence
(BLAST)

001: MGRFREGRRH RQLWGVELGR PYTKRRRTGG SRRNPSRRPR FTLSREHKHR YLTLAARPPV VSIGSILQLS STTGGVSDVA IHAAVDDINS DPTILNGTTL
101: QVDTRDTNCD DGFLGMVEAL QYMATDVITI IGPQCSPIAH IIDYVANELQ VPLMSFASDA TLSSIQFPFF VRTMPSDLYQ MAAVAAVVDY YQWKIVTAIY
201: VDDDYGRNGI AALDDELTAR RCKISYKVGF SSKAKTSELI NLLVTVSYME SRVIILHTGS QAGLKLLSIA KALNMMGIGY VWIATDWLSA YLDANSSVPA
301: ETINGMQGVL TVRPHTPKSK MKSNLVARWS SLSKKYNHSD LRISAYGLYV YDSVWTVAHA LDAFFDDGGR ISFTNDSRLS DVTGGKLHLE AMSIFDMGNK
401: LLDKIRNVNF TGVSGQVQFN AQYELIHPAY DIISIIGNGM RTIGFWSNYT RLLSTVLPED QYSKPPNTSL ANQQLYDVIW PGETTQKPRG WAFPCNAQEL
501: KIGVPNRYSF KEVVGLDNAT GSMKGYCIDV FTQALTLLPY PVTYRFIPFG NGTKNPHYDQ LAQMVADNDL DAAIGDIEIT MSRTKIVDFT QPFIESGLVI
601: LAPIEKHNTN PLAFLQPFTL GMWCVTGLSI LVVGVVIWIL EHRINDEFRG SPREQIITIA WFSFSTLFFV QRENTMSTLG RGVLIIWLFV VLILQSSYTA
701: SLTSFLTVQQ LGSSIRGLDD LKHSDYPIGF HVGSFAKEYI INQLNISPSR LKALGSPEEY AENLMLGPKK GGVMAIVDER PYVELFLSTY CKIAVAGSEF
801: TSAGWGFVFP RDSPLQEDMS TAILALSESG ELQRIHDKWL KTADCSIDNT EFVDSNQLRL ESFMGLFLIC GAACVLALLI YFGIMLRQYL RHKKQSGSAI
901: SVDAGLPTS

Best Arabidopsis Sequence Match ( AT1G42540.1 )
(BLAST)

001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

Arabidopsis Description

GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.