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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020563_P001 Maize plasma membrane 83.63 79.41
TraesCS5D01G226500.2 Wheat cytosol 71.57 73.86
Os09t0429500-00 Rice plasma membrane 76.44 73.04
Os09t0429400-00 Rice golgi 74.67 72.27
TraesCS7B01G242400.1 Wheat plasma membrane 70.24 70.17
HORVU5Hr1G063500.1 Barley plasma membrane 71.9 69.97
TraesCS5A01G218400.1 Wheat plasma membrane 71.46 69.76
TraesCS7A01G341200.1 Wheat plasma membrane 68.47 69.16
HORVU7Hr1G081410.3 Barley plasma membrane 43.47 68.71
EER98937 Sorghum plasma membrane 56.31 53.86
EER98936 Sorghum plasma membrane 54.31 51.9
OQU84757 Sorghum plasma membrane 51.11 50.71
OQU89534 Sorghum plasma membrane 50.88 50.49
OQU89527 Sorghum plasma membrane 51.11 49.68
VIT_04s0069g00200.t01 Wine grape cytosol 24.11 49.43
VIT_04s0069g00380.t01 Wine grape cytosol 22.12 48.78
GSMUA_Achr3P04970_001 Banana plasma membrane 51.44 48.59
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 28.76 46.85
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 42.26 46.14
VIT_04s0069g00560.t01 Wine grape plasma membrane 45.35 45.76
GSMUA_Achr9P13570_001 Banana plasma membrane 45.58 45.18
VIT_04s0069g00670.t01 Wine grape plasma membrane 45.24 44.5
VIT_04s0069g00720.t01 Wine grape cytosol 29.2 44.22
VIT_04s0069g00170.t01 Wine grape plasma membrane 45.13 44.06
VIT_04s0069g00540.t01 Wine grape plasma membrane 34.07 43.56
VIT_04s0069g00620.t01 Wine grape plasma membrane 47.01 42.93
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 41.04 42.84
Solyc08g006500.2.1 Tomato extracellular 44.8 41.71
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 27.32 41.65
VIT_04s0069g00060.t01 Wine grape plasma membrane 44.8 41.37
CDY70035 Canola cytosol, plasma membrane 36.5 40.79
CDY31756 Canola cytosol, peroxisome, plastid 39.16 40.78
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 42.04 40.69
CDY51113 Canola plasma membrane 38.16 40.16
Bra040760.1-P Field mustard cytosol 37.39 40.14
CDY00544 Canola plasma membrane 34.51 40.05
VIT_04s0069g00230.t01 Wine grape plasma membrane 45.13 39.88
AT2G29100.2 Thale cress plasma membrane 41.48 39.81
CDX72325 Canola plasma membrane 29.65 39.76
Bra023313.1-P Field mustard plasma membrane 37.72 39.7
KRH50533 Soybean plasma membrane 35.18 39.65
AT2G29110.2 Thale cress plasma membrane 41.48 39.56
Bra032072.1-P Field mustard plasma membrane 39.16 39.51
CDX85724 Canola plasma membrane 37.5 39.46
AT5G27100.1 Thale cress plasma membrane 39.27 39.4
CDY31755 Canola cytosol 40.15 39.33
CDX73196 Canola cytosol, peroxisome, plasma membrane 39.71 39.32
CDY58212 Canola cytosol, plasma membrane 36.17 39.21
AT2G29120.1 Thale cress plasma membrane 41.15 39.08
AT5G11210.5 Thale cress plasma membrane 39.6 39.0
Bra040761.1-P Field mustard cytosol 40.15 38.99
KRH50532 Soybean plasma membrane 34.85 38.99
AT2G24720.1 Thale cress plasma membrane 39.6 38.91
CDY36173 Canola plasma membrane 34.62 38.83
Bra032063.1-P Field mustard plasma membrane 39.49 38.68
CDY38574 Canola plasma membrane 41.37 38.68
PGSC0003DMT400023744 Potato cytosol 37.39 38.67
CDY54213 Canola plasma membrane 37.83 38.47
CDY39533 Canola plasma membrane 41.26 38.41
CDY31759 Canola cytosol, peroxisome, plasma membrane 19.8 38.0
CDY45595 Canola plasma membrane 35.73 37.56
AT5G11180.2 Thale cress plasma membrane 39.82 37.23
AT2G24710.3 Thale cress plasma membrane 37.61 37.0
CDY56837 Canola plasma membrane 37.17 36.6
AT4G31710.2 Thale cress plasma membrane 36.73 36.4
KXG19504 Sorghum golgi, plasma membrane, vacuole 34.73 36.05
Bra015817.1-P Field mustard plasma membrane 39.49 35.38
CDY68132 Canola plasma membrane 39.49 35.38
KXG35670 Sorghum plasma membrane 37.83 35.01
KXG31244 Sorghum mitochondrion 39.05 34.88
CDY50141 Canola plasma membrane 20.13 34.34
KXG35671 Sorghum plasma membrane 37.17 34.29
KXG35672 Sorghum mitochondrion, plasma membrane 36.73 34.23
CDY63640 Canola cytosol 20.35 33.89
CDY13449 Canola cytosol 34.62 32.64
Bra023989.1-P Field mustard cytosol 34.62 31.78
KXG20640 Sorghum plasma membrane 29.98 29.14
EER97313 Sorghum plasma membrane 29.76 29.11
KXG26996 Sorghum plasma membrane 30.09 29.09
EER90229 Sorghum plasma membrane 29.65 28.94
KXG29299 Sorghum plasma membrane 29.2 28.51
OQU84212 Sorghum mitochondrion 28.54 28.38
KXG20638 Sorghum plasma membrane 29.98 28.23
EER95720 Sorghum plastid 29.98 27.85
EER95721 Sorghum plastid 30.09 27.73
VIT_04s0069g00330.t01 Wine grape plastid 45.35 23.3
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1W0W5C0InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004930GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0007186GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:GPCR_3
InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:OQU89536ProteinID:OQU89536ProteinID:OQU89536.1PFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR00248PANTHER:PTHR43891PANTHER:PTHR43891:SF19
InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G208900SUPFAM:SSF53822SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelixUniParc:UPI0009DC855CSEG:seg:::
Description
hypothetical protein
Coordinates
chr2:-:60079331..60086802
Molecular Weight (calculated)
100483.0 Da
IEP (calculated)
7.434
GRAVY (calculated)
-0.081
Length
904 amino acids
Sequence
(BLAST)
001: MAHTSILMAM EDFYAVHRDY KTKLVLHIRD SNAGNVQAAS EAVDLLKNYN VRAIIGPQKS SEATFVSDLG NKSQVPVISF TATSPTLTSG SMPYFLRATP
101: SDAAQVNCIA ALIKGYGWRE VVPIYEDTDY GRGIIPYLVD SLQEFGASVP YRSVIPVSAS SDQVERELYK LMTMPTRVYI VHMSSSIAST LFTKANELGM
201: MSEMYAWILT DGIANIVNSL NPPILDSMNG ALGVKFYVPK SKELDDFTAR WDKRFKQDYP NDPSAQLGTF GLWGYDTIWA LAQAAEKVNM VNAIFQKQQD
301: KKPSTCFETL GISTIGPKLI DAILQNKFRG LSGDFDLKNK QLQPSTFQII NVVGGGSQGI GFWTAKHGII RTLDQNASKT TNANSMLELN PVIWPGKVYV
401: VPKGWQIPTN GKKLRVGVRT SGYPEFMKVE RDPITNATTA TGYAIDVFEE VLRGLPYAIH YEYVAFDHEG ASYNDFVYQV HLRVYDVAIG DITIRYNRTS
501: YVDFTLPYTE SGVAMIVPVK DDTNKNTWVF LKPLTTDLWF GSIAFFIYTG IVIWLLERRI NNAELAGSFF RQLGIAIYFS FFADRERVDS ILSRLVVIVW
601: VFVLVVITSS YTANLSSILT VQQLQPTVTD VHELIRKGEY VGYHSGSYVG NLLEELGFDR RKIRAYKTLE DFADALSKGG KNGGIAAVIH EVPYIKIFLA
701: KHCKGYTMVG PIYKSEGFGF ALPKRSPMVN DFSRRILSIT EGDAIIQIEK KWIGDQHVCQ NDGAIASPSS LNFRSFSGLF LVTGVASTSA LLIALVMFLY
801: KNKHKIRNSI SRVQTKGGYG SAHANSQNQE RELYCNQAQS MQVTVSNDLD DDACQQEIEI SIEVSSPGSG FPSGPGFASC ETPSNSVVQC KSAYSRFFTP
901: HEHM
Best Arabidopsis Sequence Match ( AT2G29120.1 )
(BLAST)
001: MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK
101: NEQVSAIIGP RTSMQAEFMI RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD NEFGEGILPL LTDALQDVQA
201: FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN
301: FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD
401: VINIIGSEER IIGLWRPSNG IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI DPISNAMTPT GYCIEIFEAV
501: LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV
601: WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR
701: ELLKSQGFDE SQLKPFGSAV ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR AILNVTQGEE MQHIENKWFK
801: KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP
901: LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE
Arabidopsis Description
GLR2.7Glutamate receptor 2.7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.