Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018615_P001 | Maize | plasma membrane | 77.17 | 78.85 |
| EER95720 | Sorghum | plastid | 71.15 | 71.74 |
| TraesCS2D01G265700.1 | Wheat | plasma membrane | 61.26 | 64.9 |
| TraesCS2B01G285400.1 | Wheat | plasma membrane | 61.26 | 64.76 |
| TraesCS2A01G257200.1 | Wheat | plasma membrane | 61.16 | 64.59 |
| Os07t0103100-01 | Rice | plasma membrane | 57.49 | 59.0 |
| Solyc05g045650.2.1 | Tomato | plasma membrane | 48.93 | 54.73 |
| Solyc07g052400.2.1 | Tomato | cytosol | 44.75 | 54.13 |
| PGSC0003DMT400013497 | Potato | plasma membrane | 50.76 | 52.48 |
| PGSC0003DMT400065539 | Potato | plasma membrane | 50.15 | 52.28 |
| KRH25388 | Soybean | plasma membrane | 49.24 | 52.27 |
| VIT_12s0059g02270.t01 | Wine grape | plasma membrane | 48.93 | 51.95 |
| KRH56121 | Soybean | plasma membrane | 49.13 | 51.88 |
| EER97313 | Sorghum | plasma membrane | 48.83 | 51.84 |
| KXG20640 | Sorghum | plasma membrane | 49.03 | 51.72 |
| KRH26793 | Soybean | plasma membrane | 49.64 | 51.43 |
| EER90229 | Sorghum | plasma membrane | 48.42 | 51.3 |
| CDY06165 | Canola | plasma membrane | 45.26 | 50.98 |
| KRH22559 | Soybean | plasma membrane | 49.03 | 50.79 |
| KXG20638 | Sorghum | plasma membrane | 49.54 | 50.62 |
| Bra015398.1-P | Field mustard | plasma membrane | 47.6 | 49.11 |
| CDY46839 | Canola | plasma membrane | 47.5 | 49.0 |
| CDY49512 | Canola | plasma membrane | 47.5 | 48.9 |
| CDY10044 | Canola | plasma membrane | 46.79 | 48.88 |
| KXG26996 | Sorghum | plasma membrane | 46.48 | 48.77 |
| AT1G05200.1 | Thale cress | plasma membrane | 47.09 | 48.18 |
| Bra032480.1-P | Field mustard | plasma membrane | 46.59 | 47.55 |
| Bra005589.1-P | Field mustard | plasma membrane | 45.67 | 47.41 |
| AT2G32390.5 | Thale cress | plasma membrane | 45.97 | 47.32 |
| KXG29299 | Sorghum | plasma membrane | 44.55 | 47.19 |
| OQU84212 | Sorghum | mitochondrion | 41.79 | 45.1 |
| CDY66698 | Canola | plasma membrane | 39.96 | 44.09 |
| CDX84735 | Canola | plasma membrane | 39.04 | 43.13 |
| CDY48271 | Canola | plastid | 31.7 | 42.08 |
| CDY12211 | Canola | plasma membrane | 37.31 | 41.17 |
| KXG19504 | Sorghum | golgi, plasma membrane, vacuole | 28.34 | 31.92 |
| KXG31244 | Sorghum | mitochondrion | 31.5 | 30.53 |
| OQU89536 | Sorghum | cytosol | 27.73 | 30.09 |
| KXG35671 | Sorghum | plasma membrane | 29.87 | 29.9 |
| OQU89534 | Sorghum | plasma membrane | 27.73 | 29.86 |
| OQU84757 | Sorghum | plasma membrane | 27.52 | 29.64 |
| OQU89527 | Sorghum | plasma membrane | 27.73 | 29.25 |
| EER98937 | Sorghum | plasma membrane | 27.52 | 28.57 |
| EER98936 | Sorghum | plasma membrane | 27.32 | 28.33 |
| KXG35670 | Sorghum | plasma membrane | 28.03 | 28.15 |
| KXG35672 | Sorghum | mitochondrion, plasma membrane | 27.42 | 27.73 |
Protein Annotations
| Gene3D:1.10.287.70 | MapMan:24.3.9 | Gene3D:3.40.190.10 | Gene3D:3.40.50.2300 | InterPro:ANF_lig-bd_rcpt | UniProt:C5X741 |
| EnsemblPlants:EER95721 | ProteinID:EER95721 | ProteinID:EER95721.2 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0004970 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035235 | GO:GO:0038023 |
| InterPro:Iontro_rcpt | InterPro:Iontropic_Glu_rcpt_pln | PFAM:PF00060 | PFAM:PF00497 | PFAM:PF01094 | PIRSF:PIRSF037090 |
| PRINTS:PR01176 | PANTHER:PTHR43891 | PANTHER:PTHR43891:SF7 | InterPro:Peripla_BP_I | SMART:SM00079 | EnsemblPlantsGene:SORBI_3002G002800 |
| SUPFAM:SSF53822 | SUPFAM:SSF53850 | SignalP:SignalP-noTM | InterPro:Solute-binding_3/MltF_N | TMHMM:TMhelix | UniParc:UPI00081AD241 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:379435..383958
Molecular Weight (calculated)
105819.0 Da
IEP (calculated)
4.560
GRAVY (calculated)
0.058
Length
981 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMVMASSAA TTSTSSSTLL LRLLCLCTVL PVTLQAARPT NITIGALFAF DSVIGRSART AIQLAVDDVN RDPTVLSGTN LSVIFQDTKC SGFVATIQAG
101: MELMEKEVVA VVGPESSVIA HVVSNVANEL RVPLVSFAAT DPALASSQYP YLVRAVHDDR FQMAAVADIV SLYGWREVTA VYVDDDYGRG GVAALTDALQ
201: PTRARVTYKT AFPRGADRAT LANLLQLANS MESRVFVVHA SPDSGLDVFA AAHDLGMMVA EYAWIATDWF AAAAIDGAPA AASESNNNII QGVLTLRQYI
301: PDSDAKASLV SRLAGAAIPP SSNNDATVAA NAYSLFAYDS VWIAAHAIDQ FLDEAAGNVT FSADPNIRDA NGSALRLSAL RVFDQGDQLL RKVMLANFTG
401: VTGQVAFQFD ADGNNGTGSG TLINPAYEIL NVAGGNTGVR RVAYWSNYTR LSVDAPTLLD DGGPPPNSTS TSTTPQQQQQ MSNVTWPGGM TTTPRGWVFA
501: DNGTPLRVGV PYRTSDTEFV SKDDTSKDGV SGYCIDVFEA ALQQLPYPVP VSFVLFGDGV TSPSYDELVQ KVADGFFDAA VGDISIVTNR TRVVDFTQPY
601: IDSGLVIVST VKSSSSDEWA FLKPFTPELW GTFVAMCVFV GAVIWILEHR HNEEFRGSLW NQMRTLFWFS FSAIFFTQRE ETISSLGRFV VIMWLVVVLI
701: ITQSYTASLT SILTVQQLST GIQGINDLLA SNDPIGYQQG SFAGSYLINE LGVKASRLRE LAIEEYADRL QRGPRDGGVV AIVDELPYVE LFLSSNCQFT
801: MVGQEFTKGG WGFAFPHESP LAVDLSTAIL KLSETGDLQR IHDNWLNQGT CDTQSQGTGG GALRLSVANF GGLFLICGVA CGVALLIYFA RILFQFYQYH
901: RHGTTDGGAK EEEEDGGGGP FPDKERSMRW RLATRQSSFR DLMYFVDMKE SEVKAAMAVR SSSTKSTARS RSDTSDGPSS P
101: MELMEKEVVA VVGPESSVIA HVVSNVANEL RVPLVSFAAT DPALASSQYP YLVRAVHDDR FQMAAVADIV SLYGWREVTA VYVDDDYGRG GVAALTDALQ
201: PTRARVTYKT AFPRGADRAT LANLLQLANS MESRVFVVHA SPDSGLDVFA AAHDLGMMVA EYAWIATDWF AAAAIDGAPA AASESNNNII QGVLTLRQYI
301: PDSDAKASLV SRLAGAAIPP SSNNDATVAA NAYSLFAYDS VWIAAHAIDQ FLDEAAGNVT FSADPNIRDA NGSALRLSAL RVFDQGDQLL RKVMLANFTG
401: VTGQVAFQFD ADGNNGTGSG TLINPAYEIL NVAGGNTGVR RVAYWSNYTR LSVDAPTLLD DGGPPPNSTS TSTTPQQQQQ MSNVTWPGGM TTTPRGWVFA
501: DNGTPLRVGV PYRTSDTEFV SKDDTSKDGV SGYCIDVFEA ALQQLPYPVP VSFVLFGDGV TSPSYDELVQ KVADGFFDAA VGDISIVTNR TRVVDFTQPY
601: IDSGLVIVST VKSSSSDEWA FLKPFTPELW GTFVAMCVFV GAVIWILEHR HNEEFRGSLW NQMRTLFWFS FSAIFFTQRE ETISSLGRFV VIMWLVVVLI
701: ITQSYTASLT SILTVQQLST GIQGINDLLA SNDPIGYQQG SFAGSYLINE LGVKASRLRE LAIEEYADRL QRGPRDGGVV AIVDELPYVE LFLSSNCQFT
801: MVGQEFTKGG WGFAFPHESP LAVDLSTAIL KLSETGDLQR IHDNWLNQGT CDTQSQGTGG GALRLSVANF GGLFLICGVA CGVALLIYFA RILFQFYQYH
901: RHGTTDGGAK EEEEDGGGGP FPDKERSMRW RLATRQSSFR DLMYFVDMKE SEVKAAMAVR SSSTKSTARS RSDTSDGPSS P
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.