CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 4
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005783_P002	Maize	plasma membrane	87.53	87.08
TraesCS5D01G225900.1	Wheat	golgi	62.99	70.55
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	70.52	69.94
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	68.14	69.58
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	70.41	69.55
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	63.92	69.35
TraesCS5A01G218200.1	Wheat	plasma membrane	69.28	69.35
TraesCS5A01G218000.1	Wheat	plasma membrane	70.0	69.29
HORVU5Hr1G063440.1	Barley	plasma membrane	69.69	68.84
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	69.28	68.78
TraesCS5D01G226300.1	Wheat	plasma membrane	67.94	68.57
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	38.04	68.46
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	69.48	68.01
GSMUA_Achr6P01870_001	Banana	cytosol	47.53	52.63
VIT_04s0069g00560.t01	Wine grape	plasma membrane	40.41	43.75
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	37.22	43.6
VIT_04s0069g00170.t01	Wine grape	plasma membrane	40.62	42.55
VIT_04s0069g00670.t01	Wine grape	plasma membrane	40.31	42.55
VIT_04s0069g00540.t01	Wine grape	plasma membrane	30.93	42.43
KRH50533	Soybean	plasma membrane	34.95	42.27
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	23.81	41.62
VIT_04s0069g00200.t01	Wine grape	cytosol	18.87	41.5
VIT_04s0069g00620.t01	Wine grape	plasma membrane	41.96	41.11
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	36.7	41.11
CDY31759	Canola	cytosol, peroxisome, plasma membrane	19.9	40.98
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.64	40.3
VIT_04s0069g00720.t01	Wine grape	cytosol	24.74	40.2
AT2G29100.2	Thale cress	plasma membrane	38.87	40.02
VIT_04s0069g00060.t01	Wine grape	plasma membrane	40.31	39.94
VIT_04s0069g00380.t01	Wine grape	cytosol	16.6	39.27
KRH50532	Soybean	plasma membrane	32.58	39.11
CDY50141	Canola	plasma membrane	21.24	38.87
VIT_04s0069g00230.t01	Wine grape	plasma membrane	40.93	38.81
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.22	38.65
AT2G29110.2	Thale cress	plasma membrane	37.63	38.5
Solyc08g006500.2.1	Tomato	extracellular	38.45	38.41
CDY70035	Canola	cytosol, plasma membrane	31.96	38.32
CDY31756	Canola	cytosol, peroxisome, plastid	34.12	38.13
CDY31755	Canola	cytosol	36.19	38.03
KXG19504	Sorghum	golgi, plasma membrane, vacuole	34.02	37.89
Bra040761.1-P	Field mustard	cytosol	36.19	37.7
Bra040760.1-P	Field mustard	cytosol	32.68	37.65
CDY58212	Canola	cytosol, plasma membrane	32.27	37.53
KXG31244	Sorghum	mitochondrion	38.66	37.06
Bra023313.1-P	Field mustard	plasma membrane	32.78	37.02
CDY51113	Canola	plasma membrane	32.78	37.02
OQU84757	Sorghum	plasma membrane	34.74	36.99
EER98937	Sorghum	plasma membrane	35.98	36.93
CDX85724	Canola	plasma membrane	32.68	36.9
OQU89536	Sorghum	cytosol	34.23	36.73
CDY38574	Canola	plasma membrane	36.6	36.71
CDY39533	Canola	plasma membrane	36.7	36.66
AT2G29120.1	Thale cress	plasma membrane	35.57	36.24
KXG35671	Sorghum	plasma membrane	36.49	36.12
OQU89527	Sorghum	plasma membrane	34.54	36.02
OQU89534	Sorghum	plasma membrane	33.71	35.89
EER98936	Sorghum	plasma membrane	34.64	35.52
AT5G11210.5	Thale cress	plasma membrane	33.4	35.29
AT4G31710.2	Thale cress	plasma membrane	33.09	35.2
Bra032072.1-P	Field mustard	plasma membrane	32.37	35.04
CDX73196	Canola	cytosol, peroxisome, plasma membrane	32.78	34.83
AT5G27100.1	Thale cress	plasma membrane	32.27	34.74
AT2G24720.1	Thale cress	plasma membrane	32.89	34.67
PGSC0003DMT400023744	Potato	cytosol	31.13	34.55
CDY54213	Canola	plasma membrane	31.44	34.31
KXG35670	Sorghum	plasma membrane	34.54	34.29
Bra032063.1-P	Field mustard	plasma membrane	32.16	33.8
CDY00544	Canola	plasma membrane	27.01	33.63
AT2G24710.3	Thale cress	plasma membrane	31.86	33.62
AT5G11180.2	Thale cress	plasma membrane	33.51	33.61
CDX72325	Canola	plasma membrane	23.2	33.38
CDY68132	Canola	plasma membrane	34.54	33.2
Bra015817.1-P	Field mustard	plasma membrane	34.54	33.2
CDY45595	Canola	plasma membrane	29.18	32.91
CDY36173	Canola	plasma membrane	27.01	32.51
CDY56837	Canola	plasma membrane	29.79	31.48
EER97313	Sorghum	plasma membrane	29.79	31.28
KXG29299	Sorghum	plasma membrane	29.18	30.56
KXG26996	Sorghum	plasma membrane	29.18	30.27
OQU84212	Sorghum	mitochondrion	28.35	30.25
KXG20640	Sorghum	plasma membrane	28.97	30.22
EER90229	Sorghum	plasma membrane	28.76	30.13
KXG20638	Sorghum	plasma membrane	29.28	29.58
CDY13449	Canola	cytosol	29.18	29.51
EER95720	Sorghum	plastid	28.97	28.88
Bra023989.1-P	Field mustard	cytosol	28.87	28.43
EER95721	Sorghum	plastid	27.73	27.42
CDY63640	Canola	cytosol	14.85	26.52
VIT_04s0069g00330.t01	Wine grape	plastid	40.52	22.33

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	UniProt:A0A1B6QCM5	InterPro:ANF_lig-bd_rcpt
ncoils:Coil	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
EnsemblPlants:KXG35672	ProteinID:KXG35672	ProteinID:KXG35672.1	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094
PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF6	InterPro:Peripla_BP_I	SMART:SM00079	EnsemblPlantsGene:SORBI_3002G209200
SUPFAM:SSF53822	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI0003C6DC98	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:60110032..60117238

Molecular Weight (calculated)

108035.0 Da

IEP (calculated)

6.026

GRAVY (calculated)

-0.159

Length

970 amino acids

Sequence
(BLAST)

001: MQRRPLPNRA KESVYSSFRC PHESGSVSAL SFRRRLLAVL LLCLVVGAQQ GEGQAAGPAA GAAGARRRVD VGVILDRTTW LGNISWACME LALEDFYADA
101: SHANYSTRVT LHLRDTPAGP SAVDAASAGV DLLKNVRVQA IVGPQTSSQA KFLAELGNKA SVPIISFSAN SPSRSSSQTP YFIRTAWNDS CQAEAIASLV
201: HKYNWREVIP IIEDNDSNTR FIPDLIDALG HVDTRVQYRC KIHPSAGEAE IKHAISSLKV NWTSVFVVRM SYQLALKFFQ LAKDEGMMGQ GYVWITAYGL
301: TDIFNVVGYP ALDVMQGVVG IEPYVEETVR LNKFRQRWHE KYRLENPGTS INEPITSGLY AYDTVWAIAL AAEKGGYVNS DFVPSETNNG STDFDKISTS
401: RAAEKFRDAF LKVNFTGISG QFVIQDMQLV STTYKIINIA GRERRAVGFW TPGLNISRIS IVWPGGSETT PRGWLLPVNK KLKIGVPVKP GFSSFIRSED
501: GTPKGFCIDV FEEVIGKLPY KVPKHYVEFG NGKGESNGTY DELVYKVYLK EFDAVVGDIT ILANRSLYVD YTLPYTESGV RMLVPVRDQR QKTAWTFLEP
601: LTADLWLGTG AFIVFTGFIV WFIEHRTNQE FRGPPASQIG SVFYFSFSTL VFAHRERIVN NLSRIAVVLW LFVVLILQQS YTASLSSILT VEQLQPTVTN
701: IDEVIRRGDY VGYLNDSFMP ELLKRLKINE TKMKAFSSPE EYNDALSTRK VAVIVDEIPY LKVFLSKYCH KYTMVGPTYK FDGFGYAFPR GSPLTPEISR
801: GILELASNGR MDELEKQLYG DTSCPDKDDS QTSSSLTLHS FLGLFIITGT TSLLALILHV IISLYDHRSH WINGSGQISW HELLAVLFKI FHERDNSSNT
901: PDNEEPEMED IDPPTAESPW SMSNHIIENV DSDTDTGSTP DGEGTPGREV SNQDLGPPSF AYMHSEGAME

Best Arabidopsis Sequence Match ( AT2G29100.2 )
(BLAST)

001: MMMKTNNTFL SYFVCGFLLM GVGLGQNQTS EIKVGVVLDL NTTFSKICLT SIKMAVSDFY ADHPNYLTRL TLHVRDSMED TVQASAAALD LIKTEQVSAI
101: IGPINSMQAD FMIKLANKTQ VPTITFSATS PLLTSIKSPY FVRATIDDSS QVRAIASIFK FFRWRRVVAI YVDNEFGEGF MPFLFDALQD VEVKRSVIPP
201: EAIDDEIQKE LRKLMERQAR VFVVHMESSL ALRVFQIARD IGMMEEGYVW LMTNGMTHMM RHINNGRSLN TIEGVLGVRS HVPKSKELGD FRLRWKRTFE
301: KENPSMRDDL NVFALWAYDS ITALAKAVEK ANTKSLWYDN GSTLSKNRTD LGNVGVSLYG PSLQKAFSEV RFNGLAGEFK LIDGQLQSPK FEIINFVGNE
401: ERIIGFWTPR DGLMDATSSN KKTLGPVIWP GKSKIVPKGW EIPGKKLRVG VPMKKGFFDF VKVTINPITN KKTPTGYAIE IFEAALKELP YLVIPEYVSF
501: ESPNNYNNLV YQVYDKTWDA VVGDITITAN RSLYADFTLP FTESGVSMMV PVRDNENKDT WVFLEPWSLE LWVTTGCFFV FIGFVVWLFE HRVNTDFRGP
601: PQYQIGTSLW FSFSTMVFAH RENVVSNLAR FVVVVWCFVV LVLTQSYTAS LTSFLTVQSL QPTVTNVNDL IKNRDCVGYQ GGAFVKDILL GLGFHEDQLK
701: PFDSAKDADD LLSKGKSKGI AAAFDEVAYL KAILSQSCSK YVMVEPTFKT GGFGFAFPKN SPLTGEFSRA ILNLTQNNVT QQIEDRWFPK KNDCPDPMTA
801: LSSNRLNLSS FLGLFLIAGT AISFSLLVFV ALFLYEHRHT LGDDSEDSLW RKLKFLFKIF DEKDMNSHTF KNSAIHNISS PMTHKTPSPS TVQITPWPQS
901: PSQNREFELR RVSFSPSEER FTTQPIIHHE DGESDIECRV EQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.