Factsheet for GSMUA_Achr6P01870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	31.05	50.46
GSMUA_AchrUn_...	Banana	golgi	47.15	48.47
TraesCS5D01G225900.1	Wheat	golgi	47.49	48.04
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	51.83	47.79
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	53.31	47.56
TraesCS5A01G218000.1	Wheat	plasma membrane	53.2	47.55
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	53.08	47.55
KXG35672	Sorghum	mitochondrion, plasma membrane	52.63	47.53
Zm00001d005783_P002	Maize	plasma membrane	52.85	47.49
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	48.4	47.43
HORVU5Hr1G063440.1	Barley	plasma membrane	52.97	47.25
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	52.28	46.88
TraesCS5A01G218200.1	Wheat	plasma membrane	51.6	46.65
TraesCS5D01G226300.1	Wheat	plasma membrane	51.14	46.62
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	52.17	46.12
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	34.36	45.54
Zm00001d020568_P001	Maize	golgi	49.77	45.37
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	42.58	45.05
VIT_04s0069g00170.t01	Wine grape	plasma membrane	47.26	44.71
VIT_04s0069g00560.t01	Wine grape	plasma membrane	45.66	44.64
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	36.99	44.44
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	43.15	43.65
VIT_04s0069g00670.t01	Wine grape	plasma membrane	45.66	43.53
GSMUA_Achr4P02110_001	Banana	cytosol	39.95	43.32
GSMUA_Achr3P04970_001	Banana	plasma membrane	46.35	42.42
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	26.6	41.98
VIT_04s0069g00200.t01	Wine grape	cytosol	21.12	41.95
KRH50533	Soybean	plasma membrane	38.13	41.65
VIT_04s0069g00540.t01	Wine grape	plasma membrane	33.45	41.44
CDY31759	Canola	cytosol, peroxisome, plasma membrane	22.26	41.4
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.97	41.32
VIT_04s0069g00060.t01	Wine grape	plasma membrane	46.12	41.27
GSMUA_Achr9P13570_001	Banana	plasma membrane	42.92	41.23
CDY31756	Canola	cytosol, peroxisome, plastid	40.64	41.01
CDY70035	Canola	cytosol, plasma membrane	37.79	40.91
VIT_04s0069g00380.t01	Wine grape	cytosol	19.06	40.73
KRH50532	Soybean	plasma membrane	37.56	40.72
VIT_04s0069g00720.t01	Wine grape	cytosol	27.63	40.54
CDY58212	Canola	cytosol, plasma membrane	38.58	40.53
VIT_04s0069g00620.t01	Wine grape	plasma membrane	45.66	40.4
Bra040760.1-P	Field mustard	cytosol	38.36	39.91
CDY31755	Canola	cytosol	42.01	39.87
Solyc08g006500.2.1	Tomato	extracellular	44.18	39.86
AT2G29110.2	Thale cress	plasma membrane	42.92	39.66
Bra040761.1-P	Field mustard	cytosol	42.12	39.63
AT2G29100.2	Thale cress	plasma membrane	42.47	39.49
VIT_04s0069g00230.t01	Wine grape	plasma membrane	45.89	39.3
CDY51113	Canola	plasma membrane	38.47	39.23
Bra023313.1-P	Field mustard	plasma membrane	38.24	39.0
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.55	38.97
CDX85724	Canola	plasma membrane	38.13	38.88
AT2G29120.1	Thale cress	plasma membrane	42.01	38.66
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	42.47	38.51
AT5G27100.1	Thale cress	plasma membrane	39.38	38.29
CDX72325	Canola	plasma membrane	28.88	37.54
CDY00544	Canola	plasma membrane	33.22	37.36
CDY50141	Canola	plasma membrane	22.49	37.17
CDY38574	Canola	plasma membrane	40.87	37.02
Bra032072.1-P	Field mustard	plasma membrane	37.79	36.94
CDX73196	Canola	cytosol, peroxisome, plasma membrane	38.36	36.8
CDY36173	Canola	plasma membrane	33.68	36.6
AT4G31710.2	Thale cress	plasma membrane	38.01	36.51
CDY39533	Canola	plasma membrane	40.41	36.46
AT2G24720.1	Thale cress	plasma membrane	38.13	36.3
PGSC0003DMT400023744	Potato	cytosol	36.19	36.27
Bra032063.1-P	Field mustard	plasma membrane	37.9	35.97
AT5G11210.5	Thale cress	plasma membrane	37.56	35.84
CDY54213	Canola	plasma membrane	36.3	35.77
CDY45595	Canola	plasma membrane	34.59	35.23
AT2G24710.3	Thale cress	plasma membrane	36.76	35.04
AT5G11180.2	Thale cress	plasma membrane	38.47	34.85
CDY56837	Canola	plasma membrane	36.42	34.75
CDY68132	Canola	plasma membrane	39.16	33.99
Bra015817.1-P	Field mustard	plasma membrane	39.16	33.99
CDY13449	Canola	cytosol	36.07	32.95
GSMUA_Achr9P11690_001	Banana	plasma membrane	32.99	32.36
GSMUA_Achr9P23900_001	Banana	plasma membrane	33.68	32.14
GSMUA_Achr9P30180_001	Banana	mitochondrion, plasma membrane	32.76	31.92
GSMUA_Achr5P00740_001	Banana	plasma membrane	31.05	31.66
GSMUA_Achr6P00460_001	Banana	plasma membrane	33.33	31.57
GSMUA_Achr9P02750_001	Banana	plasma membrane	32.99	31.52
Bra023989.1-P	Field mustard	cytosol	35.39	31.47
GSMUA_Achr3P27050_001	Banana	plasma membrane	32.76	31.37
GSMUA_Achr5P19180_001	Banana	plasma membrane	31.85	31.0
CDY63640	Canola	cytosol	18.26	29.47
GSMUA_Achr2P15450_001	Banana	plasma membrane	26.6	29.31
GSMUA_Achr4P30920_001	Banana	plasma membrane	26.26	29.26
VIT_04s0069g00330.t01	Wine grape	plastid	45.55	22.67
GSMUA_Achr5P00750_001	Banana	mitochondrion	33.1	15.49

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:GPCR_3	EnsemblPlantsGene:GSMUA_Achr6G01870_001
EnsemblPlants:GSMUA_Achr6P01870_001	EnsemblPlants:GSMUA_Achr6T01870_001	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	UniProt:M0T3D5	PFAM:PF00060
PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PANTHER:PTHR43891	PANTHER:PTHR43891:SF6
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI000295A2F6	SEG:seg	:	:	:	:

Description

Putative Glutamate receptor 2.7 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01870_001]

Coordinates

chr6:+:1218002..1221721

Molecular Weight (calculated)

97345.5 Da

IEP (calculated)

6.219

GRAVY (calculated)

-0.132

Length

876 amino acids

Sequence
(BLAST)

001: MIMAVEDFYK ANPDYTTRLS LHWRDTDNSS ISAASAALDL LKNVRVQAII GPQTSTQAKF VAILGDKAQV PIISFSATSP TTSSSQNPYF IRTAWNDSSQ
101: AQAIASLVEA FGWREVVPVY EDSEYGASIV PHLIDALQEV GANVPNRSMI PLSATADRRL VLAELQKLNQ SRTRVFVVHM SYSLAFRLFS TAQEAGMMGE
201: GYVWITTYGL TDLVDLQGPA AARIMRGALG IRPYVRNTTK HQVFKARWRR RYHQESVNDN VTEPTVYGLW AYDTVWSLAM AAEAVRASSS SPFTWSNLIL
301: NTTLVDGMSG RFEIVEDGQV LQSRAFEILN VADDGWRRVG FWTPTHGASR HMNKATALRV VEWPGGGTKP PKGWEWPTAG NKLIVGVPVK PGFPQFVTAN
401: NSVPDGYCIK VFEAVLSQLP YHVPIQYEIY KDNHGESNGT YDDLVYQVFL QKYDAVVGDV TIRANRSLYV DFTLPFTVSG VSMVVPIRDE RRKDAWTFMN
501: PLTPNLWFAS GAAFVFTGLV VWFLEHRINV NFNPGRASNQ IGTVFYFSFS TLVFAHQEKV LSNLARVVVV IWLFVVLILQ SSYTASLTSM LTVQQLQPTV
601: SDVDQLVRDG SKVGYLKDSF MPGLLKRLKF NESQLIAYES PQEYHDALLN GSVAAIVDEI PYLKVFLSKY CDKFTMVGTI DKTSGLGFAF PKGSPLVPDV
701: SRAILNVTET NKTKDLENML YGNTSCPDKD PDMTSSRLTF NSFWGLFLIS GATSFSALIL HLVFFLYEHR HGLQDGRWRS ILGWLATLAK LYSQTDSCAD
801: APEKAKPQDG TATGDIPSSP YLDSGWQTPS SISNHANGYL GSEDDTGTPP EEEETPGREI SEQTQGSPSF AEMLRR

Best Arabidopsis Sequence Match ( AT2G29120.1 )
(BLAST)

001: MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK
101: NEQVSAIIGP RTSMQAEFMI RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD NEFGEGILPL LTDALQDVQA
201: FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN
301: FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD
401: VINIIGSEER IIGLWRPSNG IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI DPISNAMTPT GYCIEIFEAV
501: LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV
601: WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR
701: ELLKSQGFDE SQLKPFGSAV ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR AILNVTQGEE MQHIENKWFK
801: KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP
901: LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE

Arabidopsis Description

GLR2.7Glutamate receptor 2.7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.