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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G218200.1 Wheat plasma membrane 88.74 89.47
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 89.87 88.6
TraesCS5D01G226300.1 Wheat plasma membrane 87.0 88.45
HORVU5Hr1G063440.1 Barley plasma membrane 77.79 77.39
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 39.3 71.24
KXG35672 Sorghum mitochondrion, plasma membrane 68.78 69.28
Zm00001d005783_P002 Maize plasma membrane 68.68 68.82
Os09t0431200-01 Rice endoplasmic reticulum, extracellular 66.02 67.89
Zm00001d020568_P001 Maize golgi 65.2 66.29
GSMUA_Achr6P01870_001 Banana cytosol 46.88 52.28
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 26.0 45.77
VIT_04s0069g00560.t01 Wine grape plasma membrane 41.97 45.76
VIT_04s0069g00200.t01 Wine grape cytosol 20.16 44.67
VIT_04s0069g00540.t01 Wine grape plasma membrane 32.24 44.55
VIT_04s0069g00670.t01 Wine grape plasma membrane 41.66 44.29
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 37.46 44.2
VIT_04s0069g00380.t01 Wine grape cytosol 18.53 44.15
VIT_04s0069g00170.t01 Wine grape plasma membrane 41.56 43.84
VIT_04s0069g00720.t01 Wine grape cytosol 26.2 42.88
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 37.97 42.84
KRH50533 Soybean plasma membrane 34.8 42.39
VIT_04s0069g00620.t01 Wine grape plasma membrane 42.58 42.02
VIT_04s0069g00060.t01 Wine grape plasma membrane 41.56 41.47
HORVU5Hr1G063490.1 Barley golgi, vacuole 17.71 40.71
VIT_04s0069g00230.t01 Wine grape plasma membrane 42.48 40.57
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 24.36 40.13
CDY31759 Canola cytosol, peroxisome, plasma membrane 19.14 39.7
CDY31756 Canola cytosol, peroxisome, plastid 34.8 39.17
Solyc08g006500.2.1 Tomato extracellular 38.89 39.13
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 37.26 38.97
AT2G29110.2 Thale cress plasma membrane 37.77 38.92
CDY50141 Canola plasma membrane 21.09 38.87
KRH50532 Soybean plasma membrane 32.14 38.86
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 19.86 38.8
HORVU6Hr1G083680.5 Barley plasma membrane 40.23 38.8
HORVU5Hr1G072170.1 Barley plasma membrane 31.63 38.72
CDY70035 Canola cytosol, plasma membrane 32.04 38.69
AT2G29100.2 Thale cress plasma membrane 37.15 38.53
Bra040760.1-P Field mustard cytosol 33.16 38.48
HORVU6Hr1G083570.16 Barley plasma membrane 39.92 38.31
HORVU5Hr1G063500.1 Barley plasma membrane 36.03 37.89
Bra023313.1-P Field mustard plasma membrane 33.27 37.83
CDY31755 Canola cytosol 35.62 37.7
CDY58212 Canola cytosol, plasma membrane 32.14 37.65
CDY51113 Canola plasma membrane 33.06 37.6
CDX85724 Canola plasma membrane 33.06 37.6
Bra040761.1-P Field mustard cytosol 35.62 37.38
AT2G29120.1 Thale cress plasma membrane 36.34 37.29
HORVU5Hr1G010420.17 Barley plasma membrane 34.19 37.11
CDY38574 Canola plasma membrane 36.64 37.02
HORVU7Hr1G031400.1 Barley plasma membrane 27.43 36.91
HORVU7Hr1G081410.3 Barley plasma membrane 21.6 36.89
CDY39533 Canola plasma membrane 36.64 36.87
HORVU5Hr1G063540.6 Barley plasma membrane 34.29 36.73
HORVU5Hr1G063530.5 Barley plasma membrane 34.39 36.64
Bra032072.1-P Field mustard plasma membrane 33.47 36.5
AT4G31710.2 Thale cress plasma membrane 33.67 36.07
AT5G27100.1 Thale cress plasma membrane 33.27 36.07
AT2G24720.1 Thale cress plasma membrane 33.57 35.65
AT5G11210.5 Thale cress plasma membrane 33.47 35.62
CDY54213 Canola plasma membrane 32.34 35.55
Bra032063.1-P Field mustard plasma membrane 33.57 35.54
CDY00544 Canola plasma membrane 28.05 35.17
CDX73196 Canola cytosol, peroxisome, plasma membrane 32.86 35.16
PGSC0003DMT400023744 Potato cytosol 31.32 35.01
CDX72325 Canola plasma membrane 24.05 34.87
AT2G24710.3 Thale cress plasma membrane 32.45 34.49
CDY45595 Canola plasma membrane 30.3 34.42
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 35.62 34.29
AT5G11180.2 Thale cress plasma membrane 33.88 34.23
CDY36173 Canola plasma membrane 27.84 33.75
HORVU5Hr1G063430.8 Barley plasma membrane 31.83 33.12
CDY56837 Canola plasma membrane 31.01 33.01
CDY68132 Canola plasma membrane 33.57 32.51
Bra015817.1-P Field mustard plasma membrane 33.57 32.51
HORVU2Hr1G045730.6 Barley plasma membrane 30.4 32.07
HORVU6Hr1G009520.1 Barley plasma membrane 30.09 31.75
HORVU0Hr1G018770.1 Barley plasma membrane 25.69 31.26
HORVU1Hr1G086120.3 Barley plasma membrane 29.58 30.98
HORVU0Hr1G036590.3 Barley plasma membrane 29.38 30.76
HORVU2Hr1G049510.4 Barley plasma membrane 29.38 30.76
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 29.17 30.48
CDY13449 Canola cytosol 29.48 30.03
HORVU2Hr1G104920.3 Barley plasma membrane 29.07 29.89
Bra023989.1-P Field mustard cytosol 29.07 28.83
CDY63640 Canola cytosol 15.15 27.26
VIT_04s0069g00330.t01 Wine grape plastid 42.07 23.35
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:HORVU5Hr1G063480EnsemblPlants:HORVU5Hr1G063480.2InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
UniProt:M0W6J7PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PANTHER:PTHR43891
PANTHER:PTHR43891:SF6InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI000294D6BBSEG:seg::
Description
Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:M0W6J7]
Coordinates
chrchr5H:-:492674639..492680132
Molecular Weight (calculated)
108686.0 Da
IEP (calculated)
7.243
GRAVY (calculated)
-0.115
Length
977 amino acids
Sequence
(BLAST)
001: MTLLRLAMAV LGRHALLLAL VLLFGASSVA ARRGGVAPPR RRQQAVDVGV ILDRSTWVGN TSWTCIELAL EDFYADASHA GYRTRLKLHL RDTGPGAVEA
101: ASAGIDLLKN VRVQAIVGPQ SSTQAKFLAE LGNKSSVPII SFSANSPSRS GQTPYFIRTA WNDSSQAEAI AALVQKHSWR EVIPVFEDDN SNTRFIPDLV
201: DALRQVDTHV SYRCKIHPSA TEDDIKSAIS TLKHNWTSVF VVRMSHTLAR KFFKLAKYEG MMGRGFVWII AYGLTDIFDV AGSPALDVMQ GVLGVKPHVE
301: HTMELQNLSQ RWRKKYQLEN PGIAVSMPAV YGLYAYDTIW ALALAAEKAG YVNSDFGVSV TNNGSTDFDR IDTSKAAEKL RGSLLGIKFM GMSGNFCIAD
401: MQLVSVNYKI INIIGRERRV VGFWTPGSGI SGSLNVKADL GTIVWPGYNE TVPGYTETVP RGWLLPMNKI LEIGVPVKPG FDEFVKFENG KPKGFCIDVF
501: EAVVNTLSYN VPCHYKPFAD EKGNSKGTYD DLVYSVYRKE YDVVVGDITI LANRSLYVDF TLPYTESGVR MLVPVRDQRQ KTAWTFLNPL TADLWLGFGA
601: FFVFTGFVVW CIEHRTNKDF RGPPGSQIGS IFYFSFSTLV FAHREKILNN LSRIAVVVWL FVVLILQQSY TASLSSILTV EQLQPTITNL EEVIRNGSYV
701: GYLNDSFLPV LLKRLKIDES KMIPLDSPEH YNEALTSGKV AVIVDEIPYL KVFLKQYCHN YTMVGPTYKL DGFGYAFPRG SPLTPDISRE ILKFASDDRM
801: IKMQKELYGD TSCLDKDDSQ TSSSLALHSF QGLFIITGAS SMLALLLHAV VTIYNNRHEF NSDSSQSSWR RWPAILSKLF HGDDNPCNTP DKDEPTPENV
901: DDAMESQLSI PNHIIEHLAD RDTGSPPEGE GTPGRELSVQ GKEPLSFAYM HSERGHNGVA SLTRNGSSIR RRQISME
Best Arabidopsis Sequence Match ( AT2G29100.2 )
(BLAST)
001: MMMKTNNTFL SYFVCGFLLM GVGLGQNQTS EIKVGVVLDL NTTFSKICLT SIKMAVSDFY ADHPNYLTRL TLHVRDSMED TVQASAAALD LIKTEQVSAI
101: IGPINSMQAD FMIKLANKTQ VPTITFSATS PLLTSIKSPY FVRATIDDSS QVRAIASIFK FFRWRRVVAI YVDNEFGEGF MPFLFDALQD VEVKRSVIPP
201: EAIDDEIQKE LRKLMERQAR VFVVHMESSL ALRVFQIARD IGMMEEGYVW LMTNGMTHMM RHINNGRSLN TIEGVLGVRS HVPKSKELGD FRLRWKRTFE
301: KENPSMRDDL NVFALWAYDS ITALAKAVEK ANTKSLWYDN GSTLSKNRTD LGNVGVSLYG PSLQKAFSEV RFNGLAGEFK LIDGQLQSPK FEIINFVGNE
401: ERIIGFWTPR DGLMDATSSN KKTLGPVIWP GKSKIVPKGW EIPGKKLRVG VPMKKGFFDF VKVTINPITN KKTPTGYAIE IFEAALKELP YLVIPEYVSF
501: ESPNNYNNLV YQVYDKTWDA VVGDITITAN RSLYADFTLP FTESGVSMMV PVRDNENKDT WVFLEPWSLE LWVTTGCFFV FIGFVVWLFE HRVNTDFRGP
601: PQYQIGTSLW FSFSTMVFAH RENVVSNLAR FVVVVWCFVV LVLTQSYTAS LTSFLTVQSL QPTVTNVNDL IKNRDCVGYQ GGAFVKDILL GLGFHEDQLK
701: PFDSAKDADD LLSKGKSKGI AAAFDEVAYL KAILSQSCSK YVMVEPTFKT GGFGFAFPKN SPLTGEFSRA ILNLTQNNVT QQIEDRWFPK KNDCPDPMTA
801: LSSNRLNLSS FLGLFLIAGT AISFSLLVFV ALFLYEHRHT LGDDSEDSLW RKLKFLFKIF DEKDMNSHTF KNSAIHNISS PMTHKTPSPS TVQITPWPQS
901: PSQNREFELR RVSFSPSEER FTTQPIIHHE DGESDIECRV EQ
Arabidopsis Description
ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.