Factsheet for HORVU5Hr1G010420.17

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
TargetP:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G042800.1	Wheat	plasma membrane	89.22	89.42
TraesCS5B01G046400.1	Wheat	plasma membrane	88.33	88.53
TraesCS5D01G051300.1	Wheat	golgi	88.0	88.1
HORVU5Hr1G072170.1	Barley	plasma membrane	67.56	76.19
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	42.22	76.0
HORVU5Hr1G063540.6	Barley	plasma membrane	73.0	72.04
EER98936	Sorghum	plasma membrane	66.33	63.11
OQU89534	Sorghum	plasma membrane	63.33	62.57
HORVU5Hr1G063530.5	Barley	plasma membrane	53.44	52.45
HORVU5Hr1G063500.1	Barley	plasma membrane	54.0	52.31
HORVU7Hr1G081410.3	Barley	plasma membrane	29.89	47.03
VIT_04s0069g00200.t01	Wine grape	cytosol	22.78	46.49
GSMUA_Achr3P04970_001	Banana	plasma membrane	48.56	45.66
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	27.78	45.05
VIT_04s0069g00380.t01	Wine grape	cytosol	20.11	44.15
GSMUA_Achr9P13570_001	Banana	plasma membrane	43.56	42.98
VIT_04s0069g00720.t01	Wine grape	cytosol	27.89	42.04
VIT_04s0069g00560.t01	Wine grape	plasma membrane	41.67	41.85
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	38.11	41.43
VIT_04s0069g00170.t01	Wine grape	plasma membrane	41.67	40.5
VIT_04s0069g00540.t01	Wine grape	plasma membrane	31.56	40.17
VIT_04s0069g00670.t01	Wine grape	plasma membrane	40.89	40.04
VIT_04s0069g00620.t01	Wine grape	plasma membrane	43.11	39.19
KRH50533	Soybean	plasma membrane	34.22	38.4
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	36.78	38.22
VIT_04s0069g00060.t01	Wine grape	plasma membrane	41.56	38.2
Bra032072.1-P	Field mustard	plasma membrane	38.0	38.17
AT2G29110.2	Thale cress	plasma membrane	40.0	37.97
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.33	37.9
KRH50532	Soybean	plasma membrane	34.0	37.87
AT2G29100.2	Thale cress	plasma membrane	39.56	37.79
Solyc08g006500.2.1	Tomato	extracellular	40.56	37.59
CDY51113	Canola	plasma membrane	35.67	37.37
Bra023313.1-P	Field mustard	plasma membrane	35.44	37.14
Bra040760.1-P	Field mustard	cytosol	34.44	36.82
CDX85724	Canola	plasma membrane	35.11	36.79
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.11	36.59
AT5G27100.1	Thale cress	plasma membrane	36.56	36.52
AT2G29120.1	Thale cress	plasma membrane	38.56	36.45
AT2G24720.1	Thale cress	plasma membrane	37.22	36.41
CDY31756	Canola	cytosol, peroxisome, plastid	35.11	36.41
CDY54213	Canola	plasma membrane	35.78	36.22
CDY31755	Canola	cytosol	37.11	36.19
CDY00544	Canola	plasma membrane	31.22	36.07
VIT_04s0069g00230.t01	Wine grape	plasma membrane	41.0	36.07
CDY38574	Canola	plasma membrane	38.67	35.99
Bra040761.1-P	Field mustard	cytosol	37.11	35.88
CDY70035	Canola	cytosol, plasma membrane	32.22	35.85
Bra032063.1-P	Field mustard	plasma membrane	36.44	35.54
CDY39533	Canola	plasma membrane	38.22	35.43
AT2G24710.3	Thale cress	plasma membrane	36.11	35.36
CDX72325	Canola	plasma membrane	26.33	35.16
CDY58212	Canola	cytosol, plasma membrane	32.44	35.01
CDY36173	Canola	plasma membrane	31.22	34.86
PGSC0003DMT400023744	Potato	cytosol	33.78	34.78
HORVU5Hr1G063440.1	Barley	plasma membrane	37.89	34.73
AT5G11210.5	Thale cress	plasma membrane	35.33	34.64
CDY45595	Canola	plasma membrane	32.89	34.42
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	37.11	34.19
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	20.33	33.95
CDX73196	Canola	cytosol, peroxisome, plasma membrane	34.33	33.84
AT4G31710.2	Thale cress	plasma membrane	34.0	33.55
AT5G11180.2	Thale cress	plasma membrane	36.0	33.51
CDY56837	Canola	plasma membrane	34.0	33.33
CDY31759	Canola	cytosol, peroxisome, plasma membrane	17.33	33.12
HORVU6Hr1G083680.5	Barley	plasma membrane	36.89	32.77
HORVU7Hr1G031400.1	Barley	plasma membrane	26.11	32.37
HORVU6Hr1G083570.16	Barley	plasma membrane	36.33	32.12
CDY63640	Canola	cytosol	19.33	32.04
CDY68132	Canola	plasma membrane	35.56	31.71
Bra015817.1-P	Field mustard	plasma membrane	35.56	31.71
HORVU5Hr1G063430.8	Barley	plasma membrane	32.67	31.31
CDY13449	Canola	cytosol	32.78	30.76
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	34.44	30.54
Bra023989.1-P	Field mustard	cytosol	33.11	30.25
CDY50141	Canola	plasma membrane	17.78	30.19
HORVU2Hr1G045730.6	Barley	plasma membrane	30.67	29.81
HORVU0Hr1G018770.1	Barley	plasma membrane	26.0	29.14
HORVU1Hr1G086120.3	Barley	plasma membrane	29.89	28.83
HORVU2Hr1G049510.4	Barley	plasma membrane	29.67	28.62
HORVU0Hr1G036590.3	Barley	plasma membrane	29.67	28.62
HORVU5Hr1G063490.1	Barley	golgi, vacuole	13.44	28.47
HORVU6Hr1G009520.1	Barley	plasma membrane	29.22	28.4
HORVU7Hr1G104490.2	Barley	golgi, plasma membrane	29.33	28.24
HORVU2Hr1G104920.3	Barley	plasma membrane	29.11	27.58
VIT_04s0069g00330.t01	Wine grape	plastid	41.0	20.97

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	UniProt:A0A287QC75	InterPro:ANF_lig-bd_rcpt
GO:GO:0003674	GO:GO:0004871	GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:GPCR_3
EnsemblPlantsGene:HORVU5Hr1G010420	EnsemblPlants:HORVU5Hr1G010420.17	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PANTHER:PTHR43891	PANTHER:PTHR43891:SF19	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI000B4662FC	SEG:seg	:	:	:	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A287QC75]

Coordinates

chrchr5H:-:25825485..25840018

Molecular Weight (calculated)

100593.0 Da

IEP (calculated)

8.743

GRAVY (calculated)

-0.056

Length

900 amino acids

Sequence
(BLAST)

001: ERAIVLFFLL LAATVDFGVA GDATGDGKLA DGFHVGVILD LGSPVGKVAR TSVLLAVQDF YAAHRNYITK LVLHVRDSMG SDVKAASAAI ELLENYRVQA
101: IIGPQKSSEA VFISNLGNIT QVPIISFTAT SPSLTSDSMP YFVRATPDDS AQVNSIASLV QAYGWREVVV VYDNTDYGRG IVLYLTDALQ KVDVRVPYRS
201: VIPSSATNET IIKKLNELMA MQTRVFIVHM SSTMTSLLFT KAKEVGMMNK GFVWITTSGV ANIMDTLNPG VIEAMNGVLG VRYHVPRSQK LDNLSKRWNR
301: MYLQDNPDDS PSNKLSIVGL RGYDTIWALA QAAEKVGISN ATNKPPLFIK NSTCLEPMVI STKGPQLLKT IVQNKFRGFS GEFDLTDRQQ LKASVFQIIN
401: VVGRGWREIG FWTVKGGLSK QLKQDGFKKT GPDSMHDLNP VIWPGESTKT PMGWEIPTVG KKLKVGVRSS KIPEFINSYK DPVKNATTMS GLTIDIFEEA
501: IKRLPFPLSY EYLEFDTDTG SYNDFVYHVY LQEYDIAVAD ITIRYNRSLY VDFTVPYTES GVGMIVPVKE NVMKDMWLFL KPLSTELWFG SILLFMYTGV
601: VVWLLEYLNG NEHVHGHISL KQLATTVFSI FEEKENLERF LPRIVLRVWM VVLLVLAASY TASFASMLTV HQLSPTVTDV HELQKNGEYV GFHQGSYIEG
701: LLVEIGFDTS KLRAYATVED FYGALSNGSI AAVVLDVPYI KLFLAKYRKG YAMVGPIYKS AGFAFALPKN SPLRAEMSRA ILNITGGDTI IQLEKKWIDQ
801: NSHENDGTLD GSGAITFECF GGLFLLTGVV TTCSPFVAML MNRYKKLQQD VRNNKGDDQN ECRHKQVKKK RKWKNKEMKM ETELREPNNF VSASQFEQKW

Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)

001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL

Arabidopsis Description

GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.