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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G063540.6 Barley plasma membrane 68.61 68.53
EER98936 Sorghum plasma membrane 71.02 68.39
TraesCS5B01G217700.1 Wheat plasma membrane 67.84 67.69
HORVU5Hr1G072170.1 Barley plasma membrane 58.95 67.29
TraesCS5A01G218600.1 Wheat plasma membrane 67.29 67.14
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 46.76 67.09
TraesCS5D01G226600.1 Wheat plasma membrane 68.28 66.95
TraesCS5D01G266800.1 Wheat plasma membrane 64.54 65.77
TraesCS5B01G257800.1 Wheat plasma membrane 64.87 65.45
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 35.78 65.2
TraesCS5B01G046400.1 Wheat plasma membrane 63.12 64.03
TraesCS5A01G042800.1 Wheat plasma membrane 63.01 63.92
HORVU5Hr1G010420.17 Barley plasma membrane 62.57 63.33
TraesCS5D01G051300.1 Wheat golgi 62.24 63.07
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 47.75 59.67
EER98937 Sorghum plasma membrane 54.77 52.8
OQU84757 Sorghum plasma membrane 51.92 51.92
OQU89536 Sorghum cytosol 50.49 50.88
OQU89527 Sorghum plasma membrane 50.6 49.57
VIT_04s0069g00200.t01 Wine grape cytosol 22.72 46.94
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 28.1 46.13
VIT_04s0069g00380.t01 Wine grape cytosol 20.75 46.1
GSMUA_Achr3P04970_001 Banana plasma membrane 47.42 45.14
VIT_04s0069g00720.t01 Wine grape cytosol 27.66 42.21
GSMUA_Achr9P13570_001 Banana plasma membrane 42.15 42.11
VIT_04s0069g00560.t01 Wine grape plasma membrane 40.72 41.41
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 37.21 40.94
VIT_04s0069g00540.t01 Wine grape plasma membrane 31.28 40.31
VIT_04s0069g00170.t01 Wine grape plasma membrane 40.5 39.85
VIT_04s0069g00670.t01 Wine grape plasma membrane 39.74 39.39
VIT_04s0069g00620.t01 Wine grape plasma membrane 41.6 38.28
KRH50533 Soybean plasma membrane 33.37 37.91
VIT_04s0069g00060.t01 Wine grape plasma membrane 40.5 37.69
KRH50532 Soybean plasma membrane 33.26 37.5
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 35.57 37.41
Bra032072.1-P Field mustard plasma membrane 36.33 36.94
AT2G29110.2 Thale cress plasma membrane 38.31 36.81
Bra032063.1-P Field mustard plasma membrane 36.99 36.51
Solyc08g006500.2.1 Tomato extracellular 38.53 36.15
VIT_04s0069g00230.t01 Wine grape plasma membrane 40.5 36.07
AT2G29100.2 Thale cress plasma membrane 37.21 35.99
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 36.88 35.97
AT2G29120.1 Thale cress plasma membrane 37.54 35.92
AT2G24720.1 Thale cress plasma membrane 35.89 35.54
CDY51113 Canola plasma membrane 33.48 35.51
CDY45595 Canola plasma membrane 33.48 35.47
Bra040760.1-P Field mustard cytosol 32.71 35.39
CDY54213 Canola plasma membrane 34.47 35.32
Bra023313.1-P Field mustard plasma membrane 33.26 35.27
CDY36173 Canola plasma membrane 30.95 34.99
CDX85724 Canola plasma membrane 32.93 34.92
KXG35670 Sorghum plasma membrane 37.43 34.9
AT2G24710.3 Thale cress plasma membrane 35.02 34.71
CDY31756 Canola cytosol, peroxisome, plastid 33.04 34.68
PGSC0003DMT400023744 Potato cytosol 33.26 34.67
AT5G27100.1 Thale cress plasma membrane 34.25 34.63
KXG19504 Sorghum golgi, plasma membrane, vacuole 33.04 34.56
CDY38574 Canola plasma membrane 36.33 34.23
CDY00544 Canola plasma membrane 29.2 34.15
AT5G11210.5 Thale cress plasma membrane 34.36 34.1
CDY39533 Canola plasma membrane 36.33 34.09
CDY31755 Canola cytosol 34.36 33.91
CDY70035 Canola cytosol, plasma membrane 29.97 33.75
KXG35672 Sorghum mitochondrion, plasma membrane 35.89 33.71
AT4G31710.2 Thale cress plasma membrane 33.7 33.66
Bra040761.1-P Field mustard cytosol 34.36 33.62
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 21.41 32.88
CDX73196 Canola cytosol, peroxisome, plasma membrane 32.82 32.75
AT5G11180.2 Thale cress plasma membrane 34.69 32.68
KXG35671 Sorghum plasma membrane 35.02 32.55
CDX72325 Canola plasma membrane 24.04 32.49
CDY56837 Canola plasma membrane 32.6 32.35
KXG31244 Sorghum mitochondrion 35.68 32.11
CDY58212 Canola cytosol, plasma membrane 28.98 31.65
CDY63640 Canola cytosol 18.55 31.12
Bra015817.1-P Field mustard plasma membrane 33.59 30.33
CDY68132 Canola plasma membrane 33.59 30.33
EER90229 Sorghum plasma membrane 30.19 29.7
EER97313 Sorghum plasma membrane 29.53 29.11
CDY13449 Canola cytosol 30.63 29.09
CDY50141 Canola plasma membrane 16.9 29.06
CDY31759 Canola cytosol, peroxisome, plasma membrane 14.93 28.87
Bra023989.1-P Field mustard cytosol 31.17 28.83
KXG26996 Sorghum plasma membrane 29.53 28.77
KXG20640 Sorghum plasma membrane 29.31 28.71
KXG29299 Sorghum plasma membrane 28.98 28.51
OQU84212 Sorghum mitochondrion 28.32 28.38
KXG20638 Sorghum plasma membrane 29.64 28.12
EER95721 Sorghum plastid 29.86 27.73
EER95720 Sorghum plastid 29.31 27.44
VIT_04s0069g00330.t01 Wine grape plastid 40.4 20.91
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1W0W543InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:OQU89534
ProteinID:OQU89534ProteinID:OQU89534.1PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF11InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G208800SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0009DC8305SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:60050494..60059583
Molecular Weight (calculated)
101382.0 Da
IEP (calculated)
7.004
GRAVY (calculated)
0.054
Length
911 amino acids
Sequence
(BLAST)
001: MEKIPQTILF LLLLVFTFVA AENSTAHRSG GADEFHVGVI LDLGSLVGKI SLASISLAVE DFYSVHPNHS TKLAIHIRDS MGSEVQAVSA AIDLRENYKV
101: QALIGPQKSS EATFISKLAS VIQVPVISFT ATSPSLTYDS SPYFVRATLN DSVQVNSIAS LVKAYGWREV VLLYDDTDYG RGILPHLIDA LQHSDIYVPY
201: RSGISLSATS EEIKQELYKL MAMQTRVFIV HMSSTRASLI FTMAKDAGMM SKGFVWIITN GLANIIDLLN PSVIEAMNGV IGIRFHVPKS QKLDTSFLIR
301: WNKIYQRYNP NKLPLNKSIT IVGLWAYDTV WALAQAAEKV GLSGNRNKRL QPHKNSTCLD SLAISINGAE LLTEIVQNKF QGVSGTFDLT ERQLQVSTLQ
401: IINVIGGTWR HIGFWTSKNG LSRHLNQNEL EITGSSASMP NLNLVSWPGE SIEIPRGWEF PTSGKKLRVG VTSSAYPEFI STSKDPVTNA TRVSGLSIDI
501: FENALKRLPF ALSYEYQAFD IAGDSTSSRS YDDFIYQVYL QRYDIAVADI TIIYNRSLYV DFTIPYTESG VGMIVPVKEK VNSNMWIFLK PLSQGMWFKS
601: IIFIIYTRIA ICLLEYLSGN RYLHGSFSLK QLGIQILKFF FIFEEKDMLE YFLSRVVHRV WKIVLLVLAS SYTASLASIL TVQQLSPTLT DIHELQKQGG
701: YVGFHQGSYM EGLLVDIGFD RSKMRPYHTP DDFHVALSNG VENGGVDALV LDVPYIKLFL AKYCKRYTMV GPIYKSAGFA FALPKRSPLL AELSKAIINI
801: TGGDTIIQIE KKWIDQNSCQ HDEEMDGSGA ITFGGFRGLF LLTGFVTACS ILVAFLMCHY KRQEESGHIQ DADKGNKENG DCNDDIDNRA TISVSGSPNT
901: NSICHDPIMT C
Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)
001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL
Arabidopsis Description
GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.