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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040760.1-P Field mustard cytosol 89.17 91.92
CDY70035 Canola cytosol, plasma membrane 82.03 88.01
CDY58212 Canola cytosol, plasma membrane 76.27 79.38
CDY31755 Canola cytosol 82.03 77.14
CDY31759 Canola cytosol, peroxisome, plasma membrane 41.47 76.43
CDY50141 Canola plasma membrane 46.66 76.42
CDY39533 Canola plasma membrane 72.58 64.88
CDY38574 Canola plasma membrane 71.89 64.53
AT2G29110.2 Thale cress plasma membrane 68.66 62.87
AT2G29100.2 Thale cress plasma membrane 66.47 61.25
VIT_04s0069g00560.t01 Wine grape plasma membrane 48.16 46.65
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 43.66 45.77
VIT_04s0069g00170.t01 Wine grape plasma membrane 48.5 45.46
VIT_04s0069g00670.t01 Wine grape plasma membrane 47.93 45.27
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 44.93 45.03
PGSC0003DMT400067658 Potato plastid 43.2 43.96
VIT_04s0069g00200.t01 Wine grape cytosol 22.23 43.76
VIT_04s0069g00380.t01 Wine grape cytosol 20.62 43.66
GSMUA_Achr6P26740_001 Banana cytosol, plasma membrane, plastid 32.95 43.27
GSMUA_Achr7P16350_001 Banana cytosol, peroxisome, plasma membrane 36.29 43.21
VIT_04s0069g00620.t01 Wine grape plasma membrane 49.08 43.03
VIT_04s0069g00060.t01 Wine grape plasma membrane 48.39 42.9
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 27.3 42.7
VIT_04s0069g00540.t01 Wine grape plasma membrane 34.45 42.29
CDY00544 Canola plasma membrane 37.9 42.23
VIT_04s0069g00230.t01 Wine grape plasma membrane 49.31 41.84
Solyc08g006500.2.1 Tomato extracellular 46.2 41.3
VIT_04s0069g00720.t01 Wine grape cytosol 28.0 40.7
GSMUA_Achr6P01870_001 Banana cytosol 41.01 40.64
HORVU7Hr1G081410.3 Barley plasma membrane 26.73 40.56
GSMUA_AchrUn_... Banana golgi 39.29 40.02
CDX72325 Canola plasma membrane 30.99 39.91
CDY54213 Canola plasma membrane 40.67 39.71
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 24.65 39.7
CDY51113 Canola plasma membrane 38.94 39.35
CDX85724 Canola plasma membrane 38.82 39.23
OQU89536 Sorghum cytosol 40.78 39.16
CDY56837 Canola plasma membrane 41.36 39.11
HORVU5Hr1G063490.1 Barley golgi, vacuole 19.12 39.06
TraesCS7B01G242400.1 Wheat plasma membrane 40.55 38.9
KRH50532 Soybean plasma membrane 35.94 38.61
CDX73196 Canola cytosol, peroxisome, plasma membrane 40.55 38.55
GSMUA_Achr3P04970_001 Banana plasma membrane 42.28 38.35
CDY36173 Canola plasma membrane 35.6 38.34
Os09t0429000-00 Rice plasma membrane 41.13 38.26
CDY45595 Canola plasma membrane 37.67 38.02
TraesCS5D01G226500.2 Wheat cytosol 38.25 37.9
GSMUA_Achr4P02110_001 Banana cytosol 35.25 37.87
TraesCS7A01G341200.1 Wheat plasma membrane 38.94 37.77
TraesCS5B01G217800.1 Wheat plasma membrane 36.98 37.68
KRH50533 Soybean plasma membrane 34.79 37.66
TraesCS5A01G218900.1 Wheat plasma membrane 33.64 37.63
Os09t0428300-00 Rice plasma membrane 37.79 37.61
HORVU7Hr1G031400.1 Barley plasma membrane 31.45 37.6
Os06t0190800-01 Rice cytosol, plasma membrane 35.37 37.44
TraesCS5D01G228000.1 Wheat plasma membrane 33.87 37.12
TraesCS5A01G219800.1 Wheat plasma membrane 39.52 37.08
Os09t0429400-00 Rice golgi 39.75 36.94
TraesCS5D01G227800.1 Wheat plasma membrane 39.17 36.8
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 21.08 36.6
HORVU5Hr1G063530.5 Barley plasma membrane 38.36 36.31
HORVU5Hr1G072170.1 Barley plasma membrane 33.29 36.22
HORVU5Hr1G063500.1 Barley plasma membrane 38.71 36.17
Os09t0429500-00 Rice plasma membrane 39.4 36.15
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 40.67 36.09
TraesCS5A01G218400.1 Wheat plasma membrane 38.48 36.07
OQU84757 Sorghum plasma membrane 37.79 36.0
KXG19504 Sorghum golgi, plasma membrane, vacuole 36.06 35.94
TraesCS5A01G218700.1 Wheat plasma membrane 37.79 35.77
GSMUA_Achr9P13570_001 Banana plasma membrane 37.44 35.64
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 26.04 35.59
TraesCS5B01G218700.1 Wheat plasma membrane 38.13 35.48
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 40.09 35.44
TraesCS2D01G025600.1 Wheat plasma membrane 26.61 35.43
HORVU5Hr1G063540.6 Barley plasma membrane 37.21 35.42
TraesCS5D01G226700.3 Wheat plasma membrane 37.33 35.33
TraesCS5A01G218600.1 Wheat plasma membrane 37.1 35.27
Os09t0431200-01 Rice endoplasmic reticulum, extracellular 38.59 35.26
HORVU5Hr1G063440.1 Barley plasma membrane 39.86 35.23
TraesCS7B01G057800.1 Wheat plasma membrane 35.71 35.23
TraesCS5D01G225900.1 Wheat golgi 35.14 35.22
HORVU5Hr1G010420.17 Barley plasma membrane 36.41 35.11
CDY68132 Canola plasma membrane 40.78 35.08
TraesCS5B01G217700.1 Wheat plasma membrane 36.87 35.05
TraesCS5A01G218000.1 Wheat plasma membrane 39.52 35.0
TraesCS5B01G218900.1 Wheat plasma membrane 38.02 34.88
HORVU5Hr1G063480.2 Barley golgi, plasma membrane 39.17 34.8
TraesCS5B01G217000.1 Wheat mitochondrion, plasma membrane 35.83 34.79
TraesCS5D01G226600.1 Wheat plasma membrane 37.21 34.77
Zm00001d020563_P001 Maize plasma membrane 38.02 34.66
TraesCS5D01G226300.1 Wheat plasma membrane 38.36 34.65
OQU89527 Sorghum plasma membrane 37.1 34.62
EER98937 Sorghum plasma membrane 37.67 34.6
TraesCS5D01G266800.1 Wheat plasma membrane 35.6 34.56
TraesCS5A01G042800.1 Wheat plasma membrane 35.71 34.52
TraesCS5B01G257800.1 Wheat plasma membrane 35.83 34.44
CDY13449 Canola cytosol 38.02 34.41
TraesCS5A01G218200.1 Wheat plasma membrane 38.36 34.37
TraesCS3A01G023600.2 Wheat plasma membrane 35.6 34.26
Zm00001d020568_P001 Maize golgi 37.9 34.24
TraesCS5B01G046400.1 Wheat plasma membrane 35.37 34.19
Os09t0429200-00 Rice plasma membrane 37.33 34.18
KXG35672 Sorghum mitochondrion, plasma membrane 38.13 34.12
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 38.94 34.11
TraesCS5D01G051300.1 Wheat golgi 35.14 33.93
Zm00001d005783_P002 Maize plasma membrane 38.02 33.85
Os09t0428600-00 Rice plasma membrane 20.97 33.64
TraesCS5B01G217500.1 Wheat plasma membrane 36.87 33.61
TraesCS5D01G226800.1 Wheat plasma membrane 36.75 33.51
TraesCS5A01G218300.1 Wheat plasma membrane 36.64 33.33
TraesCS5D01G226400.1 Wheat plasma membrane 36.41 33.3
CDY71348 Canola golgi, plasma membrane 10.14 33.21
Os09t0431100-01 Rice plasma membrane 36.52 33.19
TraesCS6B01G438400.1 Wheat plasma membrane 34.45 33.19
Zm00001d005782_P001 Maize plasma membrane 37.44 33.16
OQU89534 Sorghum plasma membrane 34.68 33.04
TraesCS6D01G330900.1 Wheat plasma membrane 38.36 33.04
Os02t0787600-01 Rice golgi 37.56 33.0
EER98936 Sorghum plasma membrane 35.71 32.77
KXG35671 Sorghum plasma membrane 36.87 32.65
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 27.42 32.65
TraesCS6A01G347900.1 Wheat plasma membrane 37.9 32.64
TraesCS6B01G380800.1 Wheat plasma membrane 38.36 32.58
TraesCS6D01G330500.1 Wheat plasma membrane 38.13 32.55
HORVU6Hr1G083680.5 Barley plasma membrane 37.9 32.48
CDY35797 Canola plasma membrane 30.65 32.36
HORVU6Hr1G083570.16 Barley plasma membrane 37.9 32.32
KXG31244 Sorghum mitochondrion 37.56 32.21
TraesCS6B01G381400.1 Wheat plasma membrane 37.56 32.15
TraesCS2D01G462300.1 Wheat plasma membrane 36.06 32.14
Zm00001d018332_P001 Maize plastid 36.87 32.13
TraesCS6A01G347400.1 Wheat plastid 38.25 31.92
GSMUA_Achr6P01860_001 Banana cytosol, peroxisome, plasma membrane 35.48 31.88
TraesCS7A01G154100.1 Wheat plasma membrane 34.22 31.73
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 36.87 31.53
Zm00001d018329_P001 Maize plasma membrane 36.18 31.4
CDY06165 Canola plasma membrane 31.45 31.34
TraesCS5D01G226000.1 Wheat plasma membrane 33.64 31.3
TraesCS5B01G217100.1 Wheat plasma membrane 33.64 31.2
KXG35670 Sorghum plasma membrane 35.02 31.12
HORVU5Hr1G063430.8 Barley plasma membrane 33.18 30.67
CDY63640 Canola cytosol 19.12 30.57
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 35.48 30.29
CDY24327 Canola plasma membrane 31.8 30.26
CDX80728 Canola cytosol 8.41 30.17
CDX76331 Canola plasma membrane 31.57 30.11
CDX69127 Canola plasma membrane 31.57 30.04
CDY52597 Canola plasma membrane 31.45 29.93
CDX73718 Canola plasma membrane 30.65 29.85
CDX78008 Canola plasma membrane 30.18 29.41
CDY65624 Canola plasma membrane 29.03 28.97
TraesCS6B01G380900.1 Wheat plasma membrane 32.03 28.87
CDY10044 Canola plasma membrane 31.22 28.86
CDX95758 Canola cytosol 13.25 28.26
CDY49512 Canola plasma membrane 30.76 28.02
CDY46839 Canola plasma membrane 30.65 27.97
CDX75491 Canola cytosol, plasma membrane, plastid 6.45 27.45
CDX84734 Canola plasma membrane 29.15 27.32
CDY66699 Canola plasma membrane 29.15 27.32
CDY15337 Canola plasma membrane 28.0 27.18
CDY48270 Canola plasma membrane 28.8 27.11
CDY12210 Canola plasma membrane 28.69 27.04
CDY68928 Canola extracellular, plasma membrane 15.21 24.77
CDY70557 Canola extracellular, plasma membrane 15.21 24.77
CDY12211 Canola plasma membrane 25.12 24.52
VIT_04s0069g00330.t01 Wine grape plastid 48.62 23.98
CDY66698 Canola plasma membrane 24.19 23.62
CDX75490 Canola extracellular, plasma membrane, vacuole 15.67 23.37
CDY48271 Canola plastid 19.7 23.14
CDX84735 Canola plasma membrane 23.5 22.97
Os09t0428750-01 Rice mitochondrion 0.58 4.13
CDY72467 Canola cytosol 0.12 1.35
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078H1U9UniProt:A0A078H1U9
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY31756ProteinID:CDY31756ProteinID:CDY31756.1GO:GO:0003674GO:GO:0004871
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235
GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00050403001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497
PFAM:PF01094PIRSF:PIRSF037090PANTHER:PTHR43891PANTHER:PTHR43891:SF3InterPro:Peripla_BP_ISMART:SM00079
SUPFAM:SSF53822SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EF31BCSEG:seg
Description
BnaA04g16920DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078H1U9]
Coordinates
chrLK032278:-:305489..309391
Molecular Weight (calculated)
97349.8 Da
IEP (calculated)
8.151
GRAVY (calculated)
-0.103
Length
868 amino acids
Sequence
(BLAST)
001: MSLSDFYQTH PHYRTRLALH IRDSMEDIVE ASVAAYDLIN NEQVRAIIGP RSSMQAEFMI KLATKSQVPT ITFSATSPLL RTINNPYFVR ATIDDSFQAE
101: AIASIVKSFE WRSVVAIYVD NELEASDDNI LKELYKLKTE QTRVFVINMD SSLGFRVLKK AREIGMMEEG YVWLLSNGMT HMMRDNGRSL ETMQGLLGVR
201: SHVPQSKERE DFSLRWKRKL EKENRAGDGT EPNVFALWAY DSVTALAMAV EKTNTKTYMT TYGPHLLEAL SDVEFKGLAG DFKLINRQLE SSTFEIINVI
301: GDEERIIGLW TPSNGLVNAK SNKTTSFLGK RFGPVIWPGN SNVVPKGWEI PTSGKKIKVG IPVNKGFLNF VEIKTNPISN LTTVRGYAID IFEAALKELP
401: YSVIPQYGFE PPGDDYNDLV YQVFDGKWDA IVGDITITSN RSSYVDFTLP YTESGVSMIV PVTSNKNKNA WVFLKPWSLD LWITTGCFFV LIGFVVWLFE
501: HRVNTDFRGP PHHQIGTSVC FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAS LTSFLTVQSL HPTATNVEDL IRSGESVGYQ QGGFVKDILL
601: GLKFSESQLK PFGSAEECDD LLSKGTSKGG IAAAFDEVPY LKDIVSHNCS KYAMVEPSFK TAGFKPSFKT AGFGFAFPKN SPMTGDVSRA ILKVIQSKEM
701: SLIENKWFNR LSLASDCPGP DTADLSSNRL TLSSFWGLFL ISGVASFLAL LIFVALFLYE HRHTLCSNSE GSIWRKLKSL FIIFDAKDIK SHTFKSSAVH
801: NSFERADKAI ATKHVIKQGV LAKGACFSMS EEHFRTQPKH NKFGESDIEF VVERQREIKQ TPRCKLSA
Best Arabidopsis Sequence Match ( AT2G29110.1 )
(BLAST)
001: MNPKKNNNTF LSYFVCLFLL LEVGLGQNQI SEIKVGVVLD LNTTFSKICL TSINLALSDF YKDHPNYRTR LALHVRDSMK DTVQASAAAL DLIQNEQVSA
101: IIGPIDSMQA KFMIKLANKT QVPTISFSAT SPLLTSIKSD YFVRGTIDDS YQVKAIAAIF ESFGWRSVVA IYVDNELGEG IMPYLFDALQ DVQVDRSVIP
201: SEANDDQILK ELYKLMTRQT RVFVVHMASR LASRIFEKAT EIGMMEEGYV WLMTNGMTHM MRHIHHGRSL NTIDGVLGVR SHVPKSKGLE DFRLRWKRNF
301: KKENPWLRDD LSIFGLWAYD STTALAMAVE KTNISSFPYN NASGSSNNMT DLGTLHVSRY GPSLLEALSE IRFNGLAGRF NLIDRQLESP KFEIINFVGN
401: EERIVGFWTP SNGLVNVNSN KTTSFTGERF GPLIWPGKST IVPKGWEIPT NGKKIKVGVP VKKGFFNFVE VITDPITNIT TPKGYAIDIF EAALKKLPYS
501: VIPQYYRFES PDDDYDDLVY KVDNGTLDAV VGDVTITAYR SLYADFTLPY TESGVSMMVP VRDNENKNTW VFLKPWGLDL WVTTACFFVL IGFVVWLFEH
601: RVNTDFRGPP HHQIGTSFWF SFSTMVFAHR EKVVSNLARF VVVVWCFVVL VLTQSYTANL TSFLTVQRFQ PAAINVKDLI KNGDYVGYQH GAFVKDFLIK
701: EGFNVSKLKP FGSSEECHAL LSNGSISAAF DEVAYLRAIL SQYCSKYAIV EPTFKTAGFG FAFPRNSPLT GDVSKAILNV TQGDEMQHIE NKWFMKQNDC
801: PDPKTALSSN RLSLRSFWGL FLIAGIASFL ALLIFVFLFL YENRHTLCDD SEDSIWRKLT SLFRNFDEKD IKSHTFKSSA VHHVSSPMTQ YIPSPSTLQI
901: APRPHSPSQD RAFELRRVSF TPNEERLTTQ TIHFEDEESD IECVVEQ
Arabidopsis Description
ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.