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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71348 Canola golgi, plasma membrane 82.84 63.77
CDX80728 Canola cytosol 53.92 45.45
CDY65624 Canola plasma membrane 96.57 22.64
Bra011603.1-P Field mustard plasma membrane 100.0 22.34
CDX69127 Canola plasma membrane 97.55 21.82
AT4G35290.2 Thale cress plasma membrane 87.25 19.52
CDX76331 Canola plasma membrane 82.84 18.57
CDY24327 Canola plasma membrane 75.0 16.78
CDY52597 Canola plasma membrane 74.02 16.56
KRH74102 Soybean cytosol, nucleus, peroxisome 48.04 15.1
CDY35797 Canola plasma membrane 53.92 13.38
CDY48271 Canola plastid 46.08 12.72
KRH14012 Soybean plasma membrane 56.86 12.68
VIT_03s0038g03920.t01 Wine grape plasma membrane 56.86 12.65
CDY31759 Canola cytosol, peroxisome, plasma membrane 28.92 12.53
HORVU0Hr1G018770.1 Barley plasma membrane 47.06 11.96
GSMUA_Achr9P23900_001 Banana plasma membrane 52.94 11.76
Os02t0117500-01 Rice plasma membrane 53.43 11.55
GSMUA_Achr3P27050_001 Banana plasma membrane 51.47 11.48
GSMUA_Achr5P19180_001 Banana plasma membrane 50.0 11.33
Zm00001d015007_P003 Maize plasma membrane 49.51 11.21
CDY06165 Canola plasma membrane 47.06 11.02
TraesCS6B01G066200.1 Wheat plasma membrane 49.51 10.97
TraesCSU01G108800.1 Wheat plasma membrane 49.51 10.94
CDX84735 Canola plasma membrane 47.55 10.92
CDY66698 Canola plasma membrane 47.55 10.91
TraesCS6B01G065400.1 Wheat plasma membrane 49.51 10.91
TraesCS6A01G048700.1 Wheat plasma membrane 49.02 10.8
CDX73718 Canola plasma membrane 47.06 10.77
CDX78008 Canola plasma membrane 47.06 10.77
TraesCS6A01G049900.1 Wheat plasma membrane 48.53 10.73
TraesCSU01G107700.2 Wheat plasma membrane 48.53 10.69
HORVU0Hr1G036590.3 Barley plasma membrane 48.53 10.61
HORVU2Hr1G049510.4 Barley plasma membrane 48.53 10.61
KXG29299 Sorghum plasma membrane 48.04 10.58
TraesCSU01G107900.1 Wheat plasma membrane 48.04 10.58
HORVU6Hr1G009520.1 Barley plasma membrane 48.04 10.58
TraesCS6B01G065500.1 Wheat plasma membrane 48.04 10.58
TraesCS6A01G048800.1 Wheat plasma membrane 48.04 10.58
TraesCS6B01G065700.1 Wheat plasma membrane 47.55 10.51
TraesCSU01G108000.1 Wheat plasma membrane 47.55 10.5
CDY50141 Canola plasma membrane 26.96 10.38
TraesCS6A01G049000.1 Wheat plasma membrane 47.06 10.31
CDY12211 Canola plasma membrane 44.61 10.24
CDY10044 Canola plasma membrane 47.06 10.22
Zm00001d054016_P004 Maize plasma membrane 47.55 10.2
CDY46839 Canola plasma membrane 47.55 10.2
CDY49512 Canola plasma membrane 47.55 10.18
OQU84212 Sorghum mitochondrion 44.61 10.01
TraesCS2A01G455200.2 Wheat plasma membrane 45.1 10.01
TraesCS2D01G455600.2 Wheat plasma membrane 45.1 10.01
TraesCS2B01G477300.4 Wheat plasma membrane 44.61 9.9
HORVU2Hr1G104920.3 Barley plasma membrane 46.08 9.89
Zm00001d002532_P003 Maize plasma membrane 44.61 9.77
KXG26996 Sorghum plasma membrane 44.61 9.73
CDX84734 Canola plasma membrane 43.63 9.61
CDY66699 Canola plasma membrane 43.14 9.5
CDY12210 Canola plasma membrane 40.69 9.01
CDY48270 Canola plasma membrane 40.69 9.0
CDY15337 Canola plasma membrane 39.22 8.95
PGSC0003DMT400038012 Potato plasma membrane 50.0 8.31
CDY70035 Canola cytosol, plasma membrane 27.94 7.05
CDX72325 Canola plasma membrane 22.55 6.82
CDY58212 Canola cytosol, plasma membrane 26.96 6.59
CDY31756 Canola cytosol, peroxisome, plastid 27.45 6.45
CDY39533 Canola plasma membrane 30.39 6.39
CDY38574 Canola plasma membrane 29.41 6.2
CDY31755 Canola cytosol 26.96 5.96
CDY45595 Canola plasma membrane 23.04 5.47
CDY36173 Canola plasma membrane 21.57 5.46
CDY51113 Canola plasma membrane 22.55 5.36
CDY56837 Canola plasma membrane 24.02 5.34
CDY54213 Canola plasma membrane 23.04 5.29
CDX85724 Canola plasma membrane 22.06 5.24
CDY00544 Canola plasma membrane 19.12 5.01
CDY13449 Canola cytosol 23.53 5.01
CDX73196 Canola cytosol, peroxisome, plasma membrane 21.08 4.71
CDY68132 Canola plasma membrane 22.55 4.56
CDX75490 Canola extracellular, plasma membrane, vacuole 7.35 2.58
Os02t0117600-01 Rice plastid 0.49 0.41
CDY63640 Canola cytosol 0.98 0.37
CDY68928 Canola extracellular, plasma membrane 0.49 0.19
CDY70557 Canola extracellular, plasma membrane 0.49 0.19
CDY72467 Canola cytosol 0.0 0.0
CDX95758 Canola cytosol 0.0 0.0
Os04t0585200-02 Rice extracellular 0.0 0.0
Zm00001d033769_P001 Maize golgi, plasma membrane 0.0 0.0
Protein Annotations
MapMan:24.3.9Gene3D:3.40.190.10GO:A0A078CEE2EnsemblPlants:CDX75491ProteinID:CDX75491ProteinID:CDX75491.1
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00121388001
InterPro:Iontro_rcptPFAM:PF00497PANTHER:PTHR43891PANTHER:PTHR43891:SF18SMART:SM00079SUPFAM:SSF53850
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EEC59F:::
Description
BnaA01g02110D
Coordinates
chrLK031804:+:1369555..1370458
Molecular Weight (calculated)
22990.4 Da
IEP (calculated)
6.276
GRAVY (calculated)
-0.237
Length
204 amino acids
Sequence
(BLAST)
001: MIDELNIARS RLVALGSPKE YATALQNGTV AAIVDERPYV DLFLSEFCGF AIRGQEFTRS GWGFAFPRDS PLAVDMSTAI LGLSEAGKLQ KIHDKWLSKS
101: NCSNVNGSAS DDDPEQLKLR SFWGLFLLCG IACFIALFIY FFMIVRDFCN HHKKPEEEEA TVPSPEVSRS KTLQTFLAYF DEKEAESSRR LKRKRNDDLS
201: LKSS
Best Arabidopsis Sequence Match ( AT4G35290.1 )
(BLAST)
001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI
Arabidopsis Description
GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.