CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011603.1-P	Field mustard	plasma membrane	94.5	60.24
CDX69127	Canola	plasma membrane	92.78	59.21
CDY65624	Canola	plasma membrane	80.07	53.56
CDX76331	Canola	plasma membrane	80.07	51.21
AT4G35290.2	Thale cress	plasma membrane	77.49	49.45
CDY70557	Canola	extracellular, plasma membrane	43.3	47.28
Os04t0585200-02	Rice	extracellular	43.81	47.22
CDY68928	Canola	extracellular, plasma membrane	43.13	47.09
CDY24327	Canola	plasma membrane	72.16	46.05
CDY52597	Canola	plasma membrane	71.99	45.94
Zm00001d033769_P001	Maize	golgi, plasma membrane	41.92	38.67
CDX95758	Canola	cytosol	25.43	36.36
VIT_03s0038g03920.t01	Wine grape	plasma membrane	55.67	35.33
KRH14012	Soybean	plasma membrane	51.03	32.46
GSMUA_Achr9P23900_001	Banana	plasma membrane	47.77	30.28
GSMUA_Achr3P27050_001	Banana	plasma membrane	47.42	30.16
CDX78008	Canola	plasma membrane	44.67	29.18
Zm00001d015007_P003	Maize	plasma membrane	45.02	29.08
CDX73718	Canola	plasma membrane	44.5	29.07
TraesCS6B01G066200.1	Wheat	plasma membrane	45.53	28.77
GSMUA_Achr5P19180_001	Banana	plasma membrane	44.33	28.67
TraesCS2B01G477300.4	Wheat	plasma membrane	45.19	28.62
TraesCS2A01G455200.2	Wheat	plasma membrane	45.19	28.62
TraesCS6A01G049900.1	Wheat	plasma membrane	45.36	28.6
TraesCSU01G108800.1	Wheat	plasma membrane	45.19	28.49
Zm00001d002532_P003	Maize	plasma membrane	45.53	28.46
TraesCSU01G107900.1	Wheat	plasma membrane	45.19	28.4
TraesCS2D01G455600.2	Wheat	plasma membrane	44.85	28.4
HORVU0Hr1G036590.3	Barley	plasma membrane	45.02	28.08
HORVU2Hr1G049510.4	Barley	plasma membrane	45.02	28.08
Os02t0117500-01	Rice	plasma membrane	45.53	28.07
TraesCS6A01G048800.1	Wheat	plasma membrane	44.5	27.97
TraesCS6B01G065500.1	Wheat	plasma membrane	44.5	27.97
TraesCS6B01G065700.1	Wheat	plasma membrane	44.33	27.95
KXG29299	Sorghum	plasma membrane	44.33	27.86
OQU84212	Sorghum	mitochondrion	43.3	27.72
TraesCSU01G108000.1	Wheat	plasma membrane	43.99	27.71
KXG26996	Sorghum	plasma membrane	44.33	27.59
TraesCS6A01G049000.1	Wheat	plasma membrane	43.99	27.5
CDX84735	Canola	plasma membrane	41.92	27.48
HORVU2Hr1G104920.3	Barley	plasma membrane	44.67	27.37
Zm00001d054016_P004	Maize	plasma membrane	44.67	27.34
CDY66698	Canola	plasma membrane	41.75	27.33
TraesCS6A01G048700.1	Wheat	plasma membrane	43.47	27.32
TraesCS6B01G065400.1	Wheat	plasma membrane	43.3	27.21
TraesCSU01G107700.2	Wheat	plasma membrane	43.13	27.11
CDY06165	Canola	plasma membrane	40.55	27.1
CDY35797	Canola	plasma membrane	38.14	27.01
HORVU6Hr1G009520.1	Barley	plasma membrane	42.78	26.89
CDY10044	Canola	plasma membrane	43.3	26.84
CDY49512	Canola	plasma membrane	43.81	26.76
CDY46839	Canola	plasma membrane	43.47	26.6
HORVU0Hr1G018770.1	Barley	plasma membrane	36.43	26.4
PGSC0003DMT400038012	Potato	plasma membrane	52.92	25.08
CDY12211	Canola	plasma membrane	36.94	24.18
KRH74102	Soybean	cytosol, nucleus, peroxisome	26.29	23.57
CDY15337	Canola	plasma membrane	34.88	22.71
CDX84734	Canola	plasma membrane	35.91	22.57
CDY48270	Canola	plasma membrane	35.74	22.56
CDY66699	Canola	plasma membrane	35.57	22.35
CDY48271	Canola	plastid	28.35	22.33
CDY12210	Canola	plasma membrane	35.05	22.15
CDY63640	Canola	cytosol	20.45	21.92
CDY54213	Canola	plasma membrane	28.18	18.45
CDY36173	Canola	plasma membrane	21.99	15.88
CDY39533	Canola	plasma membrane	26.46	15.86
CDY31755	Canola	cytosol	25.09	15.82
CDY45595	Canola	plasma membrane	23.2	15.7
CDY31756	Canola	cytosol, peroxisome, plastid	23.37	15.67
CDY00544	Canola	plasma membrane	20.96	15.66
CDY38574	Canola	plasma membrane	25.6	15.41
CDY56837	Canola	plasma membrane	24.23	15.36
CDX73196	Canola	cytosol, peroxisome, plasma membrane	23.71	15.12
CDX85724	Canola	plasma membrane	22.16	15.02
CDY70035	Canola	cytosol, plasma membrane	20.79	14.96
CDY51113	Canola	plasma membrane	21.82	14.78
CDY13449	Canola	cytosol	24.05	14.6
CDY58212	Canola	cytosol, plasma membrane	20.79	14.51
CDY68132	Canola	plasma membrane	24.57	14.17
CDX72325	Canola	plasma membrane	16.32	14.1
CDX75491	Canola	cytosol, plasma membrane, plastid	2.58	7.35
CDY71348	Canola	golgi, plasma membrane	2.41	5.28
CDX80728	Canola	cytosol	1.55	3.72
CDY50141	Canola	plasma membrane	3.26	3.58
CDY31759	Canola	cytosol, peroxisome, plasma membrane	2.41	2.97
Os02t0117600-01	Rice	plastid	0.0	0.0
CDY72467	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX75490	EnsemblPlantsGene:GSBRNA2T00121387001	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	GO:A0A078CF62	InterPro:ANF_lig-bd_rcpt
InterPro:Peripla_BP_I	PANTHER:PTHR43891	PANTHER:PTHR43891:SF18	PFAM:PF01094	ProteinID:CDX75490	ProteinID:CDX75490.1
SignalP:SignalP-noTM	SUPFAM:SSF53822	SUPFAM:SSF53850	UniParc:UPI0004EE9A7C	MapMan:24.3.9	:

Description

BnaA01g02120D

Coordinates

chrLK031804:+:1367481..1369366

Molecular Weight (calculated)

64458.0 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.020

Length

582 amino acids

Sequence
(BLAST)

001: MFWVLALLSS FIVLSGDVIV LSEGASSRPH HINVGAIFSL STLYGQVADI AMKAAEDDVN SDPTFLNGSK LRILMYDAKR NGFLSIMKAL QFMETDSVAI
101: IGPQTSIMAH VLSYLGNELN VPMCSFTALD PTLSPLQFPF FVQTAPSDLF LMRAVAEMIT YYGWSDVIAL YNDDDNSRNG VTSLGDELEG RRCKISYKAV
201: LPLDVVIGSP REIVDELVKI QGMESRVIIV NTFPKTGRMI FKEAKRLGMM GRGYVWIATT WMTSLLDSAN PLSLPKVAKS LTGVLTLRIH TPESRKKRDF
301: AARWNKLRNG TVGLNVYGLY AYDTVWIIAR AVKSLLDSGA NISFSSDSRL NHLKGGTLNL AALSMFDQGQ QFLDYIVETK MSGVTGPVQF LPDRSMIQPA
401: YDIINVVGDG LRQIGYWSNH SGLSVIPPEL LYSKPSNRSS SNQHLKNVTW PGGGSVTPRG WVFPDNGRRL RIGVPNRASF KDFVSKVNGS NQIDGYSINV
501: FEAAVKLLSY PVPHEFVLFG DGLKNPNYND LVNNLTTGVK PKNQNQTETK LPMLLKLQLA IRVHAQIFFT SCMNSNLQER IQ

Best Arabidopsis Sequence Match ( AT4G35290.1 )
(BLAST)

001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI

Arabidopsis Description

GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.