Factsheet for TraesCSU01G107700.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G048700.1	Wheat	plasma membrane	96.98	96.98
TraesCS6B01G065400.1	Wheat	plasma membrane	96.98	96.98
HORVU6Hr1G009520.1	Barley	plasma membrane	95.03	95.03
TraesCSU01G107900.1	Wheat	plasma membrane	87.91	87.91
TraesCSU01G108000.1	Wheat	plasma membrane	87.26	87.45
TraesCSU01G108800.1	Wheat	plasma membrane	85.75	86.02
KXG29299	Sorghum	plasma membrane	79.37	79.37
Zm00001d015007_P003	Maize	plasma membrane	76.35	78.47
Os02t0117500-01	Rice	plasma membrane	79.91	78.39
Zm00001d033769_P001	Maize	golgi, plasma membrane	53.02	77.81
Zm00001d054016_P004	Maize	plasma membrane	78.62	76.55
OQU84212	Sorghum	mitochondrion	70.84	72.17
GSMUA_Achr9P23900_001	Banana	plasma membrane	58.32	58.82
GSMUA_Achr3P27050_001	Banana	plasma membrane	58.1	58.8
CDY71348	Canola	golgi, plasma membrane	15.77	55.09
VIT_18s0122g00990.t01	Wine grape	plasma membrane	54.64	54.18
KRH60898	Soybean	plasma membrane	53.02	53.08
Solyc04g082610.2.1	Tomato	plasma membrane	53.02	52.91
VIT_07s0031g02170.t01	Wine grape	plasma membrane	53.46	52.88
KRH51581	Soybean	plasma membrane	53.02	52.85
VIT_03s0038g03920.t01	Wine grape	plasma membrane	52.27	52.78
CDY35797	Canola	plasma membrane	46.65	52.55
PGSC0003DMT400025675	Potato	plasma membrane	52.81	52.52
Bra034931.1-P	Field mustard	plasma membrane	51.51	51.35
CDX76331	Canola	plasma membrane	50.43	51.32
KRH07800	Soybean	plasma membrane	50.76	51.31
KRH39417	Soybean	golgi, plasma membrane, plastid	51.51	51.29
AT1G42540.2	Thale cress	plasma membrane	51.4	51.02
CDX69127	Canola	plasma membrane	49.89	50.66
KRH39414	Soybean	plasma membrane	51.4	50.53
CDY65624	Canola	plasma membrane	47.41	50.46
Bra011603.1-P	Field mustard	plasma membrane	49.68	50.38
KRH14012	Soybean	plasma membrane	49.78	50.38
AT4G35290.2	Thale cress	plasma membrane	49.46	50.22
CDY52597	Canola	plasma membrane	49.35	50.11
CDY24327	Canola	plasma membrane	49.24	50.0
KRH39412	Soybean	plasma membrane	50.97	49.84
CDX73718	Canola	plasma membrane	47.84	49.72
KRH76527	Soybean	plasma membrane	50.32	49.68
Solyc02g082480.2.1	Tomato	plasma membrane	51.3	49.58
KRH28939	Soybean	plasma membrane	50.11	49.47
CDX78008	Canola	plasma membrane	47.41	49.27
Bra036795.1-P	Field mustard	plasma membrane	47.41	49.27
CDY70557	Canola	extracellular, plasma membrane	28.29	49.16
AT2G17260.1	Thale cress	plasma membrane	49.03	49.08
CDY68928	Canola	extracellular, plasma membrane	28.19	48.97
CDX75491	Canola	cytosol, plasma membrane, plastid	10.69	48.53
CDX80728	Canola	cytosol	12.63	48.35
AT3G51480.1	Thale cress	plasma membrane	46.76	47.95
CDX95758	Canola	cytosol	20.19	45.95
CDX75490	Canola	extracellular, plasma membrane, vacuole	27.11	43.13
KRH74102	Soybean	cytosol, nucleus, peroxisome	30.13	42.99
Bra020812.1-P	Field mustard	plasma membrane	43.3	39.55
PGSC0003DMT400038012	Potato	plasma membrane	47.95	36.16
Os02t0117600-01	Rice	plastid	0.22	0.83

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891
PANTHER:PTHR43891:SF4	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G107700	EnsemblPlants:TraesCSU01G107700.2	TIGR:cd06366	TIGR:cd13686
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:94047583..94051189

Molecular Weight (calculated)

102911.0 Da

IEP (calculated)

6.336

GRAVY (calculated)

0.092

Length

926 amino acids

Sequence
(BLAST)

001: MEIAFLTLLV LSLLLSPSGI CKSLAAGPPV VNIGSILQFN STTGGVAEVA IRSALEDINS DPTVLNGTTL KVKIKDTNCF DGFLGMVQGL QFMETDVIAI
101: VGPQCSTISH IISYVVNELR VPLMSFASDA TLSTIQFPFF VRTGSSDLYQ MAAVAALVDY NHWKIVTAIY IDNDYGRNGI IALDDALTAK RCKISYKVSF
201: PSNAKRSELI SLLVSVSYME SRVIILHTGA EHGLKFFSMA NQLNMMGNSY VWIATDWLSA YLDANSSVPA DIISGMQGVL TLRPHIPNSK MKSNLISKWS
301: SQSHKYNHSD LRVNTYGFYV YDSVWALAWA LDAFFSDGGR ISFSNDSKLH DEAGETLHLE AMSIFDMGNK LLENIRKVNF TGASGQVQFD ASGDLIHPAY
401: DIINIIGNGM RTVGFWSNYS GLLSTISPEA LYSKPPNTSL ANQHLYDVIW PGETAQRPRG WVFPSNAKEL KIGVPNRFSF KEFVTEDNGT GSIKGYCIDV
501: FTQALSLLPY PVSYKFIPFG SGTENPNYDK LIHMVESNEF DAAIGDIAIT MSRTVTIDFT QPFIETGLVI LAPVKKHIKT SWAFLQPFTL EMWCVTGLFF
601: LIVGVVVWVL EHRINEDFRG PPSQQIITIF WFSFSTLFFS HRENTMSTLG RGVLLIWLFV VLIIVSSYTA SLTSILTVQQ LDTSIKGIDD LKNSDDPVGF
701: QVGSFAQDYM VNELNISRSR LRALGSPQEY ADALQLGPKK GGVMAIVDER PYVELFLSTY CKIAVAGSDF TSRGWGFAFP RDSPLQVDLS TAILSLSENG
801: ELQRIRDKWV KTGDCTTDNS EFVDSDQLRL ESFFGLFLIC GVACVLALLI YFGIMLRKYL KHHPRRSLRR FISFVHSKET PKNMERRSMS LLRSSTPTTP
901: MSSLTALDIE RPARPVRNDT AIDMES

Best Arabidopsis Sequence Match ( AT1G42540.1 )
(BLAST)

001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

Arabidopsis Description

GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.