Factsheet for Bra036795.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78008	Canola	plasma membrane	100.0	100.0
AT3G51480.1	Thale cress	plasma membrane	86.31	85.16
VIT_07s0031g02170.t01	Wine grape	plasma membrane	63.52	60.47
KRH07800	Soybean	plasma membrane	60.27	58.62
KRH39412	Soybean	plasma membrane	60.83	57.23
Bra034931.1-P	Field mustard	plasma membrane	57.91	55.54
KRH76527	Soybean	plasma membrane	58.36	55.44
KRH28939	Soybean	plasma membrane	58.36	55.44
Solyc02g082480.2.1	Tomato	plasma membrane	59.6	55.43
GSMUA_Achr3P27050_001	Banana	plasma membrane	56.79	55.3
GSMUA_Achr9P23900_001	Banana	plasma membrane	56.57	54.9
GSMUA_Achr5P19180_001	Banana	plasma membrane	55.22	54.67
Bra011603.1-P	Field mustard	plasma membrane	52.53	51.26
TraesCS2A01G455200.2	Wheat	plasma membrane	51.52	49.95
TraesCS2D01G455600.2	Wheat	plasma membrane	51.29	49.73
TraesCS2B01G477300.4	Wheat	plasma membrane	51.29	49.73
Zm00001d002532_P003	Maize	plasma membrane	51.85	49.62
KXG26996	Sorghum	plasma membrane	50.84	48.45
HORVU0Hr1G018770.1	Barley	plasma membrane	43.66	48.44
Zm00001d015007_P003	Maize	plasma membrane	48.82	48.28
TraesCSU01G107900.1	Wheat	plasma membrane	49.94	48.06
Bra015398.1-P	Field mustard	plasma membrane	51.29	48.05
KXG29299	Sorghum	plasma membrane	49.72	47.84
TraesCS6B01G065500.1	Wheat	plasma membrane	49.61	47.73
TraesCS6B01G065400.1	Wheat	plasma membrane	49.61	47.73
TraesCS6A01G048800.1	Wheat	plasma membrane	49.61	47.73
TraesCS6A01G049000.1	Wheat	plasma membrane	49.83	47.69
HORVU6Hr1G009520.1	Barley	plasma membrane	49.49	47.62
HORVU2Hr1G104920.3	Barley	plasma membrane	50.73	47.58
Os02t0117500-01	Rice	plasma membrane	50.39	47.56
TraesCS6B01G066200.1	Wheat	plasma membrane	49.16	47.56
TraesCS6A01G048700.1	Wheat	plasma membrane	49.38	47.52
TraesCSU01G108000.1	Wheat	plasma membrane	49.27	47.51
TraesCSU01G108800.1	Wheat	plasma membrane	49.16	47.45
TraesCS6B01G065700.1	Wheat	plasma membrane	49.16	47.45
TraesCS6A01G049900.1	Wheat	plasma membrane	49.16	47.45
TraesCSU01G107700.2	Wheat	plasma membrane	49.27	47.41
HORVU2Hr1G049510.4	Barley	plasma membrane	49.27	47.05
HORVU0Hr1G036590.3	Barley	plasma membrane	49.27	47.05
Bra032480.1-P	Field mustard	plasma membrane	50.73	47.03
Bra005589.1-P	Field mustard	plasma membrane	49.61	46.77
Os04t0585200-02	Rice	extracellular	28.28	46.67
OQU84212	Sorghum	mitochondrion	46.8	45.87
Zm00001d054016_P004	Maize	plasma membrane	48.37	45.32
Zm00001d033769_P001	Maize	golgi, plasma membrane	30.86	43.58
Bra005591.1-P	Field mustard	plasma membrane	42.65	41.21
Bra020812.1-P	Field mustard	plasma membrane	43.77	38.46
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.99	31.53
Bra040760.1-P	Field mustard	cytosol	28.28	29.93
Bra032072.1-P	Field mustard	plasma membrane	29.97	29.8
Bra040761.1-P	Field mustard	cytosol	31.09	29.75
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	30.64	29.23
Bra023313.1-P	Field mustard	plasma membrane	27.5	28.52
Bra032063.1-P	Field mustard	plasma membrane	29.29	28.28
Bra015817.1-P	Field mustard	plasma membrane	29.85	26.36
Bra023989.1-P	Field mustard	cytosol	27.05	24.47
Bra022887.1-P	Field mustard	plasma membrane	42.87	20.57
Os02t0117600-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	EnsemblPlantsGene:Bra036795
EnsemblPlants:Bra036795.1	EnsemblPlants:Bra036795.1-P	GO:GO:0003674	GO:GO:0004871	GO:GO:0004930	GO:GO:0004970
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0007186	GO:GO:0007267	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009719	GO:GO:0009864	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0035235	GO:GO:0038023	InterPro:GPCR_3	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	UniProt:M4F6T5
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PANTHER:PTHR43891
PANTHER:PTHR43891:SF13	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI0002542CDD	SEG:seg	:	:

Description

AT3G51480 (E=0.0) ATGLR3.6, GLR3.6 | ATGLR3.6 (GLUTAMATE RECEPTOR 3.6); intracellular ligand-gated ion channel

Coordinates

chrA09:+:25762588..25765963

Molecular Weight (calculated)

99353.3 Da

IEP (calculated)

8.573

GRAVY (calculated)

0.075

Length

891 amino acids

Sequence
(BLAST)

001: MKWLLLLLLL CHAVPLQGQS TNVSPRPQVV NIGSVFTFKS LIGKVIKVAM QAAVDDVNAN PTVLNNTRLN IIMHDTKFNG FMSIMEPLRF MENKTVAIIG
101: PQRPTSARVV SHVATELKIP ILSFTATDPT MSPRQFPFFI RTSQNDLFQM AAIADIVHHY GWREVIAIYG DDDYGQNGVA ALGDKLAEKR CRISYKAALP
201: PEPTRENITN LLIKVALSES RIIVVHAYFI WGLEVFNVAQ YLGMMSSGYV WIATNWLSTI IDTNSPPLPN NIQGVIALRL HTPDSVMKKS FVQRWRNVTN
301: VGLSTYGLYA YDTVWLLAHA IDDYLQRGGN VSFSTSPIVS ELRGGNLHLD ALKVFDGGNV FLESILKVDR VGLTGRMKFT KDRNLVNPSF DVINVIGTGH
401: RTVGYWSDHL GLSVMPPEEL ENASSSGQKL HSVVWPGQTT HTPRGWVFSN NGRHLRIGVP NRYRFEEVVS VQSNGIITGF CVDVFVAALS LLPYAVPYEL
501: VALGDGHDNP SNSELVRLIT AGVFDAGVGD ITIITERTKM ADFTQPYVES GLVVVAPVRK LGSNAMAFLR PFTPQMWLIA ASSFLIVGAV IWCLEHKHND
601: EFRGPPRRQV ITTFWFSFST LFFSHRETTV SNLGRIVLLI WLFIVLIINS SYTASLTSIL TVHQLSSPIK GIETLQTNND PIGYPQGSFV RDYLVNELRI
701: HESRLVPLWS PEEYEKALRD GPGKGGVAAI VGERAYIELF LSNRCEFGIV GQEFTKTGWG FAFPRNSPLA VDVSTAILQL SENGDLQRIR DKWLLRKACS
801: LQGAEIEVDR LELKSFWGLF VVCGLACVVA LAVYIVMMIR KFGRHCPVEA EGSIRRRSSP SASIHSFLSF VKEKEEDVKA RSSRERQLEH I

Best Arabidopsis Sequence Match ( AT3G51480.1 )
(BLAST)

001: MKWFLLMLII CNAVPLQGLT KIVSARPQVV NIGSVFTFNS LIGKVIKVAM DAAVEDVNAS PSILNTTTLR IIMHDTKYNG FMSIMEPLQF MESETVAIIG
101: PQRSTTARVV AHVATELKIP ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA ALGDRLSEKR CRISYKAALP
201: PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN
301: LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG
401: TGYTTIGYWF NHSGLSVMPA DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI TGFCVDVFIA AINLLPYAVP
501: FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK
601: HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE
701: LNIHVSRLVP LRSPEEYDKA LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI LQLSENGDMQ RIRDKWLLRK
801: ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS
901: RCN

Arabidopsis Description

GLR3.6Glutamate receptor 3.6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W41]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.