Factsheet for AT3G51480.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73718	Canola	plasma membrane	85.71	86.87
CDX78008	Canola	plasma membrane	85.16	86.31
Bra036795.1-P	Field mustard	plasma membrane	85.16	86.31
CDX95758	Canola	cytosol	36.1	80.1
VIT_07s0031g02170.t01	Wine grape	plasma membrane	62.46	60.26
KRH07800	Soybean	plasma membrane	58.47	57.64
KRH76527	Soybean	plasma membrane	58.58	56.4
KRH39412	Soybean	plasma membrane	59.03	56.28
KRH28939	Soybean	plasma membrane	58.14	55.97
GSMUA_Achr3P27050_001	Banana	plasma membrane	56.48	55.74
GSMUA_Achr5P19180_001	Banana	plasma membrane	55.37	55.56
Solyc02g082480.2.1	Tomato	plasma membrane	58.8	55.43
GSMUA_Achr9P23900_001	Banana	plasma membrane	56.15	55.23
AT1G42540.2	Thale cress	plasma membrane	55.81	54.02
AT4G35290.2	Thale cress	plasma membrane	51.27	50.77
TraesCS2A01G455200.2	Wheat	plasma membrane	51.61	50.71
TraesCS2D01G455600.2	Wheat	plasma membrane	51.38	50.49
AT2G17260.1	Thale cress	plasma membrane	51.61	50.38
TraesCS2B01G477300.4	Wheat	plasma membrane	51.16	50.27
Zm00001d002532_P003	Maize	plasma membrane	51.72	50.16
KXG26996	Sorghum	plasma membrane	50.61	48.88
Os04t0585200-02	Rice	extracellular	29.13	48.7
HORVU2Hr1G104920.3	Barley	plasma membrane	51.16	48.63
Zm00001d015007_P003	Maize	plasma membrane	48.39	48.5
HORVU0Hr1G018770.1	Barley	plasma membrane	42.97	48.32
AT1G05200.1	Thale cress	plasma membrane	50.94	47.97
TraesCSU01G107900.1	Wheat	plasma membrane	48.84	47.62
KXG29299	Sorghum	plasma membrane	48.84	47.62
AT2G32390.5	Thale cress	plasma membrane	50.17	47.53
TraesCS6A01G048800.1	Wheat	plasma membrane	48.73	47.52
TraesCS6B01G065500.1	Wheat	plasma membrane	48.62	47.41
TraesCSU01G108800.1	Wheat	plasma membrane	48.39	47.35
TraesCS6B01G066200.1	Wheat	plasma membrane	48.28	47.34
TraesCS6A01G049000.1	Wheat	plasma membrane	48.73	47.26
TraesCS6A01G048700.1	Wheat	plasma membrane	48.39	47.19
TraesCS6B01G065400.1	Wheat	plasma membrane	48.39	47.19
TraesCSU01G108000.1	Wheat	plasma membrane	48.28	47.19
TraesCS6B01G065700.1	Wheat	plasma membrane	48.17	47.13
HORVU6Hr1G009520.1	Barley	plasma membrane	48.17	46.98
TraesCS6A01G049900.1	Wheat	plasma membrane	47.95	46.91
Os02t0117500-01	Rice	plasma membrane	48.95	46.82
TraesCSU01G107700.2	Wheat	plasma membrane	47.95	46.76
HORVU2Hr1G049510.4	Barley	plasma membrane	48.28	46.73
HORVU0Hr1G036590.3	Barley	plasma membrane	48.28	46.73
OQU84212	Sorghum	mitochondrion	46.62	46.31
Zm00001d054016_P004	Maize	plasma membrane	47.62	45.22
Zm00001d033769_P001	Maize	golgi, plasma membrane	30.45	43.58
AT2G32400.1	Thale cress	plasma membrane	42.86	42.02
AT2G29110.2	Thale cress	plasma membrane	32.23	30.7
AT2G29100.2	Thale cress	plasma membrane	31.89	30.57
AT2G24720.1	Thale cress	plasma membrane	30.9	30.33
AT4G31710.2	Thale cress	plasma membrane	30.23	29.93
AT5G27100.1	Thale cress	plasma membrane	29.46	29.52
AT2G24710.3	Thale cress	plasma membrane	30.01	29.49
AT2G29120.1	Thale cress	plasma membrane	31.01	29.41
AT5G11210.5	Thale cress	plasma membrane	29.68	29.19
AT5G11180.2	Thale cress	plasma membrane	29.9	27.92
AT5G48410.1	Thale cress	plasma membrane	25.03	26.28
Os02t0117600-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	EntrezGene:824311	ProteinID:AEE78797.1
InterPro:ANF_lig-bd_rcpt	ProteinID:ANM64330.1	ProteinID:ANM64332.1	ArrayExpress:AT3G51480	EnsemblPlantsGene:AT3G51480	RefSeq:AT3G51480
TAIR:AT3G51480	RefSeq:AT3G51480-TAIR-G	EnsemblPlants:AT3G51480.1	TAIR:AT3G51480.1	Symbol:ATGLR3.6	Unigene:At.35384
EMBL:BT004264	ProteinID:CAB63012.1	GO:GO:0003674	GO:GO:0004871	GO:GO:0004930	GO:GO:0004970
GO:GO:0005215	GO:GO:0005262	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007186	GO:GO:0007267	GO:GO:0008066	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009719	GO:GO:0009864	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0019722	GO:GO:0035235	GO:GO:0038023	GO:GO:0070588	GO:GO:0071230	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	RefSeq:NP_001326367.1	RefSeq:NP_001326369.1	RefSeq:NP_190716.3	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF13	InterPro:Peripla_BP_I	UniProt:Q84W41	SMART:SM00079
SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000000C30B
SEG:seg	:	:	:	:	:

Description

GLR3.6Glutamate receptor 3.6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W41]

Coordinates

chr3:+:19100676..19104844

Molecular Weight (calculated)

100536.0 Da

IEP (calculated)

7.805

GRAVY (calculated)

0.112

Length

903 amino acids

Sequence
(BLAST)

001: MKWFLLMLII CNAVPLQGLT KIVSARPQVV NIGSVFTFNS LIGKVIKVAM DAAVEDVNAS PSILNTTTLR IIMHDTKYNG FMSIMEPLQF MESETVAIIG
101: PQRSTTARVV AHVATELKIP ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA ALGDRLSEKR CRISYKAALP
201: PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN
301: LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG
401: TGYTTIGYWF NHSGLSVMPA DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI TGFCVDVFIA AINLLPYAVP
501: FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK
601: HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE
701: LNIHVSRLVP LRSPEEYDKA LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI LQLSENGDMQ RIRDKWLLRK
801: ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS
901: RCN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.