Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g01020.t01 | Wine grape | plasma membrane | 35.47 | 33.52 |
| AT2G29100.2 | Thale cress | plasma membrane | 33.72 | 30.79 |
| AT2G29110.2 | Thale cress | plasma membrane | 33.6 | 30.49 |
| AT5G27100.1 | Thale cress | plasma membrane | 31.63 | 30.19 |
| AT2G24720.1 | Thale cress | plasma membrane | 32.21 | 30.11 |
| AT5G11210.5 | Thale cress | plasma membrane | 31.98 | 29.96 |
| AT2G29120.1 | Thale cress | plasma membrane | 32.67 | 29.52 |
| AT2G24710.3 | Thale cress | plasma membrane | 31.51 | 29.49 |
| AT4G31710.2 | Thale cress | plasma membrane | 31.05 | 29.28 |
| AT5G11180.2 | Thale cress | plasma membrane | 32.21 | 28.65 |
| AT3G51480.1 | Thale cress | plasma membrane | 26.28 | 25.03 |
| AT2G32390.5 | Thale cress | plasma membrane | 27.67 | 24.97 |
| AT2G17260.1 | Thale cress | plasma membrane | 26.63 | 24.76 |
| AT1G05200.1 | Thale cress | plasma membrane | 27.33 | 24.5 |
| AT1G42540.2 | Thale cress | plasma membrane | 26.51 | 24.44 |
| AT4G35290.2 | Thale cress | plasma membrane | 25.58 | 24.12 |
| AT2G32400.1 | Thale cress | plasma membrane | 25.7 | 24.0 |
Protein Annotations
| Gene3D:1.10.287.70 | MapMan:24.3.9 | Gene3D:3.40.190.10 | Gene3D:3.40.50.2300 | EntrezGene:834896 | ProteinID:AED95667.1 |
| InterPro:ANF_lig-bd_rcpt | ArrayExpress:AT5G48410 | EnsemblPlantsGene:AT5G48410 | RefSeq:AT5G48410 | TAIR:AT5G48410 | RefSeq:AT5G48410-TAIR-G |
| EnsemblPlants:AT5G48410.1 | TAIR:AT5G48410.1 | Symbol:ATGLR1.3 | EMBL:AY091121 | EMBL:AY142599 | Unigene:At.66754 |
| ProteinID:BAA96961.2 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0004970 | GO:GO:0005215 | GO:GO:0005262 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006816 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008066 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019722 | GO:GO:0035235 | GO:GO:0038023 |
| GO:GO:0070588 | GO:GO:0071230 | InterPro:Iontro_rcpt | InterPro:Iontropic_Glu_rcpt_pln | RefSeq:NP_199652.1 | PFAM:PF00060 |
| PFAM:PF00497 | PFAM:PF01094 | PIRSF:PIRSF037090 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43891 | PANTHER:PTHR43891:SF3 | InterPro:Peripla_BP_I |
| UniProt:Q9FH75 | SMART:SM00079 | SUPFAM:SSF53822 | SUPFAM:SSF53850 | SignalP:SignalP-noTM | InterPro:Solute-binding_3/MltF_N |
| TMHMM:TMhelix | UniParc:UPI0000048C2A | SEG:seg | : | : | : |
Description
GLR1.3Glutamate receptor 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH75]
Coordinates
chr5:+:19620267..19623425
Molecular Weight (calculated)
97030.0 Da
IEP (calculated)
7.396
GRAVY (calculated)
0.022
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MERFCIQTQT LLSFLLVLLL FISRSFASTK NDDVDGGKRV QIRVGLVLDL GSLKGKIVKN SVSMALSYFY AIHNDYKTRV SVSLRNSHGE PLLALASAVD
101: LLKTEGVEAI IGGNSLLEAK LLGELGEKAR VPMISLDSPF SLSLSKYTHL IQATHDSTSE AKGITSFINV FDWNSVALVY EDHDDWRESM QLLVEHFHEN
201: GVRVQSKVGF TVSSSEDFVM GRLQQLKDLG TTVFVVHLSE VIATHLFPCA RRLGLMGDGF VWILTAKTMN SFHENIDDFT KQAMEGVVGF KSYIPMSIEL
301: QNFTLRWRKS LPVEEAELTR LSISGIWAHD IAFALARAAE VIRMPNVTST LLEEITKTRF NGLSGDFQLN DKKLLSNKFE IINMIGSSER RVGFLNSNGS
401: FSNRRHLSST HNKLETIIWP GGSAQSPKGT SLIDSDRKKL RVLVTSSNRF PRLMKVETDP VTNELIVEGF CIEVFRASIS PFNYEVEYIP WLNGSNYDNL
501: AYALHSQKDK YDAAVGDITI TSNRSTYVDF TLPFTEMGLG IVAVKERSMW VFFQPLTPDL WITSAFFFVL TGVIVWLIER AENKEFQGSW PQQIGVVLWF
601: GFSTLVYAHR EKLKHNLSRF VVTVWVFAVL ILTASYTATL TSMMTVQQIR FNSNEDYVGH LSGSLIANVA LTSSSLRAMR SLGLNSAADY AQALLNKTVS
701: FVVDELPYLK VVLGENPTHF FMVKTQSTTN GFGFMFQKGF ELVPNVSREI SKLRTSEKLN EMEKRWFDNQ LPYTTDDTSN PITLYRFRGL FIIIGVSFAF
801: ALAVLVILCL RDKWEILVDN LDLSQRLRHF RIHFVRSIHT SPLDDPIGET AVQMAQQNRQ
101: LLKTEGVEAI IGGNSLLEAK LLGELGEKAR VPMISLDSPF SLSLSKYTHL IQATHDSTSE AKGITSFINV FDWNSVALVY EDHDDWRESM QLLVEHFHEN
201: GVRVQSKVGF TVSSSEDFVM GRLQQLKDLG TTVFVVHLSE VIATHLFPCA RRLGLMGDGF VWILTAKTMN SFHENIDDFT KQAMEGVVGF KSYIPMSIEL
301: QNFTLRWRKS LPVEEAELTR LSISGIWAHD IAFALARAAE VIRMPNVTST LLEEITKTRF NGLSGDFQLN DKKLLSNKFE IINMIGSSER RVGFLNSNGS
401: FSNRRHLSST HNKLETIIWP GGSAQSPKGT SLIDSDRKKL RVLVTSSNRF PRLMKVETDP VTNELIVEGF CIEVFRASIS PFNYEVEYIP WLNGSNYDNL
501: AYALHSQKDK YDAAVGDITI TSNRSTYVDF TLPFTEMGLG IVAVKERSMW VFFQPLTPDL WITSAFFFVL TGVIVWLIER AENKEFQGSW PQQIGVVLWF
601: GFSTLVYAHR EKLKHNLSRF VVTVWVFAVL ILTASYTATL TSMMTVQQIR FNSNEDYVGH LSGSLIANVA LTSSSLRAMR SLGLNSAADY AQALLNKTVS
701: FVVDELPYLK VVLGENPTHF FMVKTQSTTN GFGFMFQKGF ELVPNVSREI SKLRTSEKLN EMEKRWFDNQ LPYTTDDTSN PITLYRFRGL FIIIGVSFAF
801: ALAVLVILCL RDKWEILVDN LDLSQRLRHF RIHFVRSIHT SPLDDPIGET AVQMAQQNRQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.