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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80728 Canola cytosol 29.44 100.0
AT1G42540.2 Thale cress plasma membrane 90.88 80.06
CDY70557 Canola extracellular, plasma membrane 51.82 79.92
CDY68928 Canola extracellular, plasma membrane 51.58 79.55
Solyc04g082610.2.1 Tomato plasma membrane 66.79 59.16
PGSC0003DMT400025675 Potato plasma membrane 66.55 58.75
VIT_18s0122g00990.t01 Wine grape plasma membrane 65.94 58.03
KRH60898 Soybean plasma membrane 63.87 56.76
CDY71348 Canola golgi, plasma membrane 18.13 56.23
KRH51581 Soybean plasma membrane 63.5 56.19
CDX75491 Canola cytosol, plasma membrane, plastid 13.38 53.92
GSMUA_Achr9P23900_001 Banana plasma membrane 59.61 53.38
GSMUA_Achr3P27050_001 Banana plasma membrane 59.25 53.22
CDX95758 Canola cytosol 26.28 53.07
GSMUA_Achr5P19180_001 Banana plasma membrane 58.03 53.0
HORVU0Hr1G018770.1 Barley plasma membrane 51.58 52.8
CDX73718 Canola plasma membrane 57.18 52.75
CDX78008 Canola plasma membrane 56.81 52.41
CDY06165 Canola plasma membrane 54.01 50.98
CDX69127 Canola plasma membrane 55.6 50.11
CDY24327 Canola plasma membrane 54.99 49.56
CDY52597 Canola plasma membrane 54.5 49.12
Zm00001d015007_P003 Maize plasma membrane 53.53 48.83
CDX76331 Canola plasma membrane 54.01 48.79
KXG29299 Sorghum plasma membrane 54.14 48.06
TraesCSU01G108800.1 Wheat plasma membrane 53.89 48.0
TraesCS2A01G455200.2 Wheat plasma membrane 53.65 47.99
CDY65624 Canola plasma membrane 50.73 47.93
TraesCS6B01G066200.1 Wheat plasma membrane 53.65 47.88
TraesCS2B01G477300.4 Wheat plasma membrane 53.53 47.88
TraesCS2D01G455600.2 Wheat plasma membrane 53.41 47.77
CDY10044 Canola plasma membrane 54.26 47.5
Zm00001d002532_P003 Maize plasma membrane 53.65 47.37
TraesCSU01G108000.1 Wheat plasma membrane 53.16 47.29
TraesCS6A01G049900.1 Wheat plasma membrane 53.04 47.24
TraesCSU01G107900.1 Wheat plasma membrane 53.16 47.19
TraesCS6A01G048700.1 Wheat plasma membrane 53.16 47.19
HORVU2Hr1G049510.4 Barley plasma membrane 53.53 47.16
HORVU0Hr1G036590.3 Barley plasma membrane 53.53 47.16
TraesCS6B01G065500.1 Wheat plasma membrane 53.04 47.08
HORVU6Hr1G009520.1 Barley plasma membrane 53.04 47.08
TraesCS6A01G048800.1 Wheat plasma membrane 53.04 47.08
KXG26996 Sorghum plasma membrane 53.53 47.06
HORVU2Hr1G104920.3 Barley plasma membrane 54.38 47.05
TraesCS6B01G065700.1 Wheat plasma membrane 52.68 46.91
TraesCS6B01G065400.1 Wheat plasma membrane 52.8 46.87
TraesCS6A01G049000.1 Wheat plasma membrane 52.92 46.72
CDY46839 Canola plasma membrane 54.01 46.69
TraesCSU01G107700.2 Wheat plasma membrane 52.55 46.65
Os02t0117500-01 Rice plasma membrane 53.41 46.5
OQU84212 Sorghum mitochondrion 51.22 46.31
CDY49512 Canola plasma membrane 53.65 46.27
Zm00001d054016_P004 Maize plasma membrane 53.04 45.85
Zm00001d033769_P001 Maize golgi, plasma membrane 32.24 42.0
Os04t0585200-02 Rice extracellular 25.91 39.44
CDY66698 Canola plasma membrane 41.85 38.7
CDY15337 Canola plasma membrane 41.73 38.37
CDY12211 Canola plasma membrane 41.36 38.25
CDY48270 Canola plasma membrane 42.82 38.18
CDX84735 Canola plasma membrane 41.24 38.18
CDX75490 Canola extracellular, plasma membrane, vacuole 27.01 38.14
CDY12210 Canola plasma membrane 42.46 37.89
CDY66699 Canola plasma membrane 41.97 37.26
CDX84734 Canola plasma membrane 41.85 37.15
CDY48271 Canola plastid 32.12 35.72
CDY31759 Canola cytosol, peroxisome, plasma membrane 19.83 34.61
CDY70035 Canola cytosol, plasma membrane 32.85 33.37
CDX72325 Canola plasma membrane 26.76 32.64
CDY58212 Canola cytosol, plasma membrane 33.09 32.61
CDY31756 Canola cytosol, peroxisome, plastid 32.36 30.65
CDY36173 Canola plasma membrane 28.95 29.53
CDY31755 Canola cytosol 33.09 29.47
CDY00544 Canola plasma membrane 27.49 29.01
CDY50141 Canola plasma membrane 18.49 28.68
CDY45595 Canola plasma membrane 29.32 28.02
CDY54213 Canola plasma membrane 30.29 28.01
CDX85724 Canola plasma membrane 29.2 27.94
CDY51113 Canola plasma membrane 29.2 27.94
CDY38574 Canola plasma membrane 32.48 27.61
CDY39533 Canola plasma membrane 32.6 27.6
CDY56837 Canola plasma membrane 30.66 27.45
CDX73196 Canola cytosol, peroxisome, plasma membrane 29.81 26.83
CDY68132 Canola plasma membrane 30.41 24.78
CDY13449 Canola cytosol 28.71 24.61
CDY63640 Canola cytosol 15.33 23.2
Os02t0117600-01 Rice plastid 0.12 0.41
CDY72467 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078HD90UniProt:A0A078HD90
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY35797ProteinID:CDY35797ProteinID:CDY35797.1GO:GO:0003674GO:GO:0004871
GO:GO:0004930GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811
GO:GO:0007154GO:GO:0007165GO:GO:0007186GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:GPCR_3EnsemblPlantsGene:GSBRNA2T00059294001InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR00248
PANTHER:PTHR43891PANTHER:PTHR43891:SF8InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EF4267SEG:seg::
Description
BnaA08g04580DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078HD90]
Coordinates
chrLK032361:+:305473..308405
Molecular Weight (calculated)
92330.5 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.055
Length
822 amino acids
Sequence
(BLAST)
001: MISHMANELR VPLLSFAVTD PVMSPLQFPY FIRTSQSDLY QMEAIASIVD LYGWKEVIAV FVDDDYGRNG VAALNDKLAS RRLRITYKAG LHPDNAVNKN
101: EIMNMLIKIM LLQPRIIVIH VYSELGFAVF KEAKYLGMMG NGYVWIATDW LSTTLDSSSP LPSERLESIQ GALVLRPHTP DSKLKREFFA RWRKNPDAPL
201: ALHTYGLYAY DSVMLLARAL DKYFKHGGKI SFSNDSMLDA LGKSGSLNLE AMTVFDGGEA LLKDILGTHM VGLTGQLQFT TDRSRIRPAY DIINVAGTGV
301: RQIGYWSNHS GLSVLPPESL TKPNMSASQK LRHVIWPGEA FQKPRGWAFS NNGKELKIGV PRRVSYKEFV SQIRGTEYMF KGFCIDVFTA AVNLLPYAVP
401: VKFIPYGNGK ENPSYTHMVE MITSGNFDGV VGDIAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTACCFLFV GIVVWILEHR
501: INDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIDSLRE MDDRIGYQVG SFAERYLRDE
601: LNISESRLVP LGSPEAYAKA LKDGPRKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ RIHDKWLMKN
701: ACTLENAELE SDRLHLKSFW GLFLICGVAC VLALFLYFVQ IIRQLYNGKP SEEEEDAIGR ENHDSSSLRS TRLQRFLSLM DEKEDVSKAG SKKRKIDGSV
801: NDNSVSRHSR RLDSFNSVNP LD
Best Arabidopsis Sequence Match ( AT1G42540.2 )
(BLAST)
001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD
Arabidopsis Description
GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.