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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005589.1-P Field mustard plasma membrane 91.07 71.22
CDY66698 Canola plasma membrane 84.98 70.64
CDX84735 Canola plasma membrane 84.84 70.61
CDY12211 Canola plasma membrane 83.49 69.4
AT2G32390.5 Thale cress plasma membrane 81.46 63.17
CDY49512 Canola plasma membrane 69.96 54.25
CDY46839 Canola plasma membrane 69.55 54.05
CDY10044 Canola plasma membrane 68.61 53.99
CDY06165 Canola plasma membrane 62.92 53.39
VIT_12s0059g02270.t01 Wine grape plasma membrane 58.32 46.65
CDX75491 Canola cytosol, plasma membrane, plastid 12.72 46.08
Solyc05g045650.2.1 Tomato plasma membrane 54.53 45.95
PGSC0003DMT400065539 Potato plasma membrane 57.1 44.85
PGSC0003DMT400013497 Potato plasma membrane 56.83 44.26
KRH26793 Soybean plasma membrane 56.7 44.24
KRH22559 Soybean plasma membrane 56.43 44.03
KRH25388 Soybean plasma membrane 54.26 43.4
Solyc07g052400.2.1 Tomato cytosol 47.5 43.28
KRH56121 Soybean plasma membrane 53.99 42.95
GSMUA_Achr9P11690_001 Banana plasma membrane 50.47 41.77
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 50.61 41.6
GSMUA_Achr9P02750_001 Banana plasma membrane 49.39 39.8
CDX80728 Canola cytosol 12.99 39.67
GSMUA_Achr6P00460_001 Banana plasma membrane 48.58 38.81
CDY71348 Canola golgi, plasma membrane 13.8 38.49
EER90229 Sorghum plasma membrane 47.9 38.23
HORVU1Hr1G086120.3 Barley plasma membrane 48.17 38.16
Zm00001d014458_P001 Maize plasma membrane 47.36 38.04
EER97313 Sorghum plasma membrane 47.36 37.88
TraesCS1A01G390300.2 Wheat plasma membrane 48.04 37.85
TraesCS1D01G398500.1 Wheat plasma membrane 47.9 37.82
TraesCS2D01G265700.1 Wheat plasma membrane 47.23 37.69
TraesCS2B01G285400.1 Wheat plasma membrane 47.23 37.61
TraesCS2A01G257200.1 Wheat plasma membrane 47.23 37.57
Zm00001d006508_P003 Maize plasma membrane 46.82 37.49
TraesCS2B01G246200.1 Wheat plasma membrane 45.33 37.39
Zm00001d014451_P001 Maize plasma membrane 47.9 37.38
TraesCS1B01G418500.1 Wheat plasma membrane 47.36 37.35
TraesCS7A01G455200.1 Wheat plasma membrane 47.09 37.26
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 47.09 37.22
KXG20640 Sorghum plasma membrane 46.68 37.1
TraesCS7B01G355500.1 Wheat plasma membrane 46.68 36.9
KXG20638 Sorghum plasma membrane 47.9 36.88
HORVU2Hr1G045730.6 Barley plasma membrane 46.01 36.72
TraesCS2A01G220700.1 Wheat plasma membrane 46.01 36.64
TraesCS2D01G226400.1 Wheat plasma membrane 45.87 36.61
Zm00001d014456_P001 Maize plasma membrane 45.74 36.54
Os06t0680500-01 Rice cytosol, plasma membrane 43.57 36.18
TraesCS7D01G444100.2 Wheat plasma membrane 47.09 36.02
Os07t0103100-01 Rice plasma membrane 46.01 35.56
CDX73718 Canola plasma membrane 42.76 35.47
CDX78008 Canola plasma membrane 42.76 35.47
EER95720 Sorghum plastid 46.41 35.25
Zm00001d018614_P003 Maize plastid 45.47 35.04
Zm00001d018615_P001 Maize plasma membrane 44.38 34.17
CDY24327 Canola plasma membrane 41.81 33.88
CDY65624 Canola plasma membrane 39.65 33.68
CDY52597 Canola plasma membrane 41.41 33.55
CDX69127 Canola plasma membrane 40.19 32.57
CDX76331 Canola plasma membrane 40.05 32.53
CDY35797 Canola plasma membrane 35.72 32.12
CDY68928 Canola extracellular, plasma membrane 22.87 31.71
EER95721 Sorghum plastid 42.08 31.7
CDY70557 Canola extracellular, plasma membrane 22.6 31.33
CDY15337 Canola plasma membrane 37.62 31.1
CDX84734 Canola plasma membrane 38.3 30.56
CDY12210 Canola plasma membrane 38.02 30.51
CDY48270 Canola plasma membrane 38.02 30.48
CDY66699 Canola plasma membrane 37.62 30.02
CDX75490 Canola extracellular, plasma membrane, vacuole 22.33 28.35
CDX95758 Canola cytosol 13.4 24.32
CDY31759 Canola cytosol, peroxisome, plasma membrane 13.26 20.81
CDY54213 Canola plasma membrane 24.49 20.36
CDY70035 Canola cytosol, plasma membrane 22.19 20.27
CDY31755 Canola cytosol 25.3 20.26
CDY36173 Canola plasma membrane 22.06 20.22
CDY39533 Canola plasma membrane 26.52 20.19
CDY58212 Canola cytosol, plasma membrane 22.73 20.14
CDY45595 Canola plasma membrane 23.27 20.0
CDY51113 Canola plasma membrane 23.0 19.79
CDY31756 Canola cytosol, peroxisome, plastid 23.14 19.7
CDX85724 Canola plasma membrane 22.87 19.67
GSMUA_Achr5P00750_001 Banana mitochondrion 49.39 19.5
CDY38574 Canola plasma membrane 25.3 19.34
CDY50141 Canola plasma membrane 13.8 19.25
CDY56837 Canola plasma membrane 23.82 19.17
CDX73196 Canola cytosol, peroxisome, plasma membrane 23.68 19.17
CDX72325 Canola plasma membrane 17.46 19.14
CDY00544 Canola plasma membrane 20.16 19.13
CDY68132 Canola plasma membrane 25.03 18.34
CDY13449 Canola cytosol 21.79 16.79
CDY63640 Canola cytosol 11.23 15.29
CDY72467 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078IE46UniProt:A0A078IE46
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY48271ProteinID:CDY48271ProteinID:CDY48271.1GO:GO:0003674GO:GO:0004871
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235
GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00089142001InterPro:Iontro_rcptPFAM:PF00497PFAM:PF01094PRINTS:PR01176
PANTHER:PTHR43891PANTHER:PTHR43891:SF12InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EEA232SEG:seg:
Description
BnaA05g10830DBnaA05g10830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IE46]
Coordinates
chrLK032763:+:51849..55182
Molecular Weight (calculated)
81895.7 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.055
Length
739 amino acids
Sequence
(BLAST)
001: MELLVVIRAV SMGFVLLCAG RESFSRNSSS SSRPRSVNVG ALFTYDSFIG RAAKPALMAA IDDVNADQSI LRRTKLNIVF HDSNCSGFVG TMGALQVMEN
101: KVVAAIGPQS SGIGHIISHV ANELHVPLLS FAATDPTLSS LQFPYFLRTT QNDYFQMNAI ADFVSYFRWR EVVAIFVDDE YGRNGISVLG DALAKKRAKI
201: SYKAAFKPGA DNSSITDLLA SVNLLESRIF VVHVNPDSGL NIFSAAKSLG MMGSGYVWIA TDWLLTALDS VETVDPKTMD LLQGVVAFRH YTPESNNKTR
301: FKGRWKNLIS KESSGGDDDG FNSYAMYAYD TVWLVARALE VFFSEGNTVT FSSDPNLRKT NDSNIKLSAL NVFKEGERFL QRNPSYDNLI SEVAANNFDV
401: AVGDVTIVTN RTKFVDFTQP FMESGLVVPS FGFSNTALMK SFADLLGVKS SPFSGLASQP CSSLRVCTWS LQNIKLSFLI FRGEHGEYAG ELTSRIEGMD
501: SLIASNEPIG VQDGAFAYKY LVNELNIPPS RIIALKDEEE YLSALQLGPR AGGVAAIVDE LPYIKALLSN SNCKFRTVGP EFTRTGWGFA FQRDSPLAVD
601: MSTAILQLSE EGKLENIRKK WLTYSHECLM QIADKENYQI SVQSFWGLFL ICGIVWFIVL TLFCWKVFWQ CERLRTEEEG DEVRVSEEAS SSRSGRSLRA
701: ASFKDLIKVV DKREAEIKEM LKQKSSKKLK TSQSLGETP
Best Arabidopsis Sequence Match ( AT2G32390.3 )
(BLAST)
001: MGFFVMIRDV SMGFMLLCIS ALWVLPIQGA GRESFSRNSS SSSLPSSVNV GALFTYDSFI GRAAKLAFVA AIEDINADQS ILRGTKLNIV FQDTNCSGFV
101: GTMGALQLME NKVVAAIGPQ SSGIGHIISH VANELHVPFL SFAATDPTLS SLQYPYFLRT TQNDYFQMNA ITDFVSYFRW REVVAIFVDD EYGRNGISVL
201: GDALAKKRAK ISYKAAFPPG ADNSSISDLL ASVNLMESRI FVVHVNPDSG LNIFSVAKSL GMMGSGYVWI TTDWLLTALD SMEPLDPRAL DLLQGVVAFR
301: HYTPESDNKR QFKGRWKNLR FKESLKSDDG FNSYALYAYD SVWLVARALD VFFSQGNTVT FSNDPSLRNT NDSGIKLSKL HIFNEGERFL QVILEMNYTG
401: LTGQIEFNSE KNRINPAYDI LNIKSTGPLR VGYWSNHTGF SVAPPETLYS KPSNTSAKDQ RLNEIIWPGE VIKPPRGWVF PENGKPLKIG VPNRVSYKNY
501: ASKDKNPLGV KGFCIDIFEA AIQLLPYPVP RTYILYGDGK KNPSYDNLIS EVAANIFDVA VGDVTIITNR TKFVDFTQPF IESGLVVVAP VKGAKSSPWS
601: FLKPFTIEMW AVTGALFLFV GAVIWILEHR FNEEFRGPPR RQIITVFWFS FSTMFFSHSM HTITFKIIRK HQREETLGSF LLLPRSQGVL FFFLC
Arabidopsis Description
GLR3.5Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.