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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, peroxisome, secretory
iPSORT:secretory
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G355500.1 Wheat plasma membrane 99.04 98.93
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 96.47 96.36
TraesCS7D01G444100.2 Wheat plasma membrane 99.25 95.96
Os06t0680500-01 Rice cytosol, plasma membrane 75.91 79.66
TraesCS1A01G390300.2 Wheat plasma membrane 78.16 77.83
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 62.63 65.07
VIT_12s0059g02270.t01 Wine grape plasma membrane 58.57 59.2
Solyc05g045650.2.1 Tomato plasma membrane 55.35 58.95
TraesCS2A01G257200.1 Wheat plasma membrane 57.82 58.13
Solyc07g052400.2.1 Tomato cytosol 50.21 57.83
TraesCS2A01G220700.1 Wheat plasma membrane 56.96 57.33
KRH25388 Soybean plasma membrane 56.21 56.82
KRH56121 Soybean plasma membrane 56.42 56.73
CDY06165 Canola plasma membrane 52.68 56.49
PGSC0003DMT400065539 Potato plasma membrane 56.75 56.32
KRH26793 Soybean plasma membrane 57.07 56.28
KRH22559 Soybean plasma membrane 56.96 56.18
PGSC0003DMT400013497 Potato plasma membrane 56.64 55.74
CDY46839 Canola plasma membrane 55.78 54.78
AT2G32390.5 Thale cress plasma membrane 55.89 54.77
CDY10044 Canola plasma membrane 55.03 54.74
Bra015398.1-P Field mustard plasma membrane 55.67 54.68
CDY49512 Canola plasma membrane 55.67 54.56
AT1G05200.1 Thale cress plasma membrane 55.78 54.33
Bra032480.1-P Field mustard plasma membrane 54.6 53.07
Bra005589.1-P Field mustard plasma membrane 53.21 52.59
TraesCS2A01G455200.2 Wheat plasma membrane 49.79 50.6
TraesCS6A01G049900.1 Wheat plasma membrane 49.46 50.05
TraesCS6A01G049000.1 Wheat plasma membrane 48.93 49.09
TraesCS6A01G048800.1 Wheat plasma membrane 48.61 49.03
TraesCS6A01G048700.1 Wheat plasma membrane 48.61 49.03
CDY48271 Canola plastid 37.26 47.09
CDY66698 Canola plasma membrane 44.54 46.79
CDX84735 Canola plasma membrane 44.11 46.4
CDY12211 Canola plasma membrane 42.29 44.43
TraesCS5A01G218900.1 Wheat plasma membrane 26.87 32.35
GSMUA_Achr5P00750_001 Banana mitochondrion 63.7 31.78
TraesCS7A01G341200.1 Wheat plasma membrane 30.19 31.51
TraesCS5A01G219800.1 Wheat plasma membrane 30.84 31.14
TraesCS5A01G218400.1 Wheat plasma membrane 30.62 30.89
TraesCS3A01G023600.2 Wheat plasma membrane 29.12 30.16
TraesCS5A01G042800.1 Wheat plasma membrane 28.8 29.96
TraesCS5A01G218300.1 Wheat plasma membrane 30.51 29.87
TraesCS6A01G347900.1 Wheat plasma membrane 32.12 29.76
TraesCS5A01G218600.1 Wheat plasma membrane 28.91 29.57
TraesCS5A01G218700.1 Wheat plasma membrane 28.8 29.33
TraesCS6A01G347400.1 Wheat plastid 32.55 29.23
TraesCS5A01G218000.1 Wheat plasma membrane 30.41 28.98
TraesCS5A01G218200.1 Wheat plasma membrane 29.98 28.9
TraesCS7A01G154100.1 Wheat plasma membrane 26.34 26.28
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 19.59 25.1
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS7A01G455200EnsemblPlants:TraesCS7A01G455200.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr7A:+:650622627..650628065
Molecular Weight (calculated)
102224.0 Da
IEP (calculated)
7.337
GRAVY (calculated)
0.068
Length
934 amino acids
Sequence
(BLAST)
001: MGAGRLLVLC LALCVAAAAA QRPNRRPRAV SVGALFTYES TIGRAARLAI ELAVDDVNAD RTVLAGTTLN LISQDTNCSG FLGTIEALQL MEKNVVAVIG
101: PQSSGIGHVI SHVVNELHVP LLSFAATDPT LSASEYPYFL RSTISDYFQM HAVASIIDYF QWKEVTAIFV DDDYGRGGVS VLGDALGAKR ARISHKAAIP
201: PNSDTDLIND VLFRANMMES RVFVVHVNPD AGMRIFAIAN KLQMMGTGYV WIVTDWLAAV LDSSGPGDPK AMSYIQGLIV LRQHTPDSDA KRKFVAKWNN
301: AANNRSIASG MNSYGFYAYD SVWVVARAIN EYLNSGQQIT FSADPRLHNS NGSSLRLSKL KIFDGGDQLL QQLLLTNMTG LTGLVQFNAD RNLVRPAYDI
401: LNVGGTGSRL IGYWSNYSGL SVSAPEILYR KPPNTSTSAQ QLHSVVWPGD TTTKPRGWVF PNNGQPLRVG VPNKPSFREL VSVGKGPDNV TGYSVDIFNA
501: AIKLLPYPVP CQFITIGDGS KNPNYDDIIS RIATNALDAA VGDFAIVRNR TKIAEFTQPY IEAGLVIVAP VRKANSNAWA FFKPFTLEMW CVTGTLFIFV
601: GVVVWILEHR TNEEFRGSPR RQILTIFWFS FSTMFFAHRE NTVSALGRFV LIIWLFVVLI INSSYTASLT SILTVQQLAT GITGLDNLVA SALPIGYPAG
701: KFVRNYLIDE LNIPESRLVP LSTVEEYANA LNRGPKDGGV AAVVDEMPCV EIFLSTHCNF RIVGQEFTKE GWGFAFQRDS PLAADLSTAI LQLSESGQLQ
801: RIHDEWLTDP TCGDDDSGLG AVRLGLGSFW GLFLLCALIC VFALMVYFAR ICWQYSRYSS SEPPSEPSDS AAAVTAATIA QIRPEKPKPT RLGSFKELIQ
901: FADTKEEEIK KVMKRRLSEK DTRATGSAHS VSSA
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.