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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G455200.1 Wheat plasma membrane 98.93 99.04
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 95.61 95.61
TraesCS7D01G444100.2 Wheat plasma membrane 98.5 95.34
Os06t0680500-01 Rice cytosol, plasma membrane 75.4 79.21
TraesCS1B01G418500.1 Wheat plasma membrane 77.33 77.16
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 62.14 64.63
VIT_12s0059g02270.t01 Wine grape plasma membrane 58.18 58.87
Solyc05g045650.2.1 Tomato plasma membrane 54.97 58.61
TraesCS2B01G285400.1 Wheat plasma membrane 57.75 58.19
Solyc07g052400.2.1 Tomato cytosol 50.05 57.71
TraesCS2B01G246200.1 Wheat plasma membrane 54.87 57.25
KRH25388 Soybean plasma membrane 55.72 56.39
KRH56121 Soybean plasma membrane 55.94 56.3
CDY06165 Canola plasma membrane 52.3 56.14
PGSC0003DMT400065539 Potato plasma membrane 56.36 56.0
KRH22559 Soybean plasma membrane 56.68 55.97
KRH26793 Soybean plasma membrane 56.68 55.97
PGSC0003DMT400013497 Potato plasma membrane 56.26 55.43
AT2G32390.5 Thale cress plasma membrane 55.51 54.46
CDY10044 Canola plasma membrane 54.65 54.42
CDY46839 Canola plasma membrane 55.29 54.36
Bra015398.1-P Field mustard plasma membrane 55.19 54.26
CDY49512 Canola plasma membrane 55.19 54.14
AT1G05200.1 Thale cress plasma membrane 55.4 54.01
Bra032480.1-P Field mustard plasma membrane 54.22 52.76
Bra005589.1-P Field mustard plasma membrane 52.83 52.28
TraesCS6B01G066200.1 Wheat plasma membrane 49.41 50.16
TraesCS2B01G477300.4 Wheat plasma membrane 48.98 49.84
TraesCS6B01G065500.1 Wheat plasma membrane 48.88 49.35
TraesCS6B01G065700.1 Wheat plasma membrane 48.45 49.08
TraesCS6B01G065400.1 Wheat plasma membrane 48.13 48.6
CDY48271 Canola plastid 36.9 46.68
CDY66698 Canola plasma membrane 44.17 46.46
CDX84735 Canola plasma membrane 43.74 46.06
CDY12211 Canola plasma membrane 42.14 44.32
TraesCS7B01G242400.1 Wheat plasma membrane 31.12 32.15
GSMUA_Achr5P00750_001 Banana mitochondrion 63.42 31.68
TraesCS5B01G218700.1 Wheat plasma membrane 30.59 30.65
TraesCS5B01G217000.1 Wheat mitochondrion, plasma membrane 29.09 30.43
TraesCS5B01G218900.1 Wheat plasma membrane 30.16 29.81
TraesCS5B01G217500.1 Wheat plasma membrane 30.27 29.73
TraesCS6B01G380800.1 Wheat plasma membrane 32.3 29.55
TraesCS6B01G438400.1 Wheat plasma membrane 28.45 29.52
TraesCS6B01G381400.1 Wheat plasma membrane 31.98 29.49
TraesCS7B01G057800.1 Wheat plasma membrane 27.7 29.43
TraesCS5B01G217800.1 Wheat plasma membrane 26.74 29.34
TraesCS5B01G046400.1 Wheat plasma membrane 28.02 29.18
TraesCS5B01G217700.1 Wheat plasma membrane 28.45 29.13
TraesCS5B01G217100.1 Wheat plasma membrane 28.88 28.85
TraesCS5B01G257800.1 Wheat plasma membrane 27.81 28.79
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 29.95 28.63
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 29.95 28.25
TraesCS6B01G380900.1 Wheat plasma membrane 28.56 27.73
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS7B01G355500EnsemblPlants:TraesCS7B01G355500.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr7B:+:614868442..614874180
Molecular Weight (calculated)
102342.0 Da
IEP (calculated)
7.163
GRAVY (calculated)
0.075
Length
935 amino acids
Sequence
(BLAST)
001: MGAGRLLVLW LALCAAAAAA AQRANRRPRA VSVGALFTYE STIGRAARLA IELAVDDVNA DPTVLAGTTL NLISQDTNCS GFLGTIESLL LMEKNVVAVI
101: GPQSSGIGHV ISHVVNELHV PLLSFAATDP TLSASEYPYF LRSTISDYFQ MHAVASIIDY FQWKEVTAIF VDDDYGRGGV SVLGDALGAK RARISHKAAI
201: PPNSDTDLIN DVLFRANMME SRVFVVHVNP DAGMRIFAIA NKLQMMGTGY VWIVTDWLAA VLDSSGPGDP KAMSYIQGLI VLRQHTPDSD SKRKFVAKWN
301: NAANNRSIAS GMNSYGFYAY DSVWVVARAI NEYLNSGQQI TFSADPRLHN SNGSSLRLSK LKIFDCGDQL LQQLLLTNMT GLTGLVQFNA DRNLVRPAYD
401: ILNVGGTGSR LIGYWSNYSG LSVSAPEILY RKPPNTSTSA QQLHSVVWPG DTTTKPRGWV FPNNGQPLRV GVPNKPSFRE LVSVGKGPDN VTGYSVDIFN
501: AAIKLLPYPV PCQFITIGDG SKNPNYDDII SRIATNALDA ALGDFAIVRN RTKIAEFTQP YIEAGLVIVA PVRKANSNAW AFFKPFTLEM WCVTGTLFIF
601: VGVVVWILEH RTNEEFRGSP RRQILTIFWF SFSTMFFAHR ENTVSALGRF VLIIWLFVVL IINSSYTASL TSILTVQQLA TGITGLDNLV ASALPIGYPA
701: GKFVRNYLID ELNIPESRLV PLSTVEEYAN ALNRGPKDGG VAAVVDEMPC VEIFLSTHCN FRIVGQEFTK EGWGFAFQRD SPLAADLSTA ILQLSESGQL
801: QRIHDEWLTD PTCGDDDSGL GAVRLGLGSF WGLFLLCALI CVFALMVYFA RICWQYSRYS SSEPPSEPSD SAAAVTAATI AQIRPEKPKP TRLGSFKELI
901: QFADTKEEEI KKVMKRRLSE KDTRATGSAH SVSSA
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.