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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G455200.1 Wheat plasma membrane 95.96 99.25
TraesCS7B01G355500.1 Wheat plasma membrane 95.34 98.5
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 92.86 95.94
Os06t0680500-01 Rice cytosol, plasma membrane 73.19 79.44
TraesCS1D01G398500.1 Wheat plasma membrane 74.95 77.35
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 60.66 65.18
VIT_12s0059g02270.t01 Wine grape plasma membrane 56.63 59.2
Solyc05g045650.2.1 Tomato plasma membrane 53.52 58.95
TraesCS2D01G265700.1 Wheat plasma membrane 56.0 58.42
Solyc07g052400.2.1 Tomato cytosol 48.55 57.83
TraesCS2D01G226400.1 Wheat plasma membrane 55.28 57.67
KRH25388 Soybean plasma membrane 54.24 56.71
KRH56121 Soybean plasma membrane 54.45 56.62
CDY06165 Canola plasma membrane 50.93 56.49
PGSC0003DMT400065539 Potato plasma membrane 54.87 56.32
KRH22559 Soybean plasma membrane 55.18 56.28
KRH26793 Soybean plasma membrane 55.18 56.28
PGSC0003DMT400013497 Potato plasma membrane 54.97 55.95
CDY46839 Canola plasma membrane 53.93 54.78
AT2G32390.5 Thale cress plasma membrane 54.04 54.77
CDY10044 Canola plasma membrane 53.21 54.74
Bra015398.1-P Field mustard plasma membrane 53.83 54.68
CDY49512 Canola plasma membrane 53.83 54.56
AT1G05200.1 Thale cress plasma membrane 53.93 54.33
Bra032480.1-P Field mustard plasma membrane 52.8 53.07
Bra005589.1-P Field mustard plasma membrane 51.45 52.59
TraesCS2D01G455600.2 Wheat plasma membrane 47.93 50.38
CDY48271 Canola plastid 36.02 47.09
CDY66698 Canola plasma membrane 43.06 46.79
CDX84735 Canola plasma membrane 42.65 46.4
CDY12211 Canola plasma membrane 40.89 44.43
TraesCS2D01G025600.1 Wheat plasma membrane 22.36 33.13
TraesCS5D01G228000.1 Wheat plasma membrane 26.29 32.07
TraesCS5D01G226500.2 Wheat cytosol 28.99 31.96
GSMUA_Achr5P00750_001 Banana mitochondrion 61.59 31.78
TraesCS5D01G227800.1 Wheat plasma membrane 29.81 31.17
TraesCS5D01G225900.1 Wheat golgi 27.74 30.95
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 19.88 30.24
TraesCS6D01G330900.1 Wheat plasma membrane 31.37 30.06
TraesCS5D01G226400.1 Wheat plasma membrane 29.3 29.82
TraesCS6D01G330500.1 Wheat plasma membrane 30.95 29.4
TraesCS5D01G051300.1 Wheat golgi 27.23 29.25
TraesCS5D01G226300.1 Wheat plasma membrane 29.09 29.24
TraesCS5D01G226600.1 Wheat plasma membrane 27.95 29.06
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 29.5 29.02
TraesCS5D01G266800.1 Wheat plasma membrane 26.71 28.86
TraesCS5D01G226700.3 Wheat plasma membrane 27.33 28.79
TraesCS5D01G226000.1 Wheat plasma membrane 27.74 28.72
TraesCS5D01G226800.1 Wheat plasma membrane 27.85 28.26
TraesCS2D01G462300.1 Wheat plasma membrane 28.26 28.03
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS7D01G444100EnsemblPlants:TraesCS7D01G444100.2TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr7D:+:564967888..564973202
Molecular Weight (calculated)
105731.0 Da
IEP (calculated)
7.492
GRAVY (calculated)
0.086
Length
966 amino acids
Sequence
(BLAST)
001: MGAGRLLVLC LALCAAAAAA QRGIRRPRTV SVGALFTYES TIGRAARLAI ELAVDDVNAD RTVLAGTTLN LISQDTNCSG FLGTIEALQL MEKNVVAVIG
101: PQSSGIGHVI SHVVNELHVP LLSFAATDPT LSASEYPYFL RSTISDYFQM HAVASIIDYF QWKEVTAIFV DDDYGRGGVS VLGDALGAKR ARISHKAAIP
201: PNSDTDLIND VLFRANMMES RVFVVHVNPD AGMRIFAIAN KLQMMGTGYV WIVTDWLAAV LDSSGPGDPK AMSYIQGLIV LRQHTPDSDA KRKFVAKWNN
301: AANNRSIASG MNSYGFYAYD SVWVVARAIN EYLNSGQQIT FSADPRLHNS NGSSLRLSKL KIFDGGDQLL QQLLLTNMTG LTGLVQFNAD RNLVRPAYDI
401: LNVGGTGSRL IGYWSNYSGL SVSSPEILYR KPPNTSTSAQ QLHSVVWPGD TTTKPRGWVF PNNGQPLRVG VPNKPSFREL VSVGKGPDNV TGYSVDIFNA
501: AIKLLPYPVP CQFITIGDGS KNPNYDDIIS RIATNALDAA VGDFAIVRNR TKIAEFTQPY IEAGLVIVAP VRKANSNAWA FFKPFTLEMW CVTGTLFIFV
601: GVVVWILEHR SNEEFRGSPR RQILTIFWFS FSTMFFAHRE NTVSALGRFV LIIWLFVVLI INSSYTASLT SILTVQQLAT GITGLDNLVA SALPIGYPAG
701: KFVRNYLIDE LNIPESRLVP LSTVEEYANA LNRGPKDGGV AAVVDEMPCV EIFLSTHCNF RIVGQEFTKE GWGFVCSASN ESLCIYSYTF VKGRIISALF
801: FSPSLQAFQR DSPLAADLST AILQLSESGQ LQRIHDEWLT DPTCGDDDSG LGAVRLGLGS FWGLFLLCAL ICVFALMVYF ARICWQYSRY SSSEPPSEPS
901: DSAAAVTTAT IAQIRPEKPK PTRLGSFKEL IQFADTKEEE IKKVMKRRLS EKDTRATGSA HSVSSA
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.