Factsheet for TraesCS5D01G228000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G227800.1	Wheat	plasma membrane	79.67	68.29
TraesCS5B01G218900.1	Wheat	plasma membrane	81.19	67.97
EER98937	Sorghum	plasma membrane	72.47	60.74
Os09t0428600-00	Rice	plasma membrane	39.52	57.86
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	45.45	56.69
Os09t0428300-00	Rice	plasma membrane	60.23	54.7
TraesCS5D01G226700.3	Wheat	plasma membrane	60.73	52.45
TraesCS5D01G226600.1	Wheat	plasma membrane	60.1	51.24
TraesCS5D01G266800.1	Wheat	plasma membrane	57.45	50.89
TraesCS5D01G226500.2	Wheat	cytosol	56.19	50.8
TraesCS5D01G226800.1	Wheat	plasma membrane	60.61	50.42
Os09t0429000-00	Rice	plasma membrane	59.09	50.16
VIT_04s0069g00200.t01	Wine grape	cytosol	27.53	49.43
TraesCS5D01G051300.1	Wheat	golgi	54.8	48.28
VIT_04s0069g00380.t01	Wine grape	cytosol	24.62	47.56
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	32.2	45.95
GSMUA_Achr3P04970_001	Banana	plasma membrane	53.28	44.1
VIT_04s0069g00720.t01	Wine grape	cytosol	31.82	42.21
GSMUA_Achr9P13570_001	Banana	plasma membrane	47.47	41.23
VIT_04s0069g00560.t01	Wine grape	plasma membrane	45.58	40.29
VIT_04s0069g00540.t01	Wine grape	plasma membrane	35.73	40.03
VIT_04s0069g00670.t01	Wine grape	plasma membrane	44.82	38.63
VIT_04s0069g00170.t01	Wine grape	plasma membrane	44.95	38.44
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	39.65	37.92
VIT_04s0069g00620.t01	Wine grape	plasma membrane	46.34	37.07
Solyc08g006500.2.1	Tomato	extracellular	45.33	36.97
VIT_04s0069g00060.t01	Wine grape	plasma membrane	45.08	36.47
AT2G29110.2	Thale cress	plasma membrane	42.42	35.44
KRH50532	Soybean	plasma membrane	36.11	35.4
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	38.38	35.1
Bra040760.1-P	Field mustard	cytosol	37.25	35.04
AT2G29100.2	Thale cress	plasma membrane	41.67	35.03
Bra032072.1-P	Field mustard	plasma membrane	39.52	34.93
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.04	34.8
VIT_04s0069g00230.t01	Wine grape	plasma membrane	44.82	34.7
CDY00544	Canola	plasma membrane	34.09	34.66
KRH50533	Soybean	plasma membrane	34.85	34.41
CDY51113	Canola	plasma membrane	36.99	34.11
AT2G29120.1	Thale cress	plasma membrane	40.91	34.03
Bra023313.1-P	Field mustard	plasma membrane	36.87	33.99
Bra032063.1-P	Field mustard	plasma membrane	39.52	33.91
CDY31756	Canola	cytosol, peroxisome, plastid	37.12	33.87
TraesCS5D01G225900.1	Wheat	golgi	36.99	33.83
TraesCS5D01G226300.1	Wheat	plasma membrane	40.78	33.61
AT2G24720.1	Thale cress	plasma membrane	38.89	33.48
AT5G27100.1	Thale cress	plasma membrane	37.88	33.3
CDX85724	Canola	plasma membrane	36.11	33.29
CDY70035	Canola	cytosol, plasma membrane	33.96	33.25
CDY38574	Canola	plasma membrane	40.53	33.2
CDY54213	Canola	plasma membrane	37.25	33.18
CDY39533	Canola	plasma membrane	40.66	33.16
AT2G24710.3	Thale cress	plasma membrane	38.38	33.08
CDY31755	Canola	cytosol	38.51	33.04
CDY45595	Canola	plasma membrane	35.61	32.79
Bra040761.1-P	Field mustard	cytosol	38.51	32.76
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	40.53	32.69
CDY36173	Canola	plasma membrane	33.08	32.51
AT5G11210.5	Thale cress	plasma membrane	37.25	32.14
PGSC0003DMT400023744	Potato	cytosol	35.23	31.92
AT4G31710.2	Thale cress	plasma membrane	36.62	31.8
CDX73196	Canola	cytosol, peroxisome, plasma membrane	36.62	31.76
CDX72325	Canola	plasma membrane	27.02	31.75
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.48	31.37
CDY58212	Canola	cytosol, plasma membrane	32.83	31.18
TraesCS5D01G226000.1	Wheat	plasma membrane	36.49	30.98
AT5G11180.2	Thale cress	plasma membrane	37.75	30.92
TraesCS5D01G226400.1	Wheat	plasma membrane	36.87	30.77
CDY63640	Canola	cytosol	21.09	30.76
CDY56837	Canola	plasma membrane	35.61	30.72
TraesCS6D01G330900.1	Wheat	plasma membrane	38.89	30.56
TraesCS2D01G025600.1	Wheat	plasma membrane	25.13	30.52
Bra015817.1-P	Field mustard	plasma membrane	38.01	29.83
CDY68132	Canola	plasma membrane	38.01	29.83
TraesCS6D01G330500.1	Wheat	plasma membrane	38.13	29.7
TraesCS2D01G462300.1	Wheat	plasma membrane	36.36	29.57
TraesCS2D01G226400.1	Wheat	plasma membrane	34.22	29.27
CDY13449	Canola	cytosol	34.72	28.68
Bra023989.1-P	Field mustard	cytosol	35.61	28.63
CDY31759	Canola	cytosol, peroxisome, plasma membrane	16.92	28.45
CDY50141	Canola	plasma membrane	18.94	28.3
TraesCS2D01G265700.1	Wheat	plasma membrane	33.08	28.29
TraesCS1D01G398500.1	Wheat	plasma membrane	32.45	27.46
TraesCS7D01G444100.2	Wheat	plasma membrane	32.07	26.29
TraesCS2D01G455600.2	Wheat	plasma membrane	29.67	25.57
VIT_04s0069g00330.t01	Wine grape	plastid	44.57	20.06
Os09t0428750-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0038023	InterPro:GPCR_3	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PANTHER:PTHR43891	PANTHER:PTHR43891:SF11	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5D01G228000	EnsemblPlants:TraesCS5D01G228000.1	TIGR:cd06366	TIGR:cd13686	SEG:seg	:

Description

No Description!

Coordinates

chr5D:+:335215911..335220281

Molecular Weight (calculated)

88204.9 Da

IEP (calculated)

8.168

GRAVY (calculated)

0.089

Length

792 amino acids

Sequence
(BLAST)

001: MEIACRVILL LLLPLNFVVA QNASRAAQEL HVGVILDLET MVGKIARTSI SLAMEDFYAV HHNYSTKLVL HIRDSMRDDV RAASQAINLL EDYNVEAIIG
101: PQKSSQAVFI SKLGNRSHVP VISFTATSPS LSSKSLPYFV RATVNDSAQL NCIASIVKSY GWRKVVTIYE DTEYGRGIIP YLVDVLEDID AHVPYQSVLP
201: PSATSLQITL ELYKLMTMQT TVFVVHMSFT MASRVLIKAK DVGMMNKGYA WIMTDGVTNL IDSLNPSVLK SLSGILGVKF YVPKSTKLDD FTTRWNKRFQ
301: TDNPTDLPLK LSTFGMWSYD TIWVVAQAAE KVGLKNATFT KPGVTRNSTS LETLKTSSNG PKLLQEILQN QFEGLSGNFD LSDRQLQIST FQIINVIGKG
401: WREIGFWTAQ NGISQQLNKT KPATALSGSA HDLYPVIWPG ESTEVPRGSQ IPVSGKKLQV GVCTSGYPEF MKVEKDYITG ATKASGFSVD RSSEDYNDFV
501: YQVYLEIYDI AIGDITIRYN RTFYVDFTLP YTESGIAMIV PVRDSINRNT WIFLKPLAPG MWFGSVVFFI YTGVVVLILE FLGNNKNVRG PIPSQLGIMI
601: FFSIFEGKEL VQRFLSRIVL IVWLVFLMVL TSSYTVSLSS MLTVQQLQPT VTDVHELLKS GECVGYQHGS YVKGLLEELS FDRLKIKPYD PDDFHEALSR
701: GSNNGGIAAL VHEVPYIKLF LSNHCKGYTM VGPIYKAAGF GYVSLTTLDM LLSHYIPTEK VTITKSIGSQ KKVNSTSNHI NTSEHPILII LV

Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)

001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL

Arabidopsis Description

GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.