Factsheet for TraesCS5D01G266900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G072170.1	Barley	plasma membrane	85.83	68.3
TraesCS5D01G266800.1	Wheat	plasma membrane	82.05	58.28
TraesCS5D01G051300.1	Wheat	golgi	77.95	55.06
TraesCS5A01G259100.1	Wheat	cytosol, nucleus, plasma membrane	61.57	53.64
TraesCS5D01G226600.1	Wheat	plasma membrane	76.69	52.42
EER98936	Sorghum	plasma membrane	70.55	47.36
VIT_04s0069g00200.t01	Wine grape	cytosol	32.6	46.94
OQU89534	Sorghum	plasma membrane	67.09	46.76
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	40.47	46.31
TraesCS5D01G228000.1	Wheat	plasma membrane	56.69	45.45
VIT_04s0069g00380.t01	Wine grape	cytosol	29.29	45.37
VIT_04s0069g00720.t01	Wine grape	cytosol	39.37	41.88
TraesCS5D01G227800.1	Wheat	plasma membrane	60.63	41.67
TraesCS5D01G226700.3	Wheat	plasma membrane	58.58	40.57
TraesCS5D01G226800.1	Wheat	plasma membrane	59.06	39.39
VIT_04s0069g00540.t01	Wine grape	plasma membrane	43.78	39.32
TraesCS5D01G226500.2	Wheat	cytosol	52.44	38.01
GSMUA_Achr3P04970_001	Banana	plasma membrane	50.55	33.54
VIT_04s0069g00560.t01	Wine grape	plasma membrane	44.41	31.47
CDY63640	Canola	cytosol	26.77	31.31
VIT_04s0069g00170.t01	Wine grape	plasma membrane	45.2	30.99
GSMUA_Achr9P13570_001	Banana	plasma membrane	44.25	30.81
Bra032072.1-P	Field mustard	plasma membrane	42.52	30.13
VIT_04s0069g00670.t01	Wine grape	plasma membrane	43.15	29.82
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	38.58	29.59
CDY54213	Canola	plasma membrane	41.42	29.58
VIT_04s0069g00620.t01	Wine grape	plasma membrane	45.98	29.49
AT2G24720.1	Thale cress	plasma membrane	42.68	29.46
AT2G29110.2	Thale cress	plasma membrane	43.31	29.01
VIT_04s0069g00060.t01	Wine grape	plasma membrane	44.41	28.8
AT2G29100.2	Thale cress	plasma membrane	42.36	28.56
AT2G24710.3	Thale cress	plasma membrane	40.94	28.29
Solyc08g006500.2.1	Tomato	extracellular	43.15	28.22
AT5G27100.1	Thale cress	plasma membrane	40.0	28.19
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	38.43	28.18
Bra032063.1-P	Field mustard	plasma membrane	40.94	28.17
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.42	28.16
AT2G29120.1	Thale cress	plasma membrane	41.57	27.73
KRH50532	Soybean	plasma membrane	35.28	27.72
KRH50533	Soybean	plasma membrane	34.96	27.68
CDY36173	Canola	plasma membrane	35.12	27.67
CDY00544	Canola	plasma membrane	33.86	27.6
CDY45595	Canola	plasma membrane	37.32	27.56
CDY38574	Canola	plasma membrane	41.73	27.4
VIT_04s0069g00230.t01	Wine grape	plasma membrane	43.94	27.27
CDY51113	Canola	plasma membrane	36.69	27.12
Bra023313.1-P	Field mustard	plasma membrane	36.69	27.12
CDX85724	Canola	plasma membrane	36.38	26.89
CDY39533	Canola	plasma membrane	41.1	26.88
CDY31755	Canola	cytosol	38.9	26.76
Bra040761.1-P	Field mustard	cytosol	38.9	26.53
CDY56837	Canola	plasma membrane	38.11	26.36
TraesCS5D01G225900.1	Wheat	golgi	35.91	26.33
CDY31756	Canola	cytosol, peroxisome, plastid	35.59	26.04
Bra040760.1-P	Field mustard	cytosol	34.49	26.01
CDX73196	Canola	cytosol, peroxisome, plasma membrane	37.32	25.96
AT5G11210.5	Thale cress	plasma membrane	37.32	25.82
AT4G31710.2	Thale cress	plasma membrane	37.01	25.77
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	39.69	25.66
CDY70035	Canola	cytosol, plasma membrane	32.13	25.22
AT5G11180.2	Thale cress	plasma membrane	38.27	25.13
TraesCS5D01G226000.1	Wheat	plasma membrane	36.85	25.08
TraesCS5D01G226300.1	Wheat	plasma membrane	37.95	25.08
TraesCS5D01G226400.1	Wheat	plasma membrane	37.32	24.97
CDX72325	Canola	plasma membrane	26.3	24.78
PGSC0003DMT400023744	Potato	cytosol	33.86	24.6
CDY58212	Canola	cytosol, plasma membrane	31.97	24.34
Bra015817.1-P	Field mustard	plasma membrane	38.58	24.28
CDY68132	Canola	plasma membrane	38.58	24.28
CDY13449	Canola	cytosol	36.54	24.19
TraesCS6D01G330900.1	Wheat	plasma membrane	37.32	23.51
Bra023989.1-P	Field mustard	cytosol	36.22	23.35
TraesCS6D01G330500.1	Wheat	plasma membrane	37.17	23.21
TraesCS2D01G025600.1	Wheat	plasma membrane	23.62	23.01
TraesCS2D01G462300.1	Wheat	plasma membrane	35.12	22.9
TraesCS2D01G226400.1	Wheat	plasma membrane	32.13	22.03
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.0	21.42
TraesCS2D01G265700.1	Wheat	plasma membrane	30.87	21.17
TraesCS1D01G398500.1	Wheat	plasma membrane	30.08	20.41
TraesCS2D01G455600.2	Wheat	plasma membrane	29.45	20.35
TraesCS7D01G444100.2	Wheat	plasma membrane	30.24	19.88
VIT_04s0069g00330.t01	Wine grape	plastid	43.94	15.85
CDY50141	Canola	plasma membrane	11.5	13.77
CDY31759	Canola	cytosol, peroxisome, plasma membrane	9.92	13.38

Protein Annotations

MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674	GO:GO:0004871
GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005234	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0038023	InterPro:GPCR_3	InterPro:Glu/Gly-bd	InterPro:Iontro_rcpt	PFAM:PF01094	PFAM:PF10613
PRINTS:PR00248	PANTHER:PTHR43891	PANTHER:PTHR43891:SF19	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G266900	EnsemblPlants:TraesCS5D01G266900.1	TIGR:cd06366

Description

No Description!

Coordinates

chr5D:+:370832411..370840590

Molecular Weight (calculated)

70857.3 Da

IEP (calculated)

5.185

GRAVY (calculated)

0.086

Length

635 amino acids

Sequence
(BLAST)

001: MEKARRAMFF LLLLIADFSV AQDTAGEADE FHVGVILDLG SLVGKVARTS VLLAAQDFYT VHRNYSTKLV LHVVDSAGSD VQAASAAIEL LESYKVQAII
101: GPQKSSEAVF ISNIGNVTQV PIISFTATSP SLTYNSMPYF VRATLDDSTQ VKSIAALVQA CGWREVVAVY EDTDYGRGIL PYLTDALQEI DVRVPYRSAI
201: PSSATNETIM QELGVLIAMQ TRVFIVHMSS IMASLIFTKA KEVGMMNKGF AWITTNGVAN IIDSLNPSVI EAMEGVLGVR CHVPRSQELD NLSIRWNRMY
301: QQDNPYESPF NKLSIVGLWG YDTIWAIAHA AEKVGISSAR DKQPWPTKSS TCLESMVIST NGPELLSVIV QNKFRGLSGE FDLTDRQQLK VSVFQIINVV
401: ERGWREIGFW TVNGLLRKLK RDYSKKTGQA SMLDLNPVIW PGESTEIPMG WEIPRVGKKL RVGVCSSEFT EFIKTYKDPI TNATTASGLS IDIFEEAVKR
501: LHRPLSYEYL EFDTADAPIS GSYNDFVYQV YLQKYEIAVA DITIRSNRSL YVDFTAPYTE SGVGMIVPVK ENVNTDMWLF LKPLSTEMWF GSIVCFLYTG
601: VVVWLLEHLI GNEHVHVPFS LKQLAITIFS IFEES

Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)

001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL

Arabidopsis Description

GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.