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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G063540.6 Barley plasma membrane 70.72 73.36
TraesCS5B01G217700.1 Wheat plasma membrane 70.72 73.27
TraesCS5A01G218600.1 Wheat plasma membrane 70.4 72.95
TraesCS5D01G226600.1 Wheat plasma membrane 70.82 72.12
OQU89534 Sorghum plasma membrane 68.39 71.02
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 47.36 70.55
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 36.89 69.8
HORVU5Hr1G072170.1 Barley plasma membrane 58.56 69.42
TraesCS5D01G266800.1 Wheat plasma membrane 65.43 69.24
TraesCS5B01G257800.1 Wheat plasma membrane 65.54 68.66
TraesCS5A01G042800.1 Wheat plasma membrane 63.53 66.93
TraesCS5B01G046400.1 Wheat plasma membrane 63.32 66.7
TraesCS5D01G051300.1 Wheat golgi 63.11 66.41
HORVU5Hr1G010420.17 Barley plasma membrane 63.11 66.33
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 47.67 61.87
OQU84757 Sorghum plasma membrane 53.81 55.87
EER98937 Sorghum plasma membrane 55.6 55.66
OQU89536 Sorghum cytosol 51.9 54.31
OQU89527 Sorghum plasma membrane 52.01 52.9
VIT_04s0069g00200.t01 Wine grape cytosol 23.15 49.66
GSMUA_Achr3P04970_001 Banana plasma membrane 49.37 48.8
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 28.44 48.47
VIT_04s0069g00380.t01 Wine grape cytosol 20.82 48.05
GSMUA_Achr9P13570_001 Banana plasma membrane 43.34 44.96
VIT_04s0069g00720.t01 Wine grape cytosol 28.01 44.39
VIT_04s0069g00560.t01 Wine grape plasma membrane 41.86 44.2
VIT_04s0069g00540.t01 Wine grape plasma membrane 32.56 43.56
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 37.63 43.0
VIT_04s0069g00170.t01 Wine grape plasma membrane 41.75 42.66
VIT_04s0069g00670.t01 Wine grape plasma membrane 41.33 42.55
VIT_04s0069g00620.t01 Wine grape plasma membrane 42.28 40.4
VIT_04s0069g00060.t01 Wine grape plasma membrane 41.33 39.94
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 36.47 39.84
Bra032072.1-P Field mustard plasma membrane 37.21 39.29
Solyc08g006500.2.1 Tomato extracellular 39.96 38.93
Bra032063.1-P Field mustard plasma membrane 37.74 38.68
CDY51113 Canola plasma membrane 34.99 38.53
Bra023313.1-P Field mustard plasma membrane 34.99 38.53
KRH50533 Soybean plasma membrane 32.66 38.53
VIT_04s0069g00230.t01 Wine grape plasma membrane 41.65 38.51
KRH50532 Soybean plasma membrane 32.77 38.37
CDX85724 Canola plasma membrane 34.67 38.18
AT2G29110.2 Thale cress plasma membrane 38.05 37.97
CDY54213 Canola plasma membrane 35.62 37.91
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 37.42 37.9
AT2G24720.1 Thale cress plasma membrane 36.79 37.83
CDY45595 Canola plasma membrane 34.25 37.67
AT2G29100.2 Thale cress plasma membrane 37.42 37.58
AT5G27100.1 Thale cress plasma membrane 35.62 37.4
CDY36173 Canola plasma membrane 31.82 37.34
PGSC0003DMT400023744 Potato cytosol 34.25 37.07
AT2G24710.3 Thale cress plasma membrane 35.62 36.67
AT2G29120.1 Thale cress plasma membrane 36.68 36.45
KXG35670 Sorghum plasma membrane 37.53 36.34
AT5G11210.5 Thale cress plasma membrane 35.2 36.27
CDY70035 Canola cytosol, plasma membrane 30.76 35.97
CDY00544 Canola plasma membrane 29.6 35.94
CDY38574 Canola plasma membrane 36.68 35.88
CDY31756 Canola cytosol, peroxisome, plastid 32.77 35.71
CDX73196 Canola cytosol, peroxisome, plasma membrane 34.46 35.71
KXG19504 Sorghum golgi, plasma membrane, vacuole 32.88 35.71
AT5G11180.2 Thale cress plasma membrane 36.36 35.57
Bra040760.1-P Field mustard cytosol 31.5 35.39
CDY39533 Canola plasma membrane 36.15 35.22
CDX72325 Canola plasma membrane 25.05 35.16
CDY31755 Canola cytosol 34.14 34.99
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 21.88 34.91
Bra040761.1-P Field mustard cytosol 34.14 34.69
KXG35672 Sorghum mitochondrion, plasma membrane 35.52 34.64
AT4G31710.2 Thale cress plasma membrane 33.09 34.32
KXG31244 Sorghum mitochondrion 36.68 34.29
CDY56837 Canola plasma membrane 32.98 33.99
KXG35671 Sorghum plasma membrane 35.2 33.98
CDY58212 Canola cytosol, plasma membrane 29.92 33.93
CDY68132 Canola plasma membrane 35.31 33.1
Bra015817.1-P Field mustard plasma membrane 35.31 33.1
CDY63640 Canola cytosol 18.92 32.97
CDY13449 Canola cytosol 32.35 31.91
CDY31759 Canola cytosol, peroxisome, plasma membrane 15.86 31.85
Bra023989.1-P Field mustard cytosol 32.98 31.68
EER97313 Sorghum plasma membrane 29.07 29.76
EER90229 Sorghum plasma membrane 29.07 29.7
CDY50141 Canola plasma membrane 16.6 29.62
KXG26996 Sorghum plasma membrane 28.96 29.3
KXG20640 Sorghum plasma membrane 28.44 28.92
KXG20638 Sorghum plasma membrane 28.96 28.54
OQU84212 Sorghum mitochondrion 27.27 28.38
KXG29299 Sorghum plasma membrane 27.48 28.08
EER95720 Sorghum plastid 28.65 27.85
EER95721 Sorghum plastid 28.33 27.32
VIT_04s0069g00330.t01 Wine grape plastid 41.33 22.22
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptUniProt:C5XD03
EnsemblPlants:EER98936ProteinID:EER98936ProteinID:EER98936.2GO:GO:0003674GO:GO:0004871GO:GO:0004970
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023
InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF19InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G208700SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0003C6BBB2SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:60033825..60038652
Molecular Weight (calculated)
105485.0 Da
IEP (calculated)
6.758
GRAVY (calculated)
-0.055
Length
946 amino acids
Sequence
(BLAST)
001: MDRTPQSILF LLLLIFSPSA AQNTIGSSPN KFHVGVILDL GSPVGKVGRT SVSLALEDFY ASHRNCSTKV VLHFKDSAGN DVQAASAAIE LLETYKVQAI
101: IGPQKSSEAV FISNLGNTTQ VPIVSFTATS PSLTSDIMPY FVRATLNDSV QVNSIASLIK AYGWREVVPV YDDTDYGRGI LPHLIDALQQ IDAHIPYRSV
201: ISLSATSENI MQELFKLKTM QTRVFIVHMS STRASLLFTK AKEAGMMTKG FVWIITNGLA NIIDSLNPSI IEAMNGVIGV RFHVPRSKEL ESFSIRWNRM
301: YQQDNPTESP FNKLSIFGLW GYDTVWALAQ AAEKIGVLIN KNKRLQFSKN STCLESLAVS RFGPELLTAI VQNKFRGLSG NFDLTDRQLQ VSALQIINVV
401: GRSWRHIGFW TLKNGFPYQL NQNGLKLTMP ASMQHLNPVI WPGESTEVPR GWELPASANK IRVGVHTSAY PEFIKTSKDP VTNATRASGL SINIFEEAVK
501: RLPFALPYEY QAFDTVDTQS TGSYNDFVYQ VYLQRYDMAI GDITIRYNRT MYVDFTIPYT ESGVAMIVPV KEKVNNNMWI FLKPLTKEMW FGSIMFFIYT
601: GIVVWLLERL SGNGYLNGPF SLKQLGIVMF FSIFEEKEKL ECFLSRILLL VWMFVLLVLA SSYTASFASM LLVQQLSPTV TDIHELQKQG AYVGFHRGSY
701: IEGLLEDIGF EKSKIRPYDT PDDFHIALSN EGRHGGVAAL VLEVPYIKLF LAKYCNGYTM VGPIYKSAGF AFALPKRSPL LTEISRAILN ITEGDSIIQI
801: EKKWIDQNSC QNEEEVADSG AITFCNFGGL FLLTGLVTTC SLSIVLLRNQ YKKGQRINTD YQNEQGHGPQ EENGHIQDGD QNNEENGGCN DIENQATTIS
901: MPRPNTNSDE LRDCPQNNKA IALTCFGSQV THRGGVTNIG DQVAQV
Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)
001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL
Arabidopsis Description
GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.