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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G226400.1 Wheat plasma membrane 98.1 94.92
HORVU2Hr1G045730.6 Barley plasma membrane 96.32 93.2
TraesCS2A01G220700.1 Wheat plasma membrane 95.2 91.92
EER97313 Sorghum plasma membrane 80.47 78.03
Zm00001d006508_P003 Maize plasma membrane 79.35 77.03
GSMUA_Achr9P11690_001 Banana plasma membrane 63.5 63.72
GSMUA_Achr9P02750_001 Banana plasma membrane 63.84 62.38
GSMUA_Achr6P00460_001 Banana plasma membrane 61.83 59.89
Solyc05g045650.2.1 Tomato plasma membrane 55.69 56.9
TraesCS2B01G285400.1 Wheat plasma membrane 58.48 56.47
VIT_12s0059g02270.t01 Wine grape plasma membrane 57.81 56.06
TraesCS7B01G355500.1 Wheat plasma membrane 57.25 54.87
TraesCS1B01G418500.1 Wheat plasma membrane 57.37 54.86
KRH26793 Soybean plasma membrane 57.59 54.49
KRH22559 Soybean plasma membrane 57.37 54.28
CDY06165 Canola plasma membrane 52.57 54.08
PGSC0003DMT400013497 Potato plasma membrane 57.25 54.06
KRH56121 Soybean plasma membrane 55.92 53.93
KRH25388 Soybean plasma membrane 55.58 53.9
Solyc07g052400.2.1 Tomato cytosol 48.77 53.88
PGSC0003DMT400065539 Potato plasma membrane 56.25 53.56
CDY10044 Canola plasma membrane 55.13 52.61
Bra015398.1-P Field mustard plasma membrane 54.24 51.1
CDY49512 Canola plasma membrane 54.35 51.1
AT1G05200.1 Thale cress plasma membrane 54.46 50.89
Bra032480.1-P Field mustard plasma membrane 54.58 50.88
CDY46839 Canola plasma membrane 53.91 50.79
TraesCS2B01G477300.4 Wheat plasma membrane 51.67 50.38
AT2G32390.5 Thale cress plasma membrane 53.35 50.16
TraesCS6B01G066200.1 Wheat plasma membrane 50.22 48.86
TraesCS6B01G065500.1 Wheat plasma membrane 50.22 48.6
Bra005589.1-P Field mustard plasma membrane 51.23 48.57
TraesCS6B01G065700.1 Wheat plasma membrane 49.78 48.32
TraesCS6B01G065400.1 Wheat plasma membrane 49.22 47.62
CDY66698 Canola plasma membrane 45.54 45.89
CDY48271 Canola plastid 37.39 45.33
CDX84735 Canola plasma membrane 44.87 45.27
CDY12211 Canola plasma membrane 41.18 41.51
TraesCS7B01G242400.1 Wheat plasma membrane 33.59 33.26
TraesCS5B01G217000.1 Wheat mitochondrion, plasma membrane 30.92 30.98
TraesCS5B01G217800.1 Wheat plasma membrane 29.02 30.52
TraesCS5B01G218900.1 Wheat plasma membrane 32.14 30.44
TraesCS5B01G217700.1 Wheat plasma membrane 30.47 29.9
TraesCS5B01G257800.1 Wheat plasma membrane 30.13 29.9
TraesCS5B01G218700.1 Wheat plasma membrane 31.03 29.8
TraesCS5B01G046400.1 Wheat plasma membrane 29.69 29.62
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 32.14 29.45
TraesCS5B01G217500.1 Wheat plasma membrane 31.25 29.41
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 32.25 29.16
TraesCS6B01G438400.1 Wheat plasma membrane 29.02 28.86
TraesCS7B01G057800.1 Wheat plasma membrane 28.24 28.75
TraesCS5B01G217100.1 Wheat plasma membrane 29.91 28.63
TraesCS6B01G381400.1 Wheat plasma membrane 32.37 28.6
TraesCS6B01G380800.1 Wheat plasma membrane 31.7 27.79
TraesCS6B01G380900.1 Wheat plasma membrane 28.01 26.06
Protein Annotations
MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674GO:GO:0004871
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891PANTHER:PTHR43891:SF12
InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_N
TMHMM:TMhelixEnsemblPlantsGene:TraesCS2B01G246200EnsemblPlants:TraesCS2B01G246200.1TIGR:cd06366TIGR:cd13686SEG:seg
Description
No Description!
Coordinates
chr2B:-:250703957..250708999
Molecular Weight (calculated)
97548.6 Da
IEP (calculated)
5.769
GRAVY (calculated)
0.111
Length
896 amino acids
Sequence
(BLAST)
001: MGSAHLAAIL LCVCIIAGGA IADSQNGTNG VPRPAEVRIG ALFTFDSVIG RAVKPAIELA VADVNADPTV LPGTKLSLLM QDTNCSGFVG TIEALQLLAK
101: DVIAVLGPQS SAIAHIISHA VNKLQVPLIS FAASDPTLSS LEYPYFVRAT QSDYYQMSAV ASIISQYQWR EVIAIYVDDD YGRGGITALG DALAKKMSKI
201: AYKAKLPPGA GRTAIQDMLM QVNEMESRVY VVHVNPDSGM TVFSAAKSLG MMSSGYVWIA TDWLSSVIDS SGHVDSDATE NTQGVITLRQ HVADSGIQQS
301: LLPKLNNLTR KENRSSFSSY TAHAYDSVWL VAHAVEQFLS AGNAISFSVN QNLQAIKGSS LQLDSLRVLN NGDKLLEKVL QANFTGVSGQ VQFTLDRNLI
401: HPAYDILNIG GTGFRTIGYW SNFSGLSVAA PENLHSVPLN STTNDIQLHD VIWPGQTAEK PRGWVFPYHG KLLRIGVPLR TSYNEFVMQD DGPDGVKGFS
501: VDVFKSAISL LPYPVGCTFV LFGDGLKNPS YSDLVQKVSE NYFDAAIGDI SIVTNRTRLV DFTQPYTESG LLFLFVGTVV WILEHRTNTE FRGTPRQQIM
601: TVCWFSFSTM FFAHRENTSS ALGRFVLLVW LFVVLIINSS YTASLTSLLT VQELSSGVKG LDSLISSSSA IGYQVGSFAR NYLVEELNIA DSRLVPLNSP
701: SDYARALELG SGNGGVAAII DELPYVEIFL SKYCKFKTVG QVFTKSGWGF AFPRDSPLAD DLSTAILTLS ENGDLQRIHD EWLSGMKGCE SDDSGMSSNS
801: LSLSSFWGLF VVCGLACVIA LLIFFWRILF QYSKYNNQVE LEAAIVNRPA RLTSIKSLIS FVDKREEEVK NALKKKPNGS QQARIGITEE PSTLPL
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.