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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84735 Canola plasma membrane 94.71 94.82
CDY48271 Canola plastid 70.64 84.98
Bra005589.1-P Field mustard plasma membrane 82.45 77.57
CDY12211 Canola plasma membrane 76.72 76.72
AT2G32390.5 Thale cress plasma membrane 79.64 74.29
CDY49512 Canola plasma membrane 70.75 66.0
CDY46839 Canola plasma membrane 70.08 65.51
CDY06165 Canola plasma membrane 64.0 65.33
CDY10044 Canola plasma membrane 68.5 64.86
Solyc05g045650.2.1 Tomato plasma membrane 55.01 55.76
VIT_12s0059g02270.t01 Wine grape plasma membrane 56.58 54.44
KRH26793 Soybean plasma membrane 57.93 54.38
Solyc07g052400.2.1 Tomato cytosol 49.38 54.13
PGSC0003DMT400065539 Potato plasma membrane 57.26 54.09
KRH22559 Soybean plasma membrane 57.14 53.64
PGSC0003DMT400013497 Potato plasma membrane 56.92 53.32
KRH25388 Soybean plasma membrane 55.12 53.03
KRH56121 Soybean plasma membrane 55.01 52.64
GSMUA_Achr9P11690_001 Banana plasma membrane 50.06 49.83
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 49.49 48.94
GSMUA_Achr9P02750_001 Banana plasma membrane 50.06 48.53
GSMUA_Achr6P00460_001 Banana plasma membrane 49.83 47.89
CDX75491 Canola cytosol, plasma membrane, plastid 10.91 47.55
CDY68928 Canola extracellular, plasma membrane 27.9 46.53
CDY70557 Canola extracellular, plasma membrane 27.67 46.15
TraesCS2D01G265700.1 Wheat plasma membrane 47.81 45.9
Zm00001d014458_P001 Maize plasma membrane 47.47 45.87
TraesCS2B01G285400.1 Wheat plasma membrane 47.81 45.8
TraesCS2A01G257200.1 Wheat plasma membrane 47.81 45.75
EER90229 Sorghum plasma membrane 47.47 45.57
TraesCS2B01G246200.1 Wheat plasma membrane 45.89 45.54
Os06t0680500-01 Rice cytosol, plasma membrane 45.56 45.51
Zm00001d014451_P001 Maize plasma membrane 48.37 45.41
KXG20640 Sorghum plasma membrane 47.47 45.38
HORVU1Hr1G086120.3 Barley plasma membrane 47.58 45.34
TraesCS1A01G390300.2 Wheat plasma membrane 47.81 45.31
TraesCS1D01G398500.1 Wheat plasma membrane 47.58 45.19
EER97313 Sorghum plasma membrane 46.79 45.02
KXG20638 Sorghum plasma membrane 48.59 45.0
Zm00001d014456_P001 Maize plasma membrane 46.79 44.97
Zm00001d006508_P003 Maize plasma membrane 46.46 44.75
TraesCS2D01G226400.1 Wheat plasma membrane 46.46 44.6
TraesCS7A01G455200.1 Wheat plasma membrane 46.79 44.54
TraesCS1B01G418500.1 Wheat plasma membrane 46.91 44.5
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 46.79 44.49
TraesCS7B01G355500.1 Wheat plasma membrane 46.46 44.17
HORVU2Hr1G045730.6 Barley plasma membrane 46.01 44.17
TraesCS2A01G220700.1 Wheat plasma membrane 46.01 44.07
Zm00001d018614_P003 Maize plastid 46.91 43.48
EER95720 Sorghum plastid 47.36 43.27
CDY65624 Canola plasma membrane 42.18 43.1
CDY24327 Canola plasma membrane 44.21 43.09
TraesCS7D01G444100.2 Wheat plasma membrane 46.79 43.06
CDX78008 Canola plasma membrane 42.97 42.87
CDY52597 Canola plasma membrane 43.76 42.65
CDX73718 Canola plasma membrane 42.74 42.65
Zm00001d018615_P001 Maize plasma membrane 46.01 42.6
Os07t0103100-01 Rice plasma membrane 45.67 42.47
CDY35797 Canola plasma membrane 38.7 41.85
CDX75490 Canola extracellular, plasma membrane, vacuole 27.33 41.75
CDX76331 Canola plasma membrane 42.52 41.54
CDX69127 Canola plasma membrane 42.41 41.34
CDX80728 Canola cytosol 11.25 41.32
CDY71348 Canola golgi, plasma membrane 12.04 40.38
CDX95758 Canola cytosol 18.34 40.05
EER95721 Sorghum plastid 44.09 39.96
CDY15337 Canola plasma membrane 37.46 37.25
CDY48270 Canola plasma membrane 38.47 37.09
CDY12210 Canola plasma membrane 38.36 37.02
CDX84734 Canola plasma membrane 38.25 36.72
CDY66699 Canola plasma membrane 37.91 36.39
CDY36173 Canola plasma membrane 23.06 25.43
CDY54213 Canola plasma membrane 25.31 25.31
CDY58212 Canola cytosol, plasma membrane 23.73 25.3
CDY45595 Canola plasma membrane 24.41 25.23
CDY70035 Canola cytosol, plasma membrane 22.72 24.97
CDY00544 Canola plasma membrane 21.48 24.52
CDY31755 Canola cytosol 25.42 24.49
GSMUA_Achr5P00750_001 Banana mitochondrion 51.07 24.25
CDY39533 Canola plasma membrane 26.43 24.2
CDY31756 Canola cytosol, peroxisome, plastid 23.62 24.19
CDX72325 Canola plasma membrane 18.11 23.89
CDY38574 Canola plasma membrane 25.87 23.78
CDX73196 Canola cytosol, peroxisome, plasma membrane 24.18 23.55
CDX85724 Canola plasma membrane 22.72 23.52
CDY51113 Canola plasma membrane 22.72 23.52
CDY56837 Canola plasma membrane 24.18 23.42
CDY63640 Canola cytosol 13.72 22.47
CDY68132 Canola plasma membrane 25.2 22.2
CDY13449 Canola cytosol 22.72 21.06
CDY31759 Canola cytosol, peroxisome, plasma membrane 10.91 20.59
CDY50141 Canola plasma membrane 11.47 19.25
CDY72467 Canola cytosol 0.11 1.35
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078JGF8UniProt:A0A078JGF8
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY66698ProteinID:CDY66698ProteinID:CDY66698.1GO:GO:0003674GO:GO:0004871
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235
GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00055595001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00497PFAM:PF01094
PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891PANTHER:PTHR43891:SF12InterPro:Peripla_BP_ISMART:SM00062
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EE9F9D
SEG:seg:::::
Description
BnaCnng51940DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078JGF8]
Coordinates
chrLK035416:-:424..4186
Molecular Weight (calculated)
99181.5 Da
IEP (calculated)
6.189
GRAVY (calculated)
-0.204
Length
889 amino acids
Sequence
(BLAST)
001: MYQVVMTPFV FLSGPLFSFD VDFNGQGAGR ESFLRNSSFS SRPSSVNVGA LFTYDSFIGR AAKPAFMVAI EDVNADQNIL RGTKLNIVFH DSNCSGFVGT
101: MGALQVMENK VVAAIGPQSS GIAHLISHVA NELHVPLLSF AATDPTLSSL QYPYFLRSTQ NDYFQMNAIA DFVSYCRWRE VVAIFVDDEY GRNGISVLGD
201: ALAKKRAKIS YKAAFRPGAD KSSLHDLLVS ANLMESRIFV VHVNPDSGLN VFSVAKSLGM MESGYVWIAT DWLLTAWDSG LDPKTMDLLQ GVVAFRHYTP
301: ESNEKRRFKA RWKSLRTKET SGGDDDGFNS YAMYAYDTVW LVARALDVFF SQGNRVTFST DPNLRKTNGT NIKFSALSVF NEGERFLQVI HDMNYTGLTG
401: QIEFDSEKNR INPAYDVINI NSRGPHRVGY WSNHTGFSVE PPETFYSKPP NTSTEHQRLN EIIWPGGVTK PPRGWVFPDN GEPLKIGVPN RVSYKNYASE
501: EKNQLGVKGY CIDIFEAAVE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVA SNNFDVAVGD ITIVTNRTKF VDFTQPFMES GLVVPSFGFL NTGLMKSSVD
601: LLGVKSSPFS GLASQQCSSL TYSSFLYSCF FRGEHGEHFG ELTSRIEGMD SLITSSEPIG VQDGTFAYKY LVNELNIAPS RIIPLKNEED YLSALQLGPR
701: GGGVAAIVDE LPYIKALLSN SNCEFRTVGQ EFTRTGWGFA FQRDSPLAVD MSTAILQLSE EGKLEKIRKK WLTYSHECSV QIADTENYQL SVQSFWGLFL
801: ICGIVWFIAL TLFCWKVFWQ CQGLRPEEES DEVRVSEEAS SSRSGRSLRV GSFKDLIKVV DKREVEIKDM LKQKSSKKLK ASQSSAETP
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.