CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04948	Canola	extracellular	98.77	98.77
AT5G05340.1	Thale cress	extracellular	89.81	89.81
CDX70158	Canola	extracellular	89.2	88.92
CDX98835	Canola	extracellular	89.2	88.92
KRH64171	Soybean	extracellular	74.07	75.0
KRH53775	Soybean	extracellular	74.07	75.0
Solyc05g052280.2.1	Tomato	extracellular	72.53	72.98
PGSC0003DMT400030402	Potato	extracellular	72.22	72.67
Solyc06g050440.2.1	Tomato	extracellular	69.14	70.22
PGSC0003DMT400036487	Potato	extracellular	69.14	70.22
CDX80957	Canola	extracellular	70.06	70.06
CDY52147	Canola	extracellular	70.06	70.06
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	68.52	69.16
KRH73217	Soybean	nucleus	68.21	68.21
KRH14872	Soybean	nucleus	67.59	67.18
CDY71390	Canola	cytosol	49.38	62.5
CDY02817	Canola	cytosol	58.33	59.06
CDY32701	Canola	extracellular	59.26	58.9
CDY02820	Canola	extracellular	58.64	58.28
CDY65372	Canola	extracellular	53.7	54.89
CDX81650	Canola	extracellular	53.4	54.75
CDY66455	Canola	extracellular	53.09	54.26
CDY53543	Canola	cytosol, extracellular	38.58	53.19
CDX88673	Canola	extracellular	57.1	50.55

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078FP65	UniProt:A0A078FP65
EnsemblPlants:CDY14118	ProteinID:CDY14118	ProteinID:CDY14118.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00078663001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF24	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
UniParc:UPI0004EECC78	SEG:seg	:	:	:	:

Description

BnaC02g02350DPeroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078FP65]

Coordinates

chrLK032040:+:515574..517410

Molecular Weight (calculated)

34113.3 Da

IEP (calculated)

8.948

GRAVY (calculated)

-0.040

Length

324 amino acids

Sequence
(BLAST)

001: MASNQFVSIL VLVVTLLLQG DNNNVVKAQL TTNFYSTSCP NLLSTVKSGV KSAVSSQPRM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAGPNRN
101: SARGFTVIDN IKSAVEKACP GVVSCADILA IAARDSVVQL GGPNWNVKVG RRDAKTASQA AANSNIPAPN MSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCVNFRAR VYNETNINAA FATLRQRSCP RAAGSGDANL APLDINSATS FDNSYFKNLM AQRGLLHSDQ VLFNGGSTDS IVRGYSNSPS SFNSDFASAM
301: IKMGDISPLT GSSGEIRKVC GKTN

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.