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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14872 Soybean nucleus 97.22 96.63
KRH64171 Soybean extracellular 82.41 83.44
KRH53775 Soybean extracellular 81.79 82.81
PGSC0003DMT400030402 Potato extracellular 75.62 76.09
Solyc05g052280.2.1 Tomato extracellular 75.31 75.78
VIT_13s0067g02360.t01 Wine grape endoplasmic reticulum, extracellular 74.38 75.08
Solyc06g050440.2.1 Tomato extracellular 73.46 74.61
PGSC0003DMT400036487 Potato extracellular 73.46 74.61
AT5G05340.1 Thale cress extracellular 70.68 70.68
CDX98835 Canola extracellular 69.14 68.92
CDX70158 Canola extracellular 68.83 68.62
Bra028761.1-P Field mustard extracellular 68.52 68.52
CDY14118 Canola extracellular 68.21 68.21
CDY04948 Canola extracellular 68.21 68.21
Bra009105.1-P Field mustard extracellular 58.02 67.87
KRH30136 Soybean nucleus 66.67 65.65
KRG98178 Soybean nucleus 66.36 65.55
Bra005850.1-P Field mustard extracellular 63.58 63.58
KRH72792 Soybean nucleus 63.58 63.58
CDY52147 Canola extracellular 63.58 63.58
KRH00399 Soybean extracellular 61.73 63.29
KRH17144 Soybean extracellular 63.27 63.27
CDX80957 Canola extracellular 62.96 62.96
KRH25796 Soybean extracellular 60.49 61.44
KRG98181 Soybean extracellular 60.19 60.94
KRH72788 Soybean endoplasmic reticulum, vacuole 59.88 60.62
KRH30142 Soybean extracellular 59.57 60.31
KRH55722 Soybean extracellular, vacuole 59.26 60.19
KRH00400 Soybean extracellular 59.26 59.63
KRH40790 Soybean extracellular 59.26 59.63
KRH17142 Soybean extracellular, vacuole 58.64 59.56
KRH65472 Soybean plastid 55.86 59.54
KRH27066 Soybean extracellular 57.72 59.37
KRH40791 Soybean endoplasmic reticulum, extracellular, plastid 62.35 59.06
KRH65467 Soybean extracellular 58.33 58.88
KRH65470 Soybean extracellular 57.41 58.31
KRH76091 Soybean extracellular 57.41 58.31
KRG91738 Soybean endoplasmic reticulum, extracellular, vacuole 58.02 58.2
KRG98179 Soybean extracellular 58.33 58.15
KRH65471 Soybean extracellular 57.1 57.99
KRH76088 Soybean extracellular 56.79 57.68
KRH35030 Soybean extracellular 57.41 57.59
KRH14873 Soybean extracellular, nucleus 57.41 57.23
KRH65474 Soybean extracellular 56.79 56.79
KRH72790 Soybean endoplasmic reticulum 56.48 56.66
KRH29155 Soybean extracellular 56.48 56.66
KRH30138 Soybean extracellular 56.48 56.48
KRG98180 Soybean extracellular 55.86 56.21
KRH65475 Soybean extracellular 55.56 56.07
KRG92979 Soybean extracellular 56.17 54.65
KRH65476 Soybean extracellular, vacuole 53.7 54.55
KRH72789 Soybean extracellular, golgi 54.32 53.33
KRH65489 Soybean extracellular 53.7 52.73
KRH17143 Soybean endoplasmic reticulum 56.79 51.25
KRH65488 Soybean extracellular 47.53 47.24
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10EntrezGene:100791414MapMan:35.1EMBL:ACUP02001272
EnsemblPlantsGene:GLYMA_02G259300GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114
GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacUniProt:I1JIB0InterPro:IPR002016EnsemblPlants:KRH73217
ProteinID:KRH73217ProteinID:KRH73217.1PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435
ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31388PANTHER:PTHR31388:SF24MetaCyc:PWY-5461MetaCyc:PWY-5466
MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI0002336D19:
Description
hypothetical protein
Coordinates
chr2:-:44632522..44634801
Molecular Weight (calculated)
35256.7 Da
IEP (calculated)
8.811
GRAVY (calculated)
-0.224
Length
324 amino acids
Sequence
(BLAST)
001: MASSCSSFMI TLAVLVLLLG TSSANANPTL HTNFYYSSCP KLFDTVKRTV ESAISKETRM GASLLRLFFH DCFVNGCDGS ILLDDTSSFT GEKNAGPNRN
101: SARGFEVIDQ IKSAVEKVCP GVVSCADILA IAARDSVEIL GGPTWDVKLG RRDSRTASQS AANNDIPRPT SNLNQLISRF NALGLSTKDL VALSGGHTIG
201: QARCTTFRAR IYNETNIDSS FARMRQSRCP RTSGSGDNNL APIDFATPRF FDNHYFKNLI QKKGLIHSDQ QLFNGGSTDS IVRTYSTNPA SFFADFSAAM
301: IRMGDISPLT GSRGEIRENC RRVN
Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)
001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN
Arabidopsis Description
PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.