CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70158	Canola	extracellular	99.08	99.08
AT5G05340.1	Thale cress	extracellular	89.23	89.51
CDY14118	Canola	extracellular	88.92	89.2
CDY04948	Canola	extracellular	88.62	88.89
KRH64171	Soybean	extracellular	74.77	75.94
KRH53775	Soybean	extracellular	74.77	75.94
Solyc05g052280.2.1	Tomato	extracellular	71.38	72.05
PGSC0003DMT400030402	Potato	extracellular	71.08	71.74
CDX80957	Canola	extracellular	71.38	71.6
CDY52147	Canola	extracellular	71.38	71.6
Solyc06g050440.2.1	Tomato	extracellular	69.23	70.53
PGSC0003DMT400036487	Potato	extracellular	69.23	70.53
KRH73217	Soybean	nucleus	68.92	69.14
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	67.69	68.54
KRH14872	Soybean	nucleus	68.31	68.1
CDY71390	Canola	cytosol	48.62	61.72
CDY32701	Canola	extracellular	57.85	57.67
CDY02817	Canola	cytosol	56.31	57.19
CDY02820	Canola	extracellular	56.92	56.75
CDY66455	Canola	extracellular	52.0	53.31
CDY65372	Canola	extracellular	52.0	53.31
CDX81650	Canola	extracellular	51.38	52.85
CDY53543	Canola	cytosol, extracellular	37.54	51.91
CDX88673	Canola	extracellular	56.31	50.0

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078E9R9	EnsemblPlants:CDX98835
ProteinID:CDX98835	ProteinID:CDX98835.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00106935001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF24	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
UniParc:UPI0004EE7332	SEG:seg	:	:	:	:

Description

BnaC09g50000D

Coordinates

chrLK031907:-:216568..218323

Molecular Weight (calculated)

34255.1 Da

IEP (calculated)

7.982

GRAVY (calculated)

-0.062

Length

325 amino acids

Sequence
(BLAST)

001: MASNNLFIAI LAIVVTLSLQ GDNNNVVQAQ LTTNFYSTSC PNLLSTVRST VKSAVDSQPR TGASILRLFF HDCFVNGCDG SILLDDTSSF TGEQNANPNR
101: NSARGFNVID NIKTAVEAAC PGVVSCADIL AIAARDSVVL LGGPNWNVKV GRRDARTASQ AAANSNIPAP TSSLSQLISS FSAVGLSTRD MVALSGAHTI
201: GQSRCTNFRT RVYNETNINA AFATLRQRSC PRAAGSGDGN LAPLDVNSAN FFDNSYFKNL VAQRGLLHSD QELFNGGSTD SIVTGYSNNP ASFSSDFTAA
301: MIKMGDISPL TGSSGEIRKV CGRTN

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.