CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005850.1-P	Field mustard	extracellular	100.0	100.0
CDX80957	Canola	extracellular	91.67	91.67
CDX98835	Canola	extracellular	71.6	71.38
CDX70158	Canola	extracellular	71.3	71.08
CDY14118	Canola	extracellular	70.06	70.06
CDY04948	Canola	extracellular	69.75	69.75
KRH64171	Soybean	extracellular	66.98	67.81
KRH53775	Soybean	extracellular	65.74	66.56
Solyc05g052280.2.1	Tomato	extracellular	64.81	65.22
PGSC0003DMT400030402	Potato	extracellular	64.51	64.91
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	63.89	64.49
Solyc06g050440.2.1	Tomato	extracellular	63.27	64.26
PGSC0003DMT400036487	Potato	extracellular	62.96	63.95
KRH73217	Soybean	nucleus	63.58	63.58
KRH14872	Soybean	nucleus	62.65	62.27
CDY71390	Canola	cytosol	45.68	57.81
CDY32701	Canola	extracellular	57.1	56.75
CDY02817	Canola	cytosol	55.86	56.56
CDY02820	Canola	extracellular	56.48	56.13
CDY65372	Canola	extracellular	50.31	51.42
CDX81650	Canola	extracellular	49.69	50.95
CDY66455	Canola	extracellular	49.38	50.47
CDY53543	Canola	cytosol, extracellular	35.8	49.36
CDX88673	Canola	extracellular	53.4	47.27

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078IQG1	UniProt:A0A078IQG1
EnsemblPlants:CDY52147	ProteinID:CDY52147	ProteinID:CDY52147.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00004973001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873
PANTHER:PTHR31388	PANTHER:PTHR31388:SF56	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253FC6B

Description

BnaA03g55260DPeroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078IQG1]

Coordinates

chrLK033059:-:75827..77466

Molecular Weight (calculated)

34962.5 Da

IEP (calculated)

7.703

GRAVY (calculated)

0.043

Length

324 amino acids

Sequence
(BLAST)

001: MDSNKLIAFL VIVVTLLLHG NNYTVVEAQL SQGFYSSSCP LLLPIVRTAV TSAVAFDPRM GASLLRLFYL DCFVNGCDAS ILLDDTSSFT GEQNAASNHN
101: SARGFNVIDN IKSAVERVCP GVVSCADILA IAARDSVVTL GGPRWRLNLG RRDARTASQA AANSSIPAPT SSLSQLITSF ANLGFTAREM VALSGAHTIG
201: QAQCRNFRTR IYQETNIDPT FAATRQQNCP ITSGSGDGNL ALLDSLTPFV FDNSYFRNLM SQRGLLHFDQ VLFNGGSTDS IVREYSQNAR VFRNDFAAAM
301: LKMSQISPLT GSDGEIRMSC GRTN

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.