Factsheet for VIT_13s0067g02360.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 4
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53775	Soybean	extracellular	78.19	78.44
KRH64171	Soybean	extracellular	77.26	77.5
PGSC0003DMT400030402	Potato	extracellular	77.26	77.02
Solyc05g052280.2.1	Tomato	extracellular	76.32	76.09
Solyc06g050440.2.1	Tomato	extracellular	74.45	74.92
PGSC0003DMT400036487	Potato	extracellular	74.14	74.61
VIT_06s0004g07770.t01	Wine grape	extracellular	74.45	74.45
KRH73217	Soybean	nucleus	75.08	74.38
KRH14872	Soybean	nucleus	74.14	73.01
AT5G05340.1	Thale cress	extracellular	72.9	72.22
Bra028761.1-P	Field mustard	extracellular	69.47	68.83
CDY14118	Canola	extracellular	69.16	68.52
CDY04948	Canola	extracellular	69.16	68.52
VIT_08s0058g00980.t01	Wine grape	extracellular	56.07	68.44
CDX70158	Canola	extracellular	69.16	68.31
Bra009105.1-P	Field mustard	extracellular	58.57	67.87
CDX98835	Canola	extracellular	68.54	67.69
VIT_08s0058g00970.t01	Wine grape	extracellular	55.45	67.68
VIT_12s0028g01830.t01	Wine grape	extracellular	56.39	66.3
Bra005850.1-P	Field mustard	extracellular	64.49	63.89
CDX80957	Canola	extracellular	64.49	63.89
CDY52147	Canola	extracellular	64.49	63.89
VIT_06s0004g07740.t01	Wine grape	cytosol, extracellular, nucleus	52.34	63.88
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	52.02	62.78
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	51.4	62.03
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	51.09	61.65
VIT_18s0001g06890.t01	Wine grape	extracellular	50.16	61.22
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	49.84	60.38
VIT_18s0001g06850.t01	Wine grape	extracellular	59.5	60.25
VIT_12s0028g01840.t01	Wine grape	extracellular	59.19	59.94
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	49.53	59.77
VIT_18s0001g06840.t01	Wine grape	extracellular	59.19	59.75
VIT_08s0058g00990.t01	Wine grape	extracellular	58.57	59.12
VIT_01s0010g02010.t01	Wine grape	plastid	55.14	58.61
VIT_06s0004g07750.t01	Wine grape	extracellular	54.21	55.95
VIT_01s0010g02000.t01	Wine grape	extracellular	54.83	54.32

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100257059	wikigene:100257059	MapMan:35.1
ProteinID:CCB49814	ProteinID:CCB49814.1	UniProt:F6HC56	EMBL:FN595514	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	EntrezGene:LOC100257059	wikigene:LOC100257059	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF24	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00015CA980	ArrayExpress:VIT_13s0067g02360	EnsemblPlantsGene:VIT_13s0067g02360	EnsemblPlants:VIT_13s0067g02360.t01	RefSeq:XP_002278996	RefSeq:XP_002278996.1
SEG:seg	:	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6HC56]

Coordinates

chr13:+:1304496..1306042

Molecular Weight (calculated)

34420.9 Da

IEP (calculated)

9.604

GRAVY (calculated)

-0.177

Length

321 amino acids

Sequence
(BLAST)

001: MASPSSYMAI VTMALLILFL GSSTAQLSTD YYSQSCPKLF PTVKSAVKSA VAKEARMGAS LLRLFFHDCF VNGCDGSVLL DDTSSFIGEK NAAPNANSVR
101: GFDVVDDIKS KVETACPGVV SCADVLAIAA RDSVVILGGP SWNVKLGRRD ARTASQAAAN NSIPPPTSNL NQLISRFQAL GLSTRDLVAL AGSHTIGQAR
201: CTSFRARIYN ETNIDNSFAK TRQSNCPRAS GSGDNNLAPL DLQTPTAFEN NYYKNLIKKK GLLHSDQQLF NGGSTDSIVR KYSNSRSNFN AHFVAGMIKM
301: GDISPLTGSN GEIRKNCRRV N

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.