Factsheet for VIT_06s0004g07750.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 7
plastid 1
cytosol 1
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30138	Soybean	extracellular	69.45	66.67
KRG98179	Soybean	extracellular	69.45	66.46
KRH72790	Soybean	endoplasmic reticulum	66.88	64.4
KRH72789	Soybean	extracellular, golgi	67.85	63.94
GSMUA_Achr9P04770_001	Banana	extracellular	58.84	63.54
KRG98180	Soybean	extracellular	64.95	62.73
VIT_08s0058g00970.t01	Wine grape	extracellular	52.73	62.36
VIT_18s0001g06890.t01	Wine grape	extracellular	51.77	61.22
VIT_06s0004g07740.t01	Wine grape	cytosol, extracellular, nucleus	51.45	60.84
TraesCS4B01G168100.1	Wheat	extracellular	62.38	60.25
TraesCS4A01G136600.1	Wheat	extracellular	63.34	60.24
TraesCS4D01G170600.1	Wheat	extracellular	63.02	60.12
VIT_08s0058g00980.t01	Wine grape	extracellular	50.8	60.08
VIT_12s0028g01830.t01	Wine grape	extracellular	51.77	58.97
Zm00001d047514_P001	Maize	extracellular	62.06	58.31
Os07t0677600-01	Rice	extracellular	60.13	58.26
HORVU7Hr1G116550.5	Barley	extracellular	61.74	58.01
KRH17143	Soybean	endoplasmic reticulum	66.88	57.94
VIT_08s0058g00990.t01	Wine grape	extracellular	58.84	57.55
VIT_18s0001g06850.t01	Wine grape	extracellular	57.56	56.47
VIT_18s0001g06840.t01	Wine grape	extracellular	57.23	55.97
VIT_06s0004g07770.t01	Wine grape	extracellular	56.91	55.14
TraesCS2D01G107300.1	Wheat	extracellular	56.59	54.83
TraesCS2A01G106700.1	Wheat	extracellular	56.59	54.83
VIT_12s0028g01840.t01	Wine grape	extracellular	55.63	54.57
TraesCS2B01G124300.1	Wheat	extracellular	56.27	54.52
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	55.95	54.21
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	45.98	53.76
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	45.98	53.76
Zm00001d022453_P001	Maize	extracellular	55.95	53.7
EER99906	Sorghum	extracellular	55.95	53.7
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	45.66	53.38
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	45.02	52.63
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	44.69	52.45
VIT_01s0010g02010.t01	Wine grape	plastid	50.8	52.32
OQU92637	Sorghum	extracellular	62.7	52.0
VIT_01s0010g02000.t01	Wine grape	extracellular	51.45	49.38

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100246743	wikigene:100246743	MapMan:35.1
EMBL:AM461967	ProteinID:CAN61439	ProteinID:CAN61439.1	ProteinID:CCB43415	ProteinID:CCB43415.1	UniProt:F6GUC8
EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0020037	GO:GO:0031083	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100246743
wikigene:LOC100246743	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF36	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI000210AC23	ArrayExpress:VIT_06s0004g07750	EnsemblPlantsGene:VIT_06s0004g07750
EnsemblPlants:VIT_06s0004g07750.t01	unigene:Vvi.23993	RefSeq:XP_002270068	RefSeq:XP_002270068.1	SEG:seg	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6GUC8]

Coordinates

chr6:-:8545354..8546653

Molecular Weight (calculated)

33672.2 Da

IEP (calculated)

5.364

GRAVY (calculated)

-0.044

Length

311 amino acids

Sequence
(BLAST)

001: MCFVVAAAIV IPISAQLSPD FYDKLCPQAL PTIRSILEKA IYHEPRLGAS LLRVHFHDCF VNGCDASVLL DDTPNFTGEK TAGPNLNSLR GFEVIDEIKE
101: AVNSACCGNV VSCADILAVA ARDSVAILGG PSYQVLLGRR DARTASLNDA NSDIPRPIFD FPALLSNFQN HGLDLNDLVL LSGGHTIGLA RCTNFRDRIY
201: NETNIKPKFA ASLRGICPKE GGDDNTATLD ATTANFDTEY FKDLLKLKGL LHSDQELFKG VGSASDGLVQ YYNNNPGAFF ADFGVSMIKM GNMKPLTGSD
301: GEIRMNCRKI N

Best Arabidopsis Sequence Match ( AT2G18150.1 )
(BLAST)

001: MARIGSFLII LYLIYALTLC ICDDDESNYG GDKGNLFPGF YRSSCPRAEE IVRSVVAKAV ARETRMAASL MRLHFHDCFV QGCDGSLLLD TSGSIVTEKN
101: SNPNSRSARG FEVVDEIKAA LENECPNTVS CADALTLAAR DSSVLTGGPS WMVPLGRRDS TSASLSGSNN NIPAPNNTFN TIVTRFNNQG LDLTDVVALS
201: GSHTIGFSRC TSFRQRLYNQ SGNGSPDRTL EQSYAANLRQ RCPRSGGDQN LSELDINSAG RFDNSYFKNL IENMGLLNSD EVLFSSNEQS RELVKKYAED
301: QEEFFEQFAE SMIKMGNISP LTGSSGEIRK NCRKINNS

Arabidopsis Description

PER15Peroxidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI16]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.