Factsheet for VIT_01s0010g01950.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 3
extracellular 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	96.62	96.98
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	88.35	88.35
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	87.97	87.97
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	86.47	86.47
VIT_01s0010g02010.t01	Wine grape	plastid	87.22	76.82
VIT_01s0010g02000.t01	Wine grape	extracellular	87.59	71.91
PGSC0003DMT400050890	Potato	cytosol	62.78	66.27
PGSC0003DMT400071003	Potato	cytosol, plastid	69.17	61.33
VIT_08s0058g00980.t01	Wine grape	extracellular	60.53	61.22
VIT_08s0058g00970.t01	Wine grape	extracellular	60.53	61.22
KRG91738	Soybean	endoplasmic reticulum, extracellular, vacuole	74.06	60.99
KRH29155	Soybean	extracellular	74.06	60.99
KRH35030	Soybean	extracellular	74.06	60.99
VIT_06s0004g07740.t01	Wine grape	cytosol, extracellular, nucleus	60.15	60.84
CDY53543	Canola	cytosol, extracellular	53.01	60.0
VIT_18s0001g06890.t01	Wine grape	extracellular	58.65	59.32
Solyc11g018800.1.1	Tomato	extracellular	68.8	57.37
PGSC0003DMT400039065	Potato	extracellular	68.42	57.05
VIT_12s0028g01830.t01	Wine grape	extracellular	57.89	56.41
CDX81650	Canola	extracellular	65.41	55.06
CDY65372	Canola	extracellular	65.04	54.57
AT1G14550.1	Thale cress	extracellular	65.79	54.52
Bra026822.1-P	Field mustard	extracellular	58.65	54.17
Bra026207.1-P	Field mustard	extracellular	64.29	53.94
CDY66455	Canola	extracellular	64.29	53.94
GSMUA_Achr4P05250_001	Banana	extracellular	60.15	53.69
AT1G14540.1	Thale cress	extracellular	62.78	53.02
VIT_06s0004g07770.t01	Wine grape	extracellular	63.16	52.34
VIT_18s0001g06840.t01	Wine grape	extracellular	61.28	51.26
VIT_18s0001g06850.t01	Wine grape	extracellular	60.15	50.47
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	59.77	49.53
VIT_12s0028g01840.t01	Wine grape	extracellular	58.27	48.9
VIT_08s0058g00990.t01	Wine grape	extracellular	56.02	46.86
VIT_06s0004g07750.t01	Wine grape	extracellular	52.63	45.02

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	ProteinID:CCB51215	ProteinID:CCB51215.1
UniProt:F6HG22	EMBL:FN595754	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF37	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI00021098B9	ArrayExpress:VIT_01s0010g01950
EnsemblPlantsGene:VIT_01s0010g01950	EnsemblPlants:VIT_01s0010g01950.t01	SEG:seg	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6HG22]

Coordinates

chr1:-:18605528..18606652

Molecular Weight (calculated)

28600.7 Da

IEP (calculated)

8.044

GRAVY (calculated)

-0.194

Length

266 amino acids

Sequence
(BLAST)

001: MAASLIRLHF HDCFVQGCDA SILLDDSSSI QSEKNAPNNL NSVRGYEVID NIKSKVESLC PGVVSCADIV AVAARDASVA VSGPTWTVRL GRRDSTTSGL
101: SQAATNLPSF RDSLDKLVSL FGSKGLSARD MVALSGSHTI GQARCVTFRD RIYDNGTDID AGFASTRRRR CPANNGNGDD NLAPLELVTP NSFDNNYFKN
201: LIRRKGLLQS DQVLFSGGST DTIVNEYSKS PKTFRSDFAS AMVKMGDIEA LTGSAGVIRK FCNVIN

Best Arabidopsis Sequence Match ( AT1G14540.1 )
(BLAST)

001: MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN

Arabidopsis Description

PER4Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WND9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.