Factsheet for PGSC0003DMT400050890

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071003	Potato	cytosol, plastid	81.75	68.67
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	68.65	65.04
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	68.25	64.66
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	68.25	64.66
PGSC0003DMT400039065	Potato	extracellular	81.75	64.58
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	66.67	63.4
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	66.27	62.78
VIT_01s0010g02010.t01	Wine grape	plastid	68.65	57.28
PGSC0003DMT400052649	Potato	cytosol	48.81	54.91
KRH29155	Soybean	extracellular	69.84	54.49
CDY53543	Canola	cytosol, extracellular	50.79	54.47
KRH35030	Soybean	extracellular	69.44	54.18
PGSC0003DMT400053615	Potato	cytosol	53.57	54.0
PGSC0003DMT400053613	Potato	cytosol	53.57	54.0
KRG91738	Soybean	endoplasmic reticulum, extracellular, vacuole	69.05	53.87
VIT_01s0010g02000.t01	Wine grape	extracellular	67.46	52.47
AT1G14550.1	Thale cress	extracellular	63.89	50.16
PGSC0003DMT400053611	Potato	cytosol	34.13	48.04
CDY66455	Canola	extracellular	59.52	47.32
GSMUA_Achr4P05250_001	Banana	extracellular	55.95	47.32
PGSC0003DMT400053618	Potato	plastid	55.95	47.0
AT1G14540.1	Thale cress	extracellular	58.73	46.98
CDY65372	Canola	extracellular	58.73	46.69
Bra026207.1-P	Field mustard	extracellular	58.33	46.37
CDX81650	Canola	extracellular	57.94	46.2
PGSC0003DMT400040868	Potato	extracellular	58.33	46.08
PGSC0003DMT400030402	Potato	extracellular	58.73	45.96
PGSC0003DMT400031195	Potato	cytosol	54.37	45.82
PGSC0003DMT400068341	Potato	extracellular	56.35	44.94
PGSC0003DMT400036487	Potato	extracellular	55.95	44.2
Bra026822.1-P	Field mustard	extracellular	50.4	44.1
PGSC0003DMT400078121	Potato	extracellular	51.59	41.67
PGSC0003DMT400018003	Potato	extracellular	44.44	41.03
PGSC0003DMT400017114	Potato	extracellular	40.48	40.16

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1BR12
PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400019766	PGSC:PGSC0003DMG400019766	EnsemblPlants:PGSC0003DMT400050890	PRINTS:PR00458	PRINTS:PR00461
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF37	InterPro:Peroxidase_pln	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
UniParc:UPI000296B13B	SEG:seg	:	:	:	:

Description

Lignin-forming anionic peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400019766]

Coordinates

chr11:-:20684710..20686486

Molecular Weight (calculated)

26856.6 Da

IEP (calculated)

4.662

GRAVY (calculated)

-0.173

Length

252 amino acids

Sequence
(BLAST)

001: MFTHGCDASI LLNETTSIVS EKTVLPNLGS VRGYGVIEDA KAEIEKICPG VVSCADILAV AARDASAAVG GPSWTVKLGR RDSTTTSKTV AETDLPNPFD
101: PLDTLISGFA NKGLNTRDMV ALSGPHSIGQ AQCFLFRDRI YDNGTNIDTG FASTRRRACP QEGENGNLAP LDLVTPNQLD NNYFKNLIDE KGLLQSDQLL
201: FNGGSTDNIV TEYSNSPRAF SSDFTAAMIK MGDITPLTGK NGIIRSVCAS VN

Best Arabidopsis Sequence Match ( AT1G14540.1 )
(BLAST)

001: MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN

Arabidopsis Description

PER4Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WND9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.