Factsheet for PGSC0003DMT400071003

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039065	Potato	extracellular	94.0	88.4
PGSC0003DMT400050890	Potato	cytosol	68.67	81.75
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	63.33	71.43
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	63.33	71.43
VIT_01s0010g02010.t01	Wine grape	plastid	71.67	71.19
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	62.33	70.57
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	62.33	70.3
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	61.33	69.17
KRH29155	Soybean	extracellular	73.0	67.8
KRG91738	Soybean	endoplasmic reticulum, extracellular, vacuole	72.0	66.87
KRH35030	Soybean	extracellular	72.0	66.87
VIT_01s0010g02000.t01	Wine grape	extracellular	72.0	66.67
AT1G14550.1	Thale cress	extracellular	67.67	63.24
CDY66455	Canola	extracellular	64.67	61.2
CDY65372	Canola	extracellular	64.33	60.88
CDX81650	Canola	extracellular	64.0	60.76
Bra026207.1-P	Field mustard	extracellular	64.0	60.57
AT1G14540.1	Thale cress	extracellular	63.33	60.32
Bra026822.1-P	Field mustard	extracellular	57.0	59.38
CDY53543	Canola	cytosol, extracellular	44.67	57.02
GSMUA_Achr4P05250_001	Banana	extracellular	56.33	56.71
PGSC0003DMT400068341	Potato	extracellular	59.0	56.01
PGSC0003DMT400052649	Potato	cytosol	41.33	55.36
PGSC0003DMT400053618	Potato	plastid	55.33	55.33
PGSC0003DMT400031195	Potato	cytosol	54.67	54.85
PGSC0003DMT400053613	Potato	cytosol	45.33	54.4
PGSC0003DMT400030402	Potato	extracellular	58.33	54.35
PGSC0003DMT400040868	Potato	extracellular	57.67	54.23
PGSC0003DMT400053615	Potato	cytosol	44.67	53.6
PGSC0003DMT400036487	Potato	extracellular	56.33	52.98
PGSC0003DMT400018003	Potato	extracellular	48.0	52.75
PGSC0003DMT400078121	Potato	extracellular	54.0	51.92
PGSC0003DMT400017114	Potato	extracellular	42.0	49.61
PGSC0003DMT400053611	Potato	cytosol	29.33	49.16

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:M1CN26	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400027614	PGSC:PGSC0003DMG400027614	EnsemblPlants:PGSC0003DMT400071003
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388
PANTHER:PTHR31388:SF37	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
UniParc:UPI000296A4D2	:	:	:	:	:

Description

Cell wall peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400027614]

Coordinates

chr11:-:12404341..12405565

Molecular Weight (calculated)

32443.5 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.196

Length

300 amino acids

Sequence
(BLAST)

001: MQCHAQLSST FYDRTCPNAL TTIRTSIRQA ISRERRMAAS LIRLHFHDCF VQGCDASLLL DETPTIVSEK TALPNLGSVR GFGIIEDAKR EVEKTCPGIV
101: SCADILAVAA RDASTLVGGP SWTVKLGRRD STTASHTLAE TDLPGPFDPL SRLISGFANK GLSTRDMVAL SGSHSIGQAQ CFLFRDRIYG NGTDIDAGFA
201: STRRRQCPQE DQNGNLAPLD LVTPNQLDNN YFKNLRQRKG LLQSDQVLLS GGSTDDIVLE YSNSPRAFAS DFAAAMIKMG DISPLTGQNG IIRTVCGAIN

Best Arabidopsis Sequence Match ( AT1G14550.1 )
(BLAST)

001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N

Arabidopsis Description

PER5Peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Q9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.