CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026822.1-P	Field mustard	extracellular	88.92	97.57
CDY65372	Canola	extracellular	95.89	95.58
CDY66455	Canola	extracellular	94.62	94.32
AT1G14540.1	Thale cress	extracellular	92.41	92.7
CDY53543	Canola	cytosol, extracellular	68.04	91.49
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	56.65	67.29
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	55.38	66.04
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	55.38	65.79
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	55.38	65.79
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	55.06	65.41
KRG91738	Soybean	endoplasmic reticulum, extracellular, vacuole	66.77	65.33
VIT_01s0010g02010.t01	Wine grape	plastid	61.71	64.57
PGSC0003DMT400071003	Potato	cytosol, plastid	60.76	64.0
VIT_01s0010g02000.t01	Wine grape	extracellular	65.19	63.58
KRH29155	Soybean	extracellular	64.87	63.47
KRH35030	Soybean	extracellular	64.56	63.16
PGSC0003DMT400039065	Potato	extracellular	61.71	61.13
Solyc11g018800.1.1	Tomato	extracellular	61.39	60.81
PGSC0003DMT400050890	Potato	cytosol	46.2	57.94
GSMUA_Achr4P05250_001	Banana	extracellular	51.27	54.36
CDY04948	Canola	extracellular	55.06	53.7
CDY14118	Canola	extracellular	54.75	53.4
CDX70158	Canola	extracellular	52.85	51.38
CDX98835	Canola	extracellular	52.85	51.38
CDY32701	Canola	extracellular	51.27	49.69
CDY52147	Canola	extracellular	50.95	49.69
CDY02817	Canola	cytosol	50.0	49.38
CDY71390	Canola	cytosol	39.87	49.22
CDY02820	Canola	extracellular	50.63	49.08
CDX80957	Canola	extracellular	50.32	49.07
CDX88673	Canola	extracellular	48.73	42.08

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078CXV5	EnsemblPlants:CDX81650
ProteinID:CDX81650	ProteinID:CDX81650.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00136563001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF37	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
UniParc:UPI0004EDBDBC	SEG:seg	:	:	:	:

Description

BnaC08g39510D

Coordinates

chrLK031826:-:169080..170568

Molecular Weight (calculated)

34232.6 Da

IEP (calculated)

7.873

GRAVY (calculated)

-0.060

Length

316 amino acids

Sequence
(BLAST)

001: MAIFKIIVLL LSLFCFCQAQ LSPTFYDQSC PNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSVANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYAVKV GRRDSTTAFR AIADSGDLPS FRASLDDLSD LFLRKGLNTR DLVALSGAHT LGQATCVTFK
201: ERLYDNSSDI DAGFSSTRKR RCPVNGGDTN LAPLDQVTPN SFDNNYYRNL MQKKGLLASD QVLFGSGAST DSIVSEYSRN PSRFASDYAA AMIKMGDIQT
301: LTGSAGQIRR ICTAVN

Best Arabidopsis Sequence Match ( AT1G14540.1 )
(BLAST)

001: MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN

Arabidopsis Description

PER4Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WND9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.