Factsheet for Solyc11g018800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039065	Potato	extracellular	97.18	97.18
VIT_01s0010g02010.t01	Wine grape	plastid	67.71	71.52
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	58.93	70.68
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	58.93	70.68
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	58.31	70.19
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	58.31	69.92
KRH35030	Soybean	extracellular	69.91	69.04
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	57.37	68.8
KRG91738	Soybean	endoplasmic reticulum, extracellular, vacuole	69.59	68.73
KRH29155	Soybean	extracellular	69.59	68.73
VIT_01s0010g02000.t01	Wine grape	extracellular	69.28	68.21
AT1G14550.1	Thale cress	extracellular	63.95	63.55
CDY66455	Canola	extracellular	61.76	62.15
CDY65372	Canola	extracellular	61.44	61.83
Bra026207.1-P	Field mustard	extracellular	61.13	61.51
CDX81650	Canola	extracellular	60.81	61.39
AT1G14540.1	Thale cress	extracellular	60.19	60.95
Bra026822.1-P	Field mustard	extracellular	54.86	60.76
GSMUA_Achr4P05250_001	Banana	extracellular	53.92	57.72
CDY53543	Canola	cytosol, extracellular	42.32	57.45
Solyc03g025380.2.1	Tomato	extracellular	54.86	54.69
Solyc05g050880.2.1	Tomato	extracellular	54.23	54.57
Solyc05g052280.2.1	Tomato	extracellular	54.86	54.35
Solyc06g082420.2.1	Tomato	extracellular	52.35	53.53
Solyc09g018590.1.1	Tomato	extracellular	41.69	53.2
Solyc06g050440.2.1	Tomato	extracellular	52.98	52.98
Solyc10g076240.1.1	Tomato	nucleus	52.35	52.68
Solyc10g076210.1.1	Tomato	extracellular	52.35	52.35
Solyc10g076190.1.1	Tomato	extracellular	52.04	51.88
Solyc10g076220.1.1	Tomato	extracellular	51.41	51.41
Solyc07g055190.2.1	Tomato	extracellular	49.53	49.53
Solyc10g075120.1.1	Tomato	extracellular	32.6	47.49

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4D6T3	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF37	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc11g018800.1	EnsemblPlants:Solyc11g018800.1.1
UniParc:UPI000276AA7D	:	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4D6T3]

Coordinates

chr11:-:9597159..9598442

Molecular Weight (calculated)

34363.9 Da

IEP (calculated)

6.973

GRAVY (calculated)

-0.097

Length

319 amino acids

Sequence
(BLAST)

001: MTTSKNSFVA IFSLLLLSSM QCHAQLSSTF YDRTCPTALT TIRTSIRQAV SSERRMAASL IRLHFHDCFV QGCDASILLD ETPTIVSEKT ALPNLGSARG
101: YGIIEDAKRE LEKTCPGIVS CADILAVAAR DASTLVGGPS WTVKLGRRDS ATASHTLAET DLPGPFDPLD RLISGFANKG LSTRDMVALS GSHSIGQAQC
201: FLFRDRIYSN GTDIDAGFAS TRRRQCPQED QNGNLAPLDL VTPNQLDNNY YKNLIQRKGL LQSDQVLLSG GSTDSIVTEY SNSPRVFAAD FAAAMIKMGD
301: ISPLTGQNGI IRTVCGAIN

Best Arabidopsis Sequence Match ( AT1G14550.1 )
(BLAST)

001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N

Arabidopsis Description

PER5Peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Q9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.