Factsheet for Solyc10g076240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g076220.1.1	Tomato	extracellular	83.6	83.07
Solyc10g076210.1.1	Tomato	extracellular	83.6	83.07
Solyc10g076190.1.1	Tomato	extracellular	82.33	81.56
VIT_08s0058g00990.t01	Wine grape	extracellular	75.08	74.84
Solyc10g075120.1.1	Tomato	extracellular	50.47	73.06
KRH65472	Soybean	plastid	64.98	67.76
KRH76088	Soybean	extracellular	67.82	67.4
KRH65470	Soybean	extracellular	67.51	67.08
KRH65471	Soybean	extracellular	67.19	66.77
KRH76091	Soybean	extracellular	66.88	66.46
KRH65467	Soybean	extracellular	66.25	65.42
KRH65474	Soybean	extracellular	66.56	65.12
KRH65476	Soybean	extracellular, vacuole	64.04	63.64
KRH65475	Soybean	extracellular	64.35	63.55
Solyc06g050440.2.1	Tomato	extracellular	59.62	59.25
Solyc05g052280.2.1	Tomato	extracellular	59.62	58.7
Solyc06g082420.2.1	Tomato	extracellular	56.78	57.69
GSMUA_Achr9P04770_001	Banana	extracellular	52.37	57.64
TraesCS4A01G136600.1	Wheat	extracellular	57.41	55.66
Solyc05g050880.2.1	Tomato	extracellular	55.2	55.2
TraesCS4D01G170600.1	Wheat	extracellular	56.15	54.6
TraesCS4B01G168100.1	Wheat	extracellular	55.2	54.35
HORVU7Hr1G116550.5	Barley	extracellular	56.47	54.08
Solyc03g025380.2.1	Tomato	extracellular	54.26	53.75
EER99906	Sorghum	extracellular	54.89	53.7
Zm00001d047514_P001	Maize	extracellular	55.52	53.17
Os07t0677600-01	Rice	extracellular	53.63	52.96
Solyc11g018800.1.1	Tomato	extracellular	52.68	52.35
TraesCS2B01G124300.1	Wheat	extracellular	52.68	52.02
Zm00001d022453_P001	Maize	extracellular	53.0	51.85
TraesCS2D01G107300.1	Wheat	extracellular	52.37	51.71
TraesCS2A01G106700.1	Wheat	extracellular	52.05	51.4
Solyc09g018590.1.1	Tomato	extracellular	40.38	51.2
Solyc07g055190.2.1	Tomato	extracellular	51.42	51.1
OQU92637	Sorghum	extracellular	57.41	48.53

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4D1W6	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF30	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc10g076240.1	EnsemblPlants:Solyc10g076240.1.1
TMHMM:TMhelix	UniParc:UPI0002769BFA	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4D1W6]

Coordinates

chr10:-:59082990..59084119

Molecular Weight (calculated)

35181.4 Da

IEP (calculated)

9.975

GRAVY (calculated)

-0.274

Length

317 amino acids

Sequence
(BLAST)

001: MASRSFLFIY VLVMFCLAGM AFSELSDDFY HHICPKALPT IKRVVVDAVR KERRMGASLL RLHFHDCFVN GCDASILLDQ TSTINSEKTS RANNNSARGF
101: EVIDKIKSEV DKVCGRPVVS CADILAVAAR DSVVALHGPS WKVKLGRRDS TTASRTAANN NIPTPFMDLP ALIKNFKKQG LDEKDLVALS GGHTLGFAQC
201: FTFRNRIYNE TTIDPTFRRQ RQANCPRSGG DSNLAPLDPT PALFDSKYFS DLRSKKGLLH SDQALFSGGK TDDLVEKYSK DLGMFSKDFA QSMIKMGNIK
301: PLTGKRGQIR VNCRKVN

Best Arabidopsis Sequence Match ( AT1G14550.1 )
(BLAST)

001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N

Arabidopsis Description

PER5Peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Q9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.