Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400053611 Potato cytosol 50.23 61.45
Solyc10g076220.1.1 Tomato extracellular 84.02 57.68
Solyc10g076210.1.1 Tomato extracellular 82.65 56.74
Solyc10g076190.1.1 Tomato extracellular 81.28 55.62
PGSC0003DMT400031195 Potato cytosol 74.43 54.52
Solyc10g076240.1.1 Tomato nucleus 73.06 50.47
PGSC0003DMT400017114 Potato extracellular 55.71 48.03
VIT_08s0058g00990.t01 Wine grape extracellular 63.93 44.03
KRH76088 Soybean extracellular 60.27 41.38
KRH65472 Soybean plastid 56.62 40.79
KRH65470 Soybean extracellular 59.36 40.75
KRH65471 Soybean extracellular 59.36 40.75
KRH65475 Soybean extracellular 59.36 40.5
KRH76091 Soybean extracellular 58.9 40.44
KRH65467 Soybean extracellular 58.45 39.88
KRH65474 Soybean extracellular 58.45 39.51
GSMUA_Achr9P04770_001 Banana extracellular 51.6 39.24
KRH65476 Soybean extracellular, vacuole 55.25 37.93
Solyc06g050440.2.1 Tomato extracellular 52.51 36.05
TraesCS2D01G107300.1 Wheat extracellular 51.14 34.89
TraesCS2A01G106700.1 Wheat extracellular 51.14 34.89
TraesCS4A01G136600.1 Wheat extracellular 52.05 34.86
TraesCS4D01G170600.1 Wheat extracellular 51.6 34.66
TraesCS2B01G124300.1 Wheat extracellular 50.68 34.58
Os07t0677600-01 Rice extracellular 50.68 34.58
Solyc05g052280.2.1 Tomato extracellular 50.68 34.47
HORVU7Hr1G116550.5 Barley extracellular 52.05 34.44
Zm00001d022453_P001 Maize extracellular 50.68 34.26
Solyc06g082420.2.1 Tomato extracellular 48.4 33.97
Zm00001d047514_P001 Maize extracellular 51.14 33.84
Solyc05g050880.2.1 Tomato extracellular 48.86 33.75
EER99906 Sorghum extracellular 49.77 33.64
TraesCS4B01G168100.1 Wheat extracellular 48.4 32.92
Solyc11g018800.1.1 Tomato extracellular 47.49 32.6
Solyc09g018590.1.1 Tomato extracellular 36.99 32.4
Solyc03g025380.2.1 Tomato extracellular 45.66 31.25
OQU92637 Sorghum extracellular 52.97 30.93
Solyc07g055190.2.1 Tomato extracellular 42.47 29.15
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1GO:GO:0003674GO:GO:0003824
GO:GO:0004601GO:GO:0005488GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0020037GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016UniProt:K4D1V3PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00436
PFscan:PS50873PANTHER:PTHR31388PANTHER:PTHR31388:SF30InterPro:Peroxidase_plnInterPro:Peroxidases_ASSUPFAM:SSF48113
SignalP:SignalP-noTMEnsemblPlantsGene:Solyc10g075120.1EnsemblPlants:Solyc10g075120.1.1TMHMM:TMhelixUniParc:UPI0002769BED:
Description
No Description!
Coordinates
chr10:+:58847992..58848834
Molecular Weight (calculated)
24340.9 Da
IEP (calculated)
5.270
GRAVY (calculated)
0.006
Length
219 amino acids
Sequence
(BLAST)
001: MASSYSFVFL HVLVIFCLAH TAFSDLSDDF YDDICPQALP TIRRVVEDAI SQERRMGTSL LRLHFHDCFV NGCDASIPLD QTATIDSEKT ALANNNSARG
101: FEVIDRIKSE VDKVCGRPVI SCADILAVAA CDSVVALHGP TWEVELGRRD STTASRTIAD NDIPTPFRDL STLVDNFKKQ GLDEEDLVAL SGAHTHQTKL
201: LYRIIHQNNI FIKNFIKLV
Best Arabidopsis Sequence Match ( AT1G14540.1 )
(BLAST)
001: MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN
Arabidopsis Description
PER4Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WND9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.