Factsheet for Solyc06g050440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 26583031
extracellular: 28847647
extracellular: 29876421

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

msms PMID: 28847647 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA. Electronic address: jabadia@eead.csic.es.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036487	Potato	extracellular	97.81	97.81
Solyc05g052280.2.1	Tomato	extracellular	86.21	85.4
KRH64171	Soybean	extracellular	78.06	77.81
KRH53775	Soybean	extracellular	77.74	77.5
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	74.92	74.45
KRH73217	Soybean	nucleus	74.61	73.46
AT5G05340.1	Thale cress	extracellular	73.04	71.91
KRH14872	Soybean	nucleus	73.04	71.47
CDX70158	Canola	extracellular	71.16	69.85
CDX98835	Canola	extracellular	70.53	69.23
CDY14118	Canola	extracellular	70.22	69.14
Bra009105.1-P	Field mustard	extracellular	59.56	68.59
Bra028761.1-P	Field mustard	extracellular	69.59	68.52
CDY04948	Canola	extracellular	69.59	68.52
CDY52147	Canola	extracellular	64.26	63.27
Bra005850.1-P	Field mustard	extracellular	64.26	63.27
CDX80957	Canola	extracellular	63.95	62.96
Solyc03g025380.2.1	Tomato	extracellular	62.38	62.19
Solyc05g050880.2.1	Tomato	extracellular	61.13	61.51
Solyc09g018590.1.1	Tomato	extracellular	47.96	61.2
Solyc06g082420.2.1	Tomato	extracellular	58.62	59.94
Solyc10g076240.1.1	Tomato	nucleus	59.25	59.62
Solyc10g076210.1.1	Tomato	extracellular	58.31	58.31
Solyc10g076190.1.1	Tomato	extracellular	58.31	58.12
Solyc07g055190.2.1	Tomato	extracellular	57.37	57.37
Solyc10g076220.1.1	Tomato	extracellular	57.37	57.37
Solyc11g018800.1.1	Tomato	extracellular	52.98	52.98
Solyc10g075120.1.1	Tomato	extracellular	36.05	52.51

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4C5I8	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF24	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc06g050440.2	EnsemblPlants:Solyc06g050440.2.1
TMHMM:TMhelix	UniParc:UPI0002766B15	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4C5I8]

Coordinates

chr6:-:33051778..33054091

Molecular Weight (calculated)

34568.2 Da

IEP (calculated)

9.696

GRAVY (calculated)

-0.154

Length

319 amino acids

Sequence
(BLAST)

001: MACFKSAIVL FFLVTLVGSS SAQLTTGFYS KSCPKLYQTV KSVVNSAIQK ETRMGASLLR LFFHDCFVNG CDGSLFLDDT STFTGEKRAQ PNFNSARGFE
101: VIDNIKSAVE KVCLGVVSCA DILAVTARDS VVILGGPNWD VKLGRRDART ASQGAANNSI PTPTSNLNRL ISSFTAVGLS TKDMVALSGA HTIGQARCTS
201: FRGRIYNETK NMDASLARTR QNNCPRASGS GDNNLAPLDL QTPTRFDNHY FINLVNKKGL LHSDQQLFNG GSVDSIVKSY SNNPSSFISD FVTAMIKMGD
301: IRPLTGSNGE IRKNCRRIN

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.