Factsheet for AT5G05340.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 8
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028761.1-P	Field mustard	extracellular	89.81	89.81
CDY14118	Canola	extracellular	89.81	89.81
CDY04948	Canola	extracellular	89.51	89.51
CDX70158	Canola	extracellular	89.51	89.23
CDX98835	Canola	extracellular	89.51	89.23
Bra009105.1-P	Field mustard	extracellular	75.31	88.09
KRH53775	Soybean	extracellular	76.54	77.5
KRH64171	Soybean	extracellular	76.54	77.5
Solyc05g052280.2.1	Tomato	extracellular	75.62	76.09
PGSC0003DMT400030402	Potato	extracellular	75.0	75.47
Solyc06g050440.2.1	Tomato	extracellular	71.91	73.04
PGSC0003DMT400036487	Potato	extracellular	71.91	73.04
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	72.22	72.9
KRH73217	Soybean	nucleus	70.68	70.68
KRH14872	Soybean	nucleus	69.75	69.33
AT5G58400.1	Thale cress	extracellular	61.42	61.23
AT5G58390.1	Thale cress	extracellular	58.64	60.13
AT1G14550.1	Thale cress	extracellular	54.63	55.14
AT1G14540.1	Thale cress	extracellular	53.4	54.92

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EntrezGene:830416	ProteinID:AED90861.1
ArrayExpress:AT5G05340	EnsemblPlantsGene:AT5G05340	RefSeq:AT5G05340	TAIR:AT5G05340	RefSeq:AT5G05340-TAIR-G	EnsemblPlants:AT5G05340.1
TAIR:AT5G05340.1	EMBL:AY065270	Unigene:At.28537	ProteinID:BAB09977.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009809
GO:GO:0009987	GO:GO:0010089	GO:GO:0016491	GO:GO:0019748	GO:GO:0020037	GO:GO:0030312
GO:GO:0042744	GO:GO:0046872	GO:GO:0048046	GO:GO:0055114	GO:GO:0098869	GO:GO:1901430
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	RefSeq:NP_196153.1	PFAM:PF00141	PO:PO:0001185
PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009001	PO:PO:0009009	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009047	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388
PANTHER:PTHR31388:SF24	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	UniProt:Q9FLC0	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI0000048ACD	SEG:seg	:	:

Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]

Coordinates

chr5:-:1578869..1580875

Molecular Weight (calculated)

34217.3 Da

IEP (calculated)

8.396

GRAVY (calculated)

-0.058

Length

324 amino acids

Sequence
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.